UBERON:0002084: Difference between revisions
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|located_in= | |located_in= | ||
|name=heart left ventricle | |name=heart left ventricle | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= |
Latest revision as of 17:25, 12 September 2014
Name: | heart left ventricle | |
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Namespace: | FANTOM | |
Definition: | "Left cardiac chamber which is continuous with the aorta.[FMA]" [FMA:FMA, Wikipedia:Left_ventricle] | |
Xrefs: |
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Synonyms: |
"cardiac left ventricle" EXACT [] "left cardiac ventricle" EXACT [] "left ventricle" EXACT [FMA:7101] "left ventricle of heart" EXACT [] "ventriculus sinister cordis" RELATED LATIN [Wikipedia:Left_ventricle] | |
Alt_id: | UBERON:FMA_7101-MA_0000092 | |
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002082(cardiac ventricle),UBERON:0015212(lateral structure) |
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develops_from: | UBERON:0004140(primary heart field) |
Children
derives from: | FF:0010078 (human left ventricle - adult sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10078-102A6 (left ventricle, adult, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002084 (heart left ventricle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data