UBERON:0000474: Difference between revisions
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|located_in= | |located_in= | ||
|name=female reproductive system | |name=female reproductive system | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0003100 | |part_of=UBERON:0003100 | ||
Latest revision as of 17:09, 12 September 2014
| Name: | female reproductive system | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "The organs of the female reproductive system." [Wikipedia:Female_genitalia] | |
| Xrefs: |
| |
| Synonyms: |
"female genital system" RELATED [] "female genitalia" RELATED [] "female organism genitalia" EXACT [OBOL:automatic] "female organism reproductive system" EXACT [OBOL:automatic] "female reproductive tract" RELATED [MA:0000381] "genitalia of female organism" EXACT [OBOL:automatic] "gynaecological tissue" RELATED [BTO:0000083] "reproductive system of female organism" EXACT [OBOL:automatic] "systema genitale femininum" RELATED [BTO:0000083] | |
| Alt_id: | UBERON:CARO_0000028-FBbt_00004864-FBbt_00007011-FMA_45663-MA_0000381-MIAA_0000028-XAO_0000156-XAO_0003005-ZFA_0000303 | |
| Subset: | uberon_slim |
200px-Scheme_female_reproductive_system-en.svg.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000990(reproductive system),UBERON:0014404(female anatomical structure) |
|---|---|
| part_of: | UBERON:0003100(female organism) |
Children
| disjoint from: | UBERON:0000079 (male reproductive system) |
|---|---|
| part of: | UBERON:0000992 (female gonad),UBERON:0000993 (oviduct),UBERON:0001987 (placenta),UBERON:0003134 (female reproductive organ),UBERON:0003975 (internal female genitalia),UBERON:0005056 (external female genitalia),UBERON:0006834 (uterus or analog) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10013-101C4 (cervix, adult, pool1)
- 10020-101D2 (ovary, adult, pool1)
- 10021-101D3 (placenta, adult, pool1)
- 10091-102C1
- 10100-102D1 (uterus, adult, pool1)
- 10204-103F6 (vagina, adult)
- 10426-106D3 (epidermoid carcinoma cell line:A431)
- 10431-106D8 (epidermoid carcinoma cell line:Ca Ski)
- 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
... further results Mouse (Mus musculus)
- 10013-101C4 (cervix, adult, pool1)
- 10020-101D2 (ovary, adult, pool1)
- 10021-101D3 (placenta, adult, pool1)
- 10091-102C1
- 10100-102D1 (uterus, adult, pool1)
- 10204-103F6 (vagina, adult)
- 10426-106D3 (epidermoid carcinoma cell line:A431)
- 10431-106D8 (epidermoid carcinoma cell line:Ca Ski)
- 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000474 (female reproductive system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
