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UBERON:0004638: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=blood vessel endothelium
|name=blood vessel endothelium
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0001981
|part_of=UBERON:0001981

Latest revision as of 17:46, 12 September 2014

Name:blood vessel endothelium
Namespace:FANTOM
Definition:"An endothelium that lines the blood vasculature. Other endothelia may line lymph vessels, the heart" [UBERON:cjm]
Xrefs:
links:

BTO:0000766
MA:0000709
ncithesaurus:Blood_Vessel_Endothelium
TAO:0005257

ZFA:0005257
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004852(cardiovascular system endothelium)
part_of:UBERON:0001981(blood vessel)



Children

is a:UBERON:0001915 (endothelium of capillary),UBERON:0001917 (endothelium of artery),UBERON:2005260 (fenestrated capillary)
part of:CL:0000071 (blood vessel endothelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004638 (blood vessel endothelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data