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UBERON:0002073: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=hair follicle
|name=hair follicle
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0001003;;UBERON:0011932
|part_of=UBERON:0001003;;UBERON:0011932

Latest revision as of 17:25, 12 September 2014

Name:hair follicle
Namespace:FANTOM
Definition:"a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open[GO]." [Wikipedia:Hair_follicle]
Xrefs:
links:

BTO:0000554
EFO:0002464
EMAPA:29741
EV:0100156
FMA:70660
GAID:934
[1]
MA:0000154
MESH:A.10.272.497.500
ncithesaurus:Hair_Follicle
OpenCyc:Mx4rvVjOI5wpEbGdrcN5Y29ycA
SCTID:280830006

VHOG:0001268
Synonyms: "folliculus pili" RELATED LATIN [Wikipedia:Hair_follicle]
"vibrissa follicle" RELATED [MP:0010234]
Comments:TODO - add new class for MA:0002910 vibrissa follicle
Alt_id: UBERON:FMA_70660-MA_0000154
Subset: organ_slim
uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000064(organ part),UBERON:0004121(ectoderm-derived structure),UBERON:0010314(structure with developmental contribution from neural crest)
develops_from:UBERON:0005086(hair follicle placode)
part_of:UBERON:0001003(skin epidermis),UBERON:0011932(pilosebaceous unit)



Children

is a:FF:0011174 (Skin - armpit hair follicle)
part of:CL:0002559 (hair follicle cell),UBERON:0005932 (bulb of hair follicle)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002073 (hair follicle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data