UBERON:0004797: Difference between revisions
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|located_in= | |located_in= | ||
|name=blood vessel layer | |name=blood vessel layer | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001981 | |part_of=UBERON:0001981 | ||
Latest revision as of 17:48, 12 September 2014
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004120(mesoderm-derived structure),UBERON:0004923(organ component layer) |
|---|---|
| part_of: | UBERON:0001981(blood vessel) |
Children
| is a: | UBERON:0002523 (tunica intima),UBERON:0005734 (tunica adventitia of blood vessel) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11326-117E3 (Fibroblast - Aortic Adventitial, donor2)
- 11401-118D6 (Fibroblast - Aortic Adventitial, donor3)
- 14309-155C7
- 14310-155C8 (Fibroblast - Aortic Adventitial donor3 (cytoplasmic fraction))
- 14311-155C9 (Fibroblast - Aortic Adventitial, donor3 (nuclear fraction))
- 14330-155F1
- 14331-155F2 (Fibroblast - Aortic Adventitial donor2 (cytoplasmic fraction))
- 14332-155F3 (Fibroblast - Aortic Adventitial, donor2 (nuclear fraction))
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004797 (blood vessel layer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
