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UBERON:0002084: Difference between revisions

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|located_in=
|located_in=
|name=heart left ventricle
|name=heart left ventricle
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=
|part_of=

Latest revision as of 17:25, 12 September 2014

Name:heart left ventricle
Namespace:FANTOM
Definition:"Left cardiac chamber which is continuous with the aorta.[FMA]" [FMA:FMA, Wikipedia:Left_ventricle]
Xrefs:
links:

BTO:0001629
EHDAA2:0002178
EMAPA:17337
FMA:7101
galen:LeftVentricle
[1]
[ 200px-Diagram_of_the_human_heart_%28cropped%29.svg.png 200px-Diagram_of_the_human_heart_%28cropped%29.svg.png]
MA:0000092
ncithesaurus:Left_Ventricle
OpenCyc:Mx4rtW8v46gEEdudWQACs5b6Bw
OpenCyc:Mx8Ngh4rvgIFoJwpEbGdrcN5Y29ycB4rvVjj1pwpEbGdrcN5Y29ycA
SCTID:244385005

VHOG:0000718
Synonyms: "cardiac left ventricle" EXACT []
"left cardiac ventricle" EXACT []
"left ventricle" EXACT [FMA:7101]
"left ventricle of heart" EXACT []
"ventriculus sinister cordis" RELATED LATIN [Wikipedia:Left_ventricle]
Alt_id: UBERON:FMA_7101-MA_0000092
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002082(cardiac ventricle),UBERON:0015212(lateral structure)
develops_from:UBERON:0004140(primary heart field)



Children

derives from:FF:0010078 (human left ventricle - adult sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002084 (heart left ventricle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data