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UBERON:0001915: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=endothelium of capillary
|name=endothelium of capillary
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0001982
|part_of=UBERON:0001982

Latest revision as of 17:23, 12 September 2014

Name:endothelium of capillary
Namespace:FANTOM
Definition:"An endothelium that is part of a capillary [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0004954
FMA:62114
MA:0000711

ncithesaurus:Capillary_Endothelium
Synonyms: "blood capillary endothelium" EXACT [OBOL:automatic]
"capillary endothelium" EXACT []
"capillary vessel endothelium" EXACT [OBOL:automatic]
"endothelium of blood capillary" EXACT [OBOL:automatic]
"endothelium of capillary vessel" EXACT [OBOL:automatic]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_62114-MA_0000711

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004638(blood vessel endothelium)
part_of:UBERON:0001982(capillary)



Children

part of:CL:0002144 (capillary endothelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

  • 11265-116G5 (Endothelial Cells - Microvascular, donor1)
  • 11342-117G1 (Endothelial Cells - Microvascular, donor2)
  • 11414-118F1 (Endothelial Cells - Microvascular, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001915 (endothelium of capillary), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data