UBERON:0001444: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=subdivision of head | |name=subdivision of head | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000033 | |part_of=UBERON:0000033 | ||
Latest revision as of 17:18, 12 September 2014
| Name: | subdivision of head | |
|---|---|---|
| Namespace: | FANTOM | |
| Xrefs: |
| |
| Synonyms: |
"head region" EXACT [] "head subdivision" EXACT [] "region of head" EXACT [] | |
| Comments: | This class was created automatically from a combination of ontologies | |
| Alt_id: | UBERON:FMA_24218-XAO_0000040 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000475(organism subdivision) |
|---|---|
| part_of: | UBERON:0000033(head) |
Children
| is a: | UBERON:0001456 (face),UBERON:0001567 (cheek),UBERON:0004089 (midface) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10030-101E3 (retina, adult, pool1)
- 10047-101G2 (tonsil, adult, pool1)
- 10059-101H5 (tongue, fetal, donor1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 10203-103F5 (tongue, adult)
- 10268-104D7 (eye - vitreous humor, donor1)
- 10269-104D8
- 10270-104D9
... further results Mouse (Mus musculus)
- 10030-101E3 (retina, adult, pool1)
- 10047-101G2 (tonsil, adult, pool1)
- 10059-101H5 (tongue, fetal, donor1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 10203-103F5 (tongue, adult)
- 10268-104D7 (eye - vitreous humor, donor1)
- 10269-104D8
- 10270-104D9
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001444 (subdivision of head), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
