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UBERON:0000383: Difference between revisions

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Line 14: Line 14:
|located_in=
|located_in=
|name=musculature of body
|name=musculature of body
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0002204
|part_of=UBERON:0002204

Latest revision as of 17:09, 12 September 2014

Name:musculature of body
Namespace:FANTOM
Definition:"Anatomical system that consists of all the muscles of the body[VSAO, modified]." [VSAO:0000033]
Xrefs:
links:

AAO:0000307
BILA:0000088
BTO:0001369
BTO:0001485
EFO:0000801
FBbt:00005069
FMA:72954
MA:0002888
MAT:0000025
MIAA:0000025
VSAO:0000033

XAO:0004042
Synonyms: "muscle system" EXACT []
"muscle system of body" EXACT []
"muscular system" EXACT [FMA:72954]
"musculature system" EXACT [BILA:0000088]
"muskelsystem" RELATED [BTO:0001485]
"set of all muscles" EXACT [FMA:72954]
"Set of muscles of body" EXACT [FMA:72954]
"vertebrate muscular system" EXACT [BTO:0001369]
Comments:AO notes: we place the MA term musculature here, rather than under uberon:musculature, as this seems more appropriate given the structure of MA
Alt_id: UBERON:BTO_0001485-FMA_72954

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000467(anatomical system)
part_of:UBERON:0002204(musculoskeletal system)



Children

part of:UBERON:0001015 (musculature),UBERON:0018254 (skeletal musculature)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000383 (musculature of body), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical system that consists of the muscles of the body.[VSAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.