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UBERON:0003509: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=arterial blood vessel
|name=arterial blood vessel
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0004572
|part_of=UBERON:0004572

Latest revision as of 17:40, 12 September 2014

Name:arterial blood vessel
Namespace:FANTOM
Definition:"A blood vessel that is part of the arterial system. Includes artery, arteriole and aorta." [UBERON:cjm]
Xrefs:
links:
MA:0000061
Comments:only in MA - supertype of artery, arteriole, aorta.

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001981(blood vessel)
part_of:UBERON:0004572(arterial system)



Children

is a:UBERON:0000947 (aorta),UBERON:0001637 (artery),UBERON:0003643 (respiratory system arterial blood vessel)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003509 (arterial blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data