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DOID:3350: Difference between revisions

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|name=mesenchymal cell neoplasm
|name=mesenchymal cell neoplasm
|namespace=disease_ontology
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=
|part_of=

Latest revision as of 16:50, 12 September 2014

Name:mesenchymal cell neoplasm
Namespace:FANTOM
Definition:"A cell type cancer that has_material_basis_in abnormally proliferating cells derived_from embryonic connective tissue that is capable of developing into connective tissue, such as bone, and cartilage, the lymphatic system, and the circulatory system." [url:http://en.wikipedia.org/wiki/Mesenchymal_cell, url:http://www.ncbi.nlm.nih.gov/books/NBK9549/]
Xrefs:
links:

NCI:C6587
UMLS_CUI:C1332517

UMLS_CUI:C1334699
Synonyms: "benign miscellaneous mesenchymal tumor" EXACT []
"mesenchymal tumor" EXACT [NCI2004_11_17:C7059]
Alt_id: DOID:1630

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:0050687(cell type cancer)



Children


is a:FF:10778-110G4 (hepatic mesenchymal tumor cell line:LI90),DOID:6193 (epithelioid sarcoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3350 (mesenchymal cell neoplasm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data