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UBERON:0002506: Difference between revisions

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|located_in=
|located_in=
|name=iris epithelium
|name=iris epithelium
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0001769
|part_of=UBERON:0001769

Latest revision as of 17:33, 12 September 2014

Name:iris epithelium
Namespace:FANTOM
Definition:"An epithelium that is part of a iris [Obol]." [OBOL:automatic]
Xrefs:
links:

FMA:58517

MA:0002826
Synonyms: "epithelial tissue of iris" EXACT [OBOL:automatic]
"epithelium of iris" EXACT [OBOL:automatic]
"epithelium pigmentosum (iris)" EXACT [FMA:58517]
"epithelium pigmentosum iridis" EXACT [FMA:58517, FMA:TA]
"iris epithelial tissue" EXACT [OBOL:automatic]
"iris epithelium" EXACT [FMA:58517]
"iris pigmented epithelium" RELATED [MA:0002826]
"pigmented epithelium of iris" EXACT [FMA:58517]
Alt_id: UBERON:MA_0002826-FMA_58517

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000488(atypical epithelium),UBERON:0010313(neural crest-derived structure),UBERON:0015808(eye epithelium)
part_of:UBERON:0001769(iris)



Children

part of:CL:0002565 (iris pigment epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002506 (iris epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data