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UBERON:0005208: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=right atrium valve
|name=right atrium valve
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0002078
|part_of=UBERON:0002078

Latest revision as of 17:51, 12 September 2014

Name:right atrium valve
Namespace:FANTOM
Definition:"A valve that is part of a right atrium [Obol]." [OBOL:automatic]
Xrefs:
links:

EHDAA2:0000302
EMAPA:17327

MA:0001871
Synonyms: "right atrium valves" RELATED PLURAL [EHDAA2:0000302]
"valve of right atrium" EXACT [EMAPA:17327]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0003978(valve),UBERON:0004120(mesoderm-derived structure)
part_of:UBERON:0002078(right cardiac atrium)



Children

is a:UBERON:0002134 (tricuspid valve)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005208 (right atrium valve), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data