UBERON:0000178: Difference between revisions
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|located_in= | |located_in= | ||
|name=blood | |name=blood | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002390;;UBERON:0004535 | |part_of=UBERON:0002390;;UBERON:0004535 | ||
Latest revision as of 17:07, 12 September 2014
| Name: | blood | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Circulating body substance which consists of blood plasma and hemoglobin-carrying red blood cells. Excludes blood analogues (see UBERON:0000179 haemolymphatic fluid)." [FMA:9670, Wikipedia:Blood] | ||
| Xrefs: |
| ||
| Synonyms: |
"portion of blood" EXACT [] "vertebrate blood" EXACT [] "whole blood" RELATED [BTO:0000089] | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000179(haemolymphatic fluid) |
|---|---|
| part_of: | UBERON:0002390(hematopoietic system),UBERON:0004535(cardiovascular system) |
Children
| is a: | UBERON:0012168 (umbilical cord blood) |
|---|---|
| derives from: | FF:0000135 (human peripheral blood mononuclear cell sample),FF:0010053 (human blood - adult sample) |
| part of: | FF:0000135 (human peripheral blood mononuclear cell sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10053-101G8 (blood, adult, pool1)
- 10449-106F8 (cord blood derived cell line:COBL-a untreated)
- 10452-106G2 (cord blood derived cell line:COBL-a 24h infection(-C))
- 10453-106G3 (cord blood derived cell line:COBL-a 24h infection)
- 11231-116C7 (Peripheral Blood Mononuclear Cells, donor1)
- 11312-117C7 (Peripheral Blood Mononuclear Cells, donor2)
- 11388-118C2 (Peripheral Blood Mononuclear Cells, donor3)
- 12152-128G1
- 12153-128G2
- 12154-128G3
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000178 (blood), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.41e-121 | FFCP PHASE2:Hg19::chr1:205236716..205236728,+#_5cbe71b024cd9b3d07a70360b7704051 | p13@TMCC2 |
| 2.41e-121 | FFCP PHASE1:Hg19::chr1:205236716..205236728,+#_5cbe71b024cd9b3d07a70360b7704051 | p13@TMCC2 |
| 2.31e-117 | FFCP PHASE1:Hg19::chr4:74847473..74847482,-#_de789d58213172b8ef78611f5411b5a6 | p@chr4:74847473..74847482, - |
| 2.31e-117 | FFCP PHASE2:Hg19::chr14:75444134..75444136,-#_de789d58213172b8ef78611f5411b5a6 | p@chr14:75444134..75444136, - |
| 2.31e-117 | FFCP PHASE2:Hg19::chr20:54933899..54933911,+#_de789d58213172b8ef78611f5411b5a6 | p7@FAM210B |
| 2.31e-117 | FFCP PHASE2:Hg19::chr9:38090057..38090092,+#_de789d58213172b8ef78611f5411b5a6 | p@chr9:38090057..38090092, + |
| 2.31e-117 | FFCP PHASE2:Hg19::chr11:125491251..125491253,-#_de789d58213172b8ef78611f5411b5a6 | p@chr11:125491251..125491253, - |
| 2.31e-117 | FFCP PHASE1:Hg19::chr9:38090057..38090092,+#_de789d58213172b8ef78611f5411b5a6 | p@chr9:38090057..38090092, + |
| 2.31e-117 | FFCP PHASE1:Hg19::chr16:31539534..31539538,+#_de789d58213172b8ef78611f5411b5a6 | p4@AHSP |
| 2.31e-117 | FFCP PHASE2:Hg19::chr2:192318775..192318777,-#_de789d58213172b8ef78611f5411b5a6 | p@chr2:192318775..192318777, - |
| 2.31e-117 | FFCP PHASE2:Hg19::chr2:127434629..127434640,+#_de789d58213172b8ef78611f5411b5a6 | p@chr2:127434629..127434640, + |
| 2.31e-117 | FFCP PHASE1:Hg19::chr11:118962235..118962238,+#_de789d58213172b8ef78611f5411b5a6 | p5@HMBS |
| 2.31e-117 | FFCP PHASE1:Hg19::chr12:111678218..111678221,+#_de789d58213172b8ef78611f5411b5a6 | p@chr12:111678218..111678221, + |
| 2.31e-117 | FFCP PHASE1:Hg19::chr11:125491251..125491253,-#_de789d58213172b8ef78611f5411b5a6 | p@chr11:125491251..125491253, - |
| 2.31e-117 | FFCP PHASE1:Hg19::chr16:29810067..29810071,+#_de789d58213172b8ef78611f5411b5a6 | p@chr16:29810067..29810071, + |
| 2.31e-117 | FFCP PHASE1:Hg19::chr7:44973137..44973140,-#_de789d58213172b8ef78611f5411b5a6 | p@chr7:44973137..44973140, - |
| 2.31e-117 | FFCP PHASE1:Hg19::chr14:81627978..81627994,-#_de789d58213172b8ef78611f5411b5a6 | p@chr14:81627978..81627994, - |
| 2.31e-117 | FFCP PHASE1:Hg19::chr14:75444134..75444136,-#_de789d58213172b8ef78611f5411b5a6 | p@chr14:75444134..75444136, - |
| 2.31e-117 | FFCP PHASE2:Hg19::chr11:118962235..118962238,+#_de789d58213172b8ef78611f5411b5a6 | p5@HMBS |
| 2.31e-117 | FFCP PHASE1:Hg19::chr20:54933899..54933911,+#_de789d58213172b8ef78611f5411b5a6 | p7@FAM210B |
| 2.31e-117 | FFCP PHASE2:Hg19::chr12:111678218..111678221,+#_de789d58213172b8ef78611f5411b5a6 | p@chr12:111678218..111678221, + |
| 2.31e-117 | FFCP PHASE1:Hg19::chr14:65501285..65501318,+#_de789d58213172b8ef78611f5411b5a6 | p@chr14:65501285..65501318, + |
| 2.31e-117 | FFCP PHASE2:Hg19::chr14:65501285..65501318,+#_de789d58213172b8ef78611f5411b5a6 | p@chr14:65501285..65501318, + |
| 2.31e-117 | FFCP PHASE2:Hg19::chr16:31539534..31539538,+#_de789d58213172b8ef78611f5411b5a6 | p4@AHSP |
| 2.31e-117 | FFCP PHASE2:Hg19::chr7:44973137..44973140,-#_de789d58213172b8ef78611f5411b5a6 | p@chr7:44973137..44973140, - |
| 2.31e-117 | FFCP PHASE2:Hg19::chr11:61044581..61044587,-#_de789d58213172b8ef78611f5411b5a6 | p@chr11:61044581..61044587, - |
| 2.31e-117 | FFCP PHASE1:Hg19::chr11:61044581..61044587,-#_de789d58213172b8ef78611f5411b5a6 | p@chr11:61044581..61044587, - |
| 2.31e-117 | FFCP PHASE2:Hg19::chr4:74847473..74847482,-#_de789d58213172b8ef78611f5411b5a6 | p@chr4:74847473..74847482, - |
| 2.31e-117 | FFCP PHASE1:Hg19::chr2:192318775..192318777,-#_de789d58213172b8ef78611f5411b5a6 | p@chr2:192318775..192318777, - |
| 2.31e-117 | FFCP PHASE1:Hg19::chr12:829787..829796,-#_de789d58213172b8ef78611f5411b5a6 | p@chr12:829787..829796, - |
| 2.31e-117 | FFCP PHASE2:Hg19::chr17:42336860..42336865,-#_de789d58213172b8ef78611f5411b5a6 | p@chr17:42336860..42336865, - |
| 2.31e-117 | FFCP PHASE2:Hg19::chr12:829787..829796,-#_de789d58213172b8ef78611f5411b5a6 | p@chr12:829787..829796, - |
| 2.31e-117 | FFCP PHASE2:Hg19::chr16:29810067..29810071,+#_de789d58213172b8ef78611f5411b5a6 | p@chr16:29810067..29810071, + |
| 2.31e-117 | FFCP PHASE1:Hg19::chr2:127434629..127434640,+#_de789d58213172b8ef78611f5411b5a6 | p@chr2:127434629..127434640, + |
| 2.31e-117 | FFCP PHASE1:Hg19::chr17:42336860..42336865,-#_de789d58213172b8ef78611f5411b5a6 | p@chr17:42336860..42336865, - |
| 2.31e-117 | FFCP PHASE2:Hg19::chr14:81627978..81627994,-#_de789d58213172b8ef78611f5411b5a6 | p@chr14:81627978..81627994, - |
| 8.26e-109 | FFCP PHASE2:Hg19::chr6:148938884..148938891,+#_91f12306c23fd55c4c1c10cbb4c80127 | p@chr6:148938884..148938891, + |
| 8.26e-109 | FFCP PHASE1:Hg19::chr6:148938884..148938891,+#_91f12306c23fd55c4c1c10cbb4c80127 | p@chr6:148938884..148938891, + |
| 8.26e-109 | FFCP PHASE1:Hg19::chr2:192701558..192701565,-#_91f12306c23fd55c4c1c10cbb4c80127 | p@chr2:192701558..192701565, - |
| 8.26e-109 | FFCP PHASE2:Hg19::chr2:192701558..192701565,-#_91f12306c23fd55c4c1c10cbb4c80127 | p@chr2:192701558..192701565, - |
| 8.23e-106 | FFCP PHASE2:Hg19::chr5:95843224..95843228,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr5:95843224..95843228, - |
| 8.23e-106 | FFCP PHASE1:Hg19::chr7:30950369..30950387,+#_6a71872975dec3f6aa836d8f78b03e85 | p@chr7:30950369..30950387, + |
| 8.23e-106 | FFCP PHASE1:Hg19::chr6:156352553..156352562,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr6:156352553..156352562, - |
| 8.23e-106 | FFCP PHASE2:Hg19::chr12:30576643..30576644,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr12:30576643..30576644, - |
| 8.23e-106 | FFCP PHASE1:Hg19::chr5:95843224..95843228,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr5:95843224..95843228, - |
| 8.23e-106 | FFCP PHASE2:Hg19::chr6:156352553..156352562,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr6:156352553..156352562, - |
| 8.23e-106 | FFCP PHASE2:Hg19::chr11:76367785..76367794,-#_6a71872975dec3f6aa836d8f78b03e85 | p5@ENST00000531511 |
| 8.23e-106 | FFCP PHASE1:Hg19::chr11:76367785..76367794,-#_6a71872975dec3f6aa836d8f78b03e85 | p5@ENST00000531511 |
| 8.23e-106 | FFCP PHASE1:Hg19::chr3:142671745..142671768,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr3:142671745..142671768, - |
| 8.23e-106 | FFCP PHASE1:Hg19::chr17:42335778..42335781,-#_6a71872975dec3f6aa836d8f78b03e85 | p4@SLC4A1 |
| 8.23e-106 | FFCP PHASE2:Hg19::chr1:154912672..154912683,+#_6a71872975dec3f6aa836d8f78b03e85 | p@chr1:154912672..154912683, + |
| 8.23e-106 | FFCP PHASE2:Hg19::chr11:76367970..76367987,-#_6a71872975dec3f6aa836d8f78b03e85 | p2@ENST00000531511 |
| 8.23e-106 | FFCP PHASE2:Hg19::chr11:5246742..5246755,+#_6a71872975dec3f6aa836d8f78b03e85 | p7@CU675538 |
| 8.23e-106 | FFCP PHASE1:Hg19::chr10:46076393..46076404,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr10:46076393..46076404, - |
| 8.23e-106 | FFCP PHASE1:Hg19::chr10:8724326..8724327,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr10:8724326..8724327, - |
| 8.23e-106 | FFCP PHASE1:Hg19::chr2:23680232..23680238,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr2:23680232..23680238, - |
| 8.23e-106 | FFCP PHASE2:Hg19::chr2:127434578..127434589,+#_6a71872975dec3f6aa836d8f78b03e85 | p@chr2:127434578..127434589, + |
| 8.23e-106 | FFCP PHASE1:Hg19::chr1:154912672..154912683,+#_6a71872975dec3f6aa836d8f78b03e85 | p@chr1:154912672..154912683, + |
| 8.23e-106 | FFCP PHASE2:Hg19::chr8:21861540..21861544,+#_6a71872975dec3f6aa836d8f78b03e85 | p@chr8:21861540..21861544, + |
| 8.23e-106 | FFCP PHASE2:Hg19::chr10:8724326..8724327,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr10:8724326..8724327, - |
| 8.23e-106 | FFCP PHASE1:Hg19::chr11:5246715..5246726,+#_6a71872975dec3f6aa836d8f78b03e85 | p8@CU675538 |
| 8.23e-106 | FFCP PHASE2:Hg19::chr3:142671745..142671768,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr3:142671745..142671768, - |
| 8.23e-106 | FFCP PHASE1:Hg19::chr11:76367970..76367987,-#_6a71872975dec3f6aa836d8f78b03e85 | p2@ENST00000531511 |
| 8.23e-106 | FFCP PHASE2:Hg19::chr12:938316..938322,+#_6a71872975dec3f6aa836d8f78b03e85 | p@chr12:938316..938322, + |
| 8.23e-106 | FFCP PHASE2:Hg19::chr10:46076393..46076404,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr10:46076393..46076404, - |
| 8.23e-106 | FFCP PHASE2:Hg19::chr1:161137023..161137027,+#_6a71872975dec3f6aa836d8f78b03e85 | p@chr1:161137023..161137027, + |
| 8.23e-106 | FFCP PHASE2:Hg19::chr11:5246715..5246726,+#_6a71872975dec3f6aa836d8f78b03e85 | p8@CU675538 |
| 8.23e-106 | FFCP PHASE2:Hg19::chr17:42337173..42337177,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr17:42337173..42337177, - |
| 8.23e-106 | FFCP PHASE1:Hg19::chr11:5246742..5246755,+#_6a71872975dec3f6aa836d8f78b03e85 | p7@CU675538 |
| 8.23e-106 | FFCP PHASE1:Hg19::chr8:21861540..21861544,+#_6a71872975dec3f6aa836d8f78b03e85 | p@chr8:21861540..21861544, + |
| 8.23e-106 | FFCP PHASE1:Hg19::chr2:127434578..127434589,+#_6a71872975dec3f6aa836d8f78b03e85 | p@chr2:127434578..127434589, + |
| 8.23e-106 | FFCP PHASE1:Hg19::chr1:161137023..161137027,+#_6a71872975dec3f6aa836d8f78b03e85 | p@chr1:161137023..161137027, + |
| 8.23e-106 | FFCP PHASE1:Hg19::chr12:30576643..30576644,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr12:30576643..30576644, - |
| 8.23e-106 | FFCP PHASE2:Hg19::chr17:42335778..42335781,-#_6a71872975dec3f6aa836d8f78b03e85 | p4@SLC4A1 |
| 8.23e-106 | FFCP PHASE2:Hg19::chr2:23680232..23680238,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr2:23680232..23680238, - |
| 8.23e-106 | FFCP PHASE1:Hg19::chr12:938316..938322,+#_6a71872975dec3f6aa836d8f78b03e85 | p@chr12:938316..938322, + |
| 8.23e-106 | FFCP PHASE1:Hg19::chr17:42337173..42337177,-#_6a71872975dec3f6aa836d8f78b03e85 | p@chr17:42337173..42337177, - |
| 8.23e-106 | FFCP PHASE2:Hg19::chr7:30950369..30950387,+#_6a71872975dec3f6aa836d8f78b03e85 | p@chr7:30950369..30950387, + |
| 9.3e-106 | FFCP PHASE2:Hg19::chr7:18520409..18520411,-#_64de04139a7f279fef3692b8f1ae6db7 | p@chr7:18520409..18520411, - |
| 9.3e-106 | FFCP PHASE2:Hg19::chr3:39430391..39430424,+#_64de04139a7f279fef3692b8f1ae6db7 | p@chr3:39430391..39430424, + |
| 9.3e-106 | FFCP PHASE2:Hg19::chr11:235547..235556,-#_64de04139a7f279fef3692b8f1ae6db7 | p@chr11:235547..235556, - |
| 9.3e-106 | FFCP PHASE1:Hg19::chr3:24179318..24179327,+#_64de04139a7f279fef3692b8f1ae6db7 | p@chr3:24179318..24179327, + |
| 9.3e-106 | FFCP PHASE2:Hg19::chr3:24179318..24179327,+#_64de04139a7f279fef3692b8f1ae6db7 | p@chr3:24179318..24179327, + |
| 9.3e-106 | FFCP PHASE2:Hg19::chr19:17146840..17146843,-#_64de04139a7f279fef3692b8f1ae6db7 | p@chr19:17146840..17146843, - |
| 9.3e-106 | FFCP PHASE1:Hg19::chr11:235547..235556,-#_64de04139a7f279fef3692b8f1ae6db7 | p@chr11:235547..235556, - |
| 9.3e-106 | FFCP PHASE1:Hg19::chr7:18520409..18520411,-#_64de04139a7f279fef3692b8f1ae6db7 | p@chr7:18520409..18520411, - |
| 9.3e-106 | FFCP PHASE1:Hg19::chr3:39430391..39430424,+#_64de04139a7f279fef3692b8f1ae6db7 | p@chr3:39430391..39430424, + |
| 9.3e-106 | FFCP PHASE1:Hg19::chr19:17146840..17146843,-#_64de04139a7f279fef3692b8f1ae6db7 | p@chr19:17146840..17146843, - |
| 1.05e-105 | FFCP PHASE1:Hg19::chr3:151067996..151068011,-#_5a2ac6136b2ebe1e6020a027dbcc8fff | p@chr3:151067996..151068011, - |
| 1.05e-105 | FFCP PHASE1:Hg19::chr13:59545633..59545635,-#_5a2ac6136b2ebe1e6020a027dbcc8fff | p@chr13:59545633..59545635, - |
| 1.05e-105 | FFCP PHASE2:Hg19::chr3:151067996..151068011,-#_5a2ac6136b2ebe1e6020a027dbcc8fff | p@chr3:151067996..151068011, - |
| 1.05e-105 | FFCP PHASE2:Hg19::chr13:59545633..59545635,-#_5a2ac6136b2ebe1e6020a027dbcc8fff | p@chr13:59545633..59545635, - |
| 1.34e-105 | FFCP PHASE2:Hg19::chr4:99783676..99783681,-#_d31cdd831744daa5a2c78a2103555335 | p@chr4:99783676..99783681, - |
| 1.34e-105 | FFCP PHASE1:Hg19::chr4:99783676..99783681,-#_d31cdd831744daa5a2c78a2103555335 | p@chr4:99783676..99783681, - |
| 1.87e-104 | FFCP PHASE1:Hg19::chr4:52905409..52905410,-#_6d33d82d03761cae0b2e5b081d04f7b0 | p@chr4:52905409..52905410, - |
| 1.87e-104 | FFCP PHASE1:Hg19::chr8:21927844..21927847,+#_6d33d82d03761cae0b2e5b081d04f7b0 | p@chr8:21927844..21927847, + |
| 1.87e-104 | FFCP PHASE2:Hg19::chr1:206320318..206320322,+#_6d33d82d03761cae0b2e5b081d04f7b0 | p8@CTSE |
| 1.87e-104 | FFCP PHASE2:Hg19::chr4:171855577..171855579,-#_6d33d82d03761cae0b2e5b081d04f7b0 | p@chr4:171855577..171855579, - |
| 1.87e-104 | FFCP PHASE1:Hg19::chr1:206320318..206320322,+#_6d33d82d03761cae0b2e5b081d04f7b0 | p8@CTSE |
| 1.87e-104 | FFCP PHASE1:Hg19::chr1:17803417..17803419,-#_6d33d82d03761cae0b2e5b081d04f7b0 | p@chr1:17803417..17803419, - |
Property "Property value" (as page type) with input value "UBPROP:0000001 "A complex mixture of cells suspended in a liquid matrix that delivers nutrients to cells and removes wastes. (Source: BioGlossary, www.Biology-Text.com)[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Highly specialized circulating tissue consisting of several types of cells suspended in a fluid medium known as plasma.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000002 "relationship loss: subclass specialized connective tissue (AAO:0000571)[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
