UBERON:0003101: Difference between revisions
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|located_in= | |located_in= | ||
|name=male organism | |name=male organism | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 17:37, 12 September 2014
| Name: | male organism | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Gonochoristic organism that can produce male gametes." [CARO:0000027] | ||
| Xrefs: |
| ||
| Synonyms: |
"male" RELATED [TAO:0000242] "male human body" NARROW SENSU [FMA:67811] | ||
| Alt_id: | UBERON:XAO_0003006-ZFA_0000242 | ||
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000468(multi-cellular organism) |
|---|
Children
| disjoint from: | UBERON:0003100 (female organism) |
|---|---|
| part of: | UBERON:0000079 (male reproductive system),UBERON:0003135 (male reproductive organ),UBERON:0014403 (male anatomical structure) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10022-101D4 (prostate, adult, pool1)
- 10026-101D8 (testis, adult, pool1)
- 10092-102C2
- 10096-102C6 (testis, adult, pool2)
- 10196-103E7 (ductus deferens, adult)
- 10197-103E8 (epididymis, adult)
- 10200-103F2 (penis, adult)
- 10201-103F3 (seminal vesicle, adult)
- 10439-106E7 (prostate cancer cell line:PC-3)
- 10490-107B4 (prostate cancer cell line:DU145)
... further results Mouse (Mus musculus)
- 10022-101D4 (prostate, adult, pool1)
- 10026-101D8 (testis, adult, pool1)
- 10092-102C2
- 10096-102C6 (testis, adult, pool2)
- 10196-103E7 (ductus deferens, adult)
- 10197-103E8 (epididymis, adult)
- 10200-103F2 (penis, adult)
- 10201-103F3 (seminal vesicle, adult)
- 10439-106E7 (prostate cancer cell line:PC-3)
- 10490-107B4 (prostate cancer cell line:DU145)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003101 (male organism), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.88e-59 | FFCP PHASE1:Mm9::chr11:69431224..69431241,-#_c7da56431cfec824b79be09543844ac2 | p@chr11:69431224..69431241, - |
| 1.88e-59 | FFCP PHASE1:Mm9::chr16:37843615..37843636,-#_c7da56431cfec824b79be09543844ac2 | p@chr16:37843615..37843636, - |
| 1.88e-59 | FFCP PHASE1:Mm9::chrX:93160409..93160432,-#_c7da56431cfec824b79be09543844ac2 | p@chrX:93160409..93160432, - |
| 1.88e-59 | FFCP PHASE2:Mm9::chr11:69431224..69431241,-#_c7da56431cfec824b79be09543844ac2 | p@chr11:69431224..69431241, - |
| 1.88e-59 | FFCP PHASE2:Mm9::chr8:26314366..26314395,-#_c7da56431cfec824b79be09543844ac2 | p@chr8:26314366..26314395, - |
| 1.88e-59 | FFCP PHASE2:Mm9::chr16:37843615..37843636,-#_c7da56431cfec824b79be09543844ac2 | p@chr16:37843615..37843636, - |
| 1.88e-59 | FFCP PHASE1:Mm9::chr8:26314366..26314395,-#_c7da56431cfec824b79be09543844ac2 | p@chr8:26314366..26314395, - |
| 1.88e-59 | FFCP PHASE2:Mm9::chrX:93160409..93160432,-#_c7da56431cfec824b79be09543844ac2 | p@chrX:93160409..93160432, - |
| 6.54e-57 | FFCP PHASE1:Mm9::chr2:152430094..152430135,+#_a8c24d1f6c710c1fb9e61b1b56d8764d | p1@Defb36 |
| 6.54e-57 | FFCP PHASE2:Mm9::chr2:152430094..152430135,+#_a8c24d1f6c710c1fb9e61b1b56d8764d | p1@Defb36 |
| 1.11e-54 | FFCP PHASE2:Mm9::chr2:148660852..148660861,+#_c003dcb1e58be333becec34cf0cb5ead | p3@Cst9 |
| 1.11e-54 | FFCP PHASE1:Mm9::chr8:26314291..26314315,-#_c003dcb1e58be333becec34cf0cb5ead | p@chr8:26314291..26314315, - |
| 1.11e-54 | FFCP PHASE1:Mm9::chr19:25580226..25580261,+#_c003dcb1e58be333becec34cf0cb5ead | p2@Dmrt1 |
| 1.11e-54 | FFCP PHASE2:Mm9::chr8:26314291..26314315,-#_c003dcb1e58be333becec34cf0cb5ead | p@chr8:26314291..26314315, - |
| 1.11e-54 | FFCP PHASE1:Mm9::chr2:148660852..148660861,+#_c003dcb1e58be333becec34cf0cb5ead | p3@Cst9 |
| 1.11e-54 | FFCP PHASE2:Mm9::chr19:25580226..25580261,+#_c003dcb1e58be333becec34cf0cb5ead | p2@Dmrt1 |
| 4.22e-54 | FFCP PHASE2:Mm9::chr11:69431571..69431587,-#_bd1d7212003d4c07eff0aa4726675885 | p3@Shbg |
| 4.22e-54 | FFCP PHASE2:Mm9::chr11:69431091..69431096,-#_bd1d7212003d4c07eff0aa4726675885 | p@chr11:69431091..69431096, - |
| 4.22e-54 | FFCP PHASE2:Mm9::chr19:25580353..25580364,+#_bd1d7212003d4c07eff0aa4726675885 | p4@Dmrt1 |
| 4.22e-54 | FFCP PHASE1:Mm9::chr19:25580353..25580364,+#_bd1d7212003d4c07eff0aa4726675885 | p4@Dmrt1 |
| 4.22e-54 | FFCP PHASE1:Mm9::chr2:31332380..31332388,+#_bd1d7212003d4c07eff0aa4726675885 | p@chr2:31332380..31332388, + |
| 4.22e-54 | FFCP PHASE1:Mm9::chr11:69431571..69431587,-#_bd1d7212003d4c07eff0aa4726675885 | p3@Shbg |
| 4.22e-54 | FFCP PHASE1:Mm9::chr11:69431091..69431096,-#_bd1d7212003d4c07eff0aa4726675885 | p@chr11:69431091..69431096, - |
| 4.22e-54 | FFCP PHASE2:Mm9::chr2:31332380..31332388,+#_bd1d7212003d4c07eff0aa4726675885 | p@chr2:31332380..31332388, + |
| 4.22e-54 | FFCP PHASE2:Mm9::chr10:127031444..127031494,-#_bd1d7212003d4c07eff0aa4726675885 | p@chr10:127031444..127031494, - |
| 4.22e-54 | FFCP PHASE1:Mm9::chr6:83138985..83138996,+#_bd1d7212003d4c07eff0aa4726675885 | p10@Dctn1 |
| 4.22e-54 | FFCP PHASE2:Mm9::chr6:83138985..83138996,+#_bd1d7212003d4c07eff0aa4726675885 | p10@Dctn1 |
| 4.22e-54 | FFCP PHASE1:Mm9::chr10:127031444..127031494,-#_bd1d7212003d4c07eff0aa4726675885 | p@chr10:127031444..127031494, - |
| 6.24e-54 | FFCP PHASE2:Hg19::chr1:44584485..44584512,+#_7caa48e6b073fa7594bc17ce42341976 | p2@KLF17 |
| 6.24e-54 | FFCP PHASE1:Hg19::chr1:44584485..44584512,+#_7caa48e6b073fa7594bc17ce42341976 | p2@KLF17 |
| 2.5e-53 | FFCP PHASE2:Mm9::chr6:145564529..145564546,+#_367a377a8704d9c54da00c1a114bab11 | p1@Tuba3b |
| 2.5e-53 | FFCP PHASE1:Mm9::chr6:145564529..145564546,+#_367a377a8704d9c54da00c1a114bab11 | p1@Tuba3b |
| 2.76e-53 | FFCP PHASE1:Mm9::chr6:125236033..125236068,-#_0a37eca58e30889448978e8dea35b702 | p1@Tuba3a, p2@Tuba3b |
| 2.76e-53 | FFCP PHASE2:Mm9::chr6:125236033..125236068,-#_0a37eca58e30889448978e8dea35b702 | p1@Tuba3a, p2@Tuba3b |
| 1.21e-50 | FFCP PHASE2:Mm9::chr7:20074432..20074443,+#_477eaa80adf1ff991b986df5850ac2f7 | p2@Exoc3l2 |
| 1.21e-50 | FFCP PHASE1:Mm9::chr13:64190487..64190500,-#_477eaa80adf1ff991b986df5850ac2f7 | p3@Hsd17b3 |
| 1.21e-50 | FFCP PHASE2:Mm9::chr6:83139055..83139074,+#_477eaa80adf1ff991b986df5850ac2f7 | p7@Dctn1 |
| 1.21e-50 | FFCP PHASE2:Mm9::chr13:64190487..64190500,-#_477eaa80adf1ff991b986df5850ac2f7 | p3@Hsd17b3 |
| 1.21e-50 | FFCP PHASE1:Mm9::chr7:20074432..20074443,+#_477eaa80adf1ff991b986df5850ac2f7 | p2@Exoc3l2 |
| 1.21e-50 | FFCP PHASE1:Mm9::chr6:83139055..83139074,+#_477eaa80adf1ff991b986df5850ac2f7 | p7@Dctn1 |
| 1.35e-50 | FFCP PHASE2:Mm9::chr19:25580272..25580305,+#_d201b272fc8da128d7103ed51cf61cce | p3@Dmrt1 |
| 1.35e-50 | FFCP PHASE2:Mm9::chrX:50788129..50788149,+#_d201b272fc8da128d7103ed51cf61cce | p2@Etd |
| 1.35e-50 | FFCP PHASE2:Mm9::chr14:27258741..27258755,-#_d201b272fc8da128d7103ed51cf61cce | p12@Slmap |
| 1.35e-50 | FFCP PHASE1:Mm9::chr14:27258741..27258755,-#_d201b272fc8da128d7103ed51cf61cce | p12@Slmap |
| 1.35e-50 | FFCP PHASE1:Mm9::chrX:50788129..50788149,+#_d201b272fc8da128d7103ed51cf61cce | p2@Etd |
| 1.35e-50 | FFCP PHASE1:Mm9::chr19:25580272..25580305,+#_d201b272fc8da128d7103ed51cf61cce | p3@Dmrt1 |
| 1.68e-50 | FFCP PHASE1:Mm9::chr8:26314330..26314348,-#_1e5b98d7f7f7fb2755a36810fde0d567 | p@chr8:26314330..26314348, - |
| 1.68e-50 | FFCP PHASE2:Mm9::chr8:26314330..26314348,-#_1e5b98d7f7f7fb2755a36810fde0d567 | p@chr8:26314330..26314348, - |
| 1.87e-50 | FFCP PHASE1:Mm9::chr12:77084655..77084667,+#_a71b4a23c446f98f4b837e0f837b5845 | p@chr12:77084655..77084667, + |
| 1.87e-50 | FFCP PHASE2:Mm9::chr12:77084655..77084667,+#_a71b4a23c446f98f4b837e0f837b5845 | p@chr12:77084655..77084667, + |
| 2.09e-50 | FFCP PHASE1:Mm9::chrX:50788166..50788192,+#_f0f900d69f0f0ff06e70171e03f99cfe | p1@Etd |
| 2.09e-50 | FFCP PHASE2:Mm9::chrX:50788166..50788192,+#_f0f900d69f0f0ff06e70171e03f99cfe | p1@Etd |
| 3.4e-50 | FFCP PHASE1:Mm9::chr1:168168856..168168893,-#_0a6038b1604d6b0fa37c17dd6a0241f5 | p1@Mael |
| 3.4e-50 | FFCP PHASE2:Mm9::chr1:168168856..168168893,-#_0a6038b1604d6b0fa37c17dd6a0241f5 | p1@Mael |
| 2.72e-49 | FFCP PHASE2:Mm9::chr15:81602763..81602776,+#_c567b079d4db3fe63fee0e8c4533be21 | p@chr15:81602763..81602776, + |
| 2.72e-49 | FFCP PHASE1:Mm9::chr15:81602763..81602776,+#_c567b079d4db3fe63fee0e8c4533be21 | p@chr15:81602763..81602776, + |
| 3.05e-49 | FFCP PHASE2:Mm9::chr2:152430060..152430086,+#_5d191cab871f9ab3f557286fe1d059b5 | p3@Defb36 |
| 3.05e-49 | FFCP PHASE1:Mm9::chr2:152430060..152430086,+#_5d191cab871f9ab3f557286fe1d059b5 | p3@Defb36 |
| 3.05e-49 | FFCP PHASE1:Mm9::chr1:13216038..13216051,-#_5d191cab871f9ab3f557286fe1d059b5 | p@chr1:13216038..13216051, - |
| 3.05e-49 | FFCP PHASE2:Mm9::chr1:13216038..13216051,-#_5d191cab871f9ab3f557286fe1d059b5 | p@chr1:13216038..13216051, - |
| 4.33e-49 | FFCP PHASE2:Mm9::chr11:100940503..100940515,+#_b14f511cfb5897559c27b2b61f21b910 | p@chr11:100940503..100940515, + |
| 4.33e-49 | FFCP PHASE2:Mm9::chrX:49154255..49154260,-#_b14f511cfb5897559c27b2b61f21b910 | p1@Usp26 |
| 4.33e-49 | FFCP PHASE1:Mm9::chrX:49154255..49154260,-#_b14f511cfb5897559c27b2b61f21b910 | p1@Usp26 |
| 4.33e-49 | FFCP PHASE1:Mm9::chr11:100940503..100940515,+#_b14f511cfb5897559c27b2b61f21b910 | p@chr11:100940503..100940515, + |
| 5.47e-49 | FFCP PHASE2:Mm9::chr18:12758403..12758434,+#_fc62bb86f0332b3f555cce42739c5502 | p5@Ttc39c |
| 5.47e-49 | FFCP PHASE1:Mm9::chr18:12758403..12758434,+#_fc62bb86f0332b3f555cce42739c5502 | p5@Ttc39c |
| 8.92e-49 | FFCP PHASE2:Mm9::chr4:140652853..140652865,+#_996775b476965a41194c644855cd1b10 | p@chr4:140652853..140652865, + |
| 8.92e-49 | FFCP PHASE1:Mm9::chr1:135261724..135261733,+#_996775b476965a41194c644855cd1b10 | p11@Etnk2 |
| 8.92e-49 | FFCP PHASE1:Mm9::chr3:89763068..89763078,-#_996775b476965a41194c644855cd1b10 | p@chr3:89763068..89763078, - |
| 8.92e-49 | FFCP PHASE2:Mm9::chr1:121420313..121420329,+#_996775b476965a41194c644855cd1b10 | p@chr1:121420313..121420329, + |
| 8.92e-49 | FFCP PHASE1:Mm9::chrX:71422564..71422575,+#_996775b476965a41194c644855cd1b10 | p2@Tktl1 |
| 8.92e-49 | FFCP PHASE2:Mm9::chr7:6615049..6615056,-#_996775b476965a41194c644855cd1b10 | p1@Zim2 |
| 8.92e-49 | FFCP PHASE1:Mm9::chr7:6615049..6615056,-#_996775b476965a41194c644855cd1b10 | p1@Zim2 |
| 8.92e-49 | FFCP PHASE2:Mm9::chrX:71422564..71422575,+#_996775b476965a41194c644855cd1b10 | p2@Tktl1 |
| 8.92e-49 | FFCP PHASE2:Mm9::chr1:135261724..135261733,+#_996775b476965a41194c644855cd1b10 | p11@Etnk2 |
| 8.92e-49 | FFCP PHASE1:Mm9::chr4:140652853..140652865,+#_996775b476965a41194c644855cd1b10 | p@chr4:140652853..140652865, + |
| 8.92e-49 | FFCP PHASE1:Mm9::chr1:121420313..121420329,+#_996775b476965a41194c644855cd1b10 | p@chr1:121420313..121420329, + |
| 8.92e-49 | FFCP PHASE2:Mm9::chr3:89763068..89763078,-#_996775b476965a41194c644855cd1b10 | p@chr3:89763068..89763078, - |
| 9.66e-49 | FFCP PHASE2:Mm9::chr2:148615085..148615142,+#_9048eb2a787646f0435a4343f509e34d | p1@Cst12 |
| 9.66e-49 | FFCP PHASE1:Mm9::chr2:148615085..148615142,+#_9048eb2a787646f0435a4343f509e34d | p1@Cst12 |
| 3.5e-47 | FFCP PHASE2:Mm9::chr15:81602721..81602750,+#_4f01734a5c25b2e1542b6160fef60b25 | p@chr15:81602721..81602750, + |
| 3.5e-47 | FFCP PHASE2:Mm9::chr2:148607822..148607844,+#_4f01734a5c25b2e1542b6160fef60b25 | p2@8030411F24Rik |
| 3.5e-47 | FFCP PHASE2:Mm9::chr2:148660933..148660963,+#_4f01734a5c25b2e1542b6160fef60b25 | p2@Cst9 |
| 3.5e-47 | FFCP PHASE1:Mm9::chr19:25580110..25580163,+#_4f01734a5c25b2e1542b6160fef60b25 | p1@Dmrt1 |
| 3.5e-47 | FFCP PHASE2:Mm9::chr1:135261737..135261767,+#_4f01734a5c25b2e1542b6160fef60b25 | p6@Etnk2 |
| 3.5e-47 | FFCP PHASE1:Mm9::chr2:148660933..148660963,+#_4f01734a5c25b2e1542b6160fef60b25 | p2@Cst9 |
| 3.5e-47 | FFCP PHASE1:Mm9::chr15:81602721..81602750,+#_4f01734a5c25b2e1542b6160fef60b25 | p@chr15:81602721..81602750, + |
| 3.5e-47 | FFCP PHASE1:Mm9::chr1:135261737..135261767,+#_4f01734a5c25b2e1542b6160fef60b25 | p6@Etnk2 |
| 3.5e-47 | FFCP PHASE1:Mm9::chr2:148607822..148607844,+#_4f01734a5c25b2e1542b6160fef60b25 | p2@8030411F24Rik |
| 3.5e-47 | FFCP PHASE2:Mm9::chr19:25580110..25580163,+#_4f01734a5c25b2e1542b6160fef60b25 | p1@Dmrt1 |
| 3.88e-47 | FFCP PHASE2:Mm9::chr2:148607786..148607808,+#_af038feeb5e6fb7db26838dc333a612a | p1@8030411F24Rik |
| 3.88e-47 | FFCP PHASE1:Mm9::chr2:148607786..148607808,+#_af038feeb5e6fb7db26838dc333a612a | p1@8030411F24Rik |
| 4.29e-47 | FFCP PHASE1:Mm9::chr15:76701495..76701535,-#_0b623dbfd26dfa6a398f4cc8f4179b5e | p3@Zfp251 |
| 4.29e-47 | FFCP PHASE2:Mm9::chr15:76701495..76701535,-#_0b623dbfd26dfa6a398f4cc8f4179b5e | p3@Zfp251 |
| 5.26e-47 | FFCP PHASE2:Mm9::chr12:105339370..105339379,+#_c5bbc306621445d9f0a1e1bd709f510e | p2@Serpina5 |
| 5.26e-47 | FFCP PHASE1:Mm9::chr12:105339370..105339379,+#_c5bbc306621445d9f0a1e1bd709f510e | p2@Serpina5 |
| 6.44e-47 | FFCP PHASE2:Mm9::chr1:13216009..13216028,-#_b243048f9ceec6eff4148d81d0e56687 | p@chr1:13216009..13216028, - |
| 6.44e-47 | FFCP PHASE1:Mm9::chr1:13216009..13216028,-#_b243048f9ceec6eff4148d81d0e56687 | p@chr1:13216009..13216028, - |
| 7.89e-47 | FFCP PHASE2:Mm9::chr17:49649179..49649202,-#_ae3eee0b933d3b5de53dd11371a948bf | p@chr17:49649179..49649202, - |
| 7.89e-47 | FFCP PHASE1:Mm9::chr17:49649179..49649202,-#_ae3eee0b933d3b5de53dd11371a948bf | p@chr17:49649179..49649202, - |
