UBERON:0005933: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=hair root sheath | |name=hair root sheath | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0005932 | |part_of=UBERON:0005932 |
Latest revision as of 17:55, 12 September 2014
Name: | hair root sheath | |
---|---|---|
Namespace: | FANTOM | |
Xrefs: |
| |
Comments: | see https://sourceforge.net/tracker/?func |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000479(tissue),UBERON:0004121(ectoderm-derived structure),UBERON:0010314(structure with developmental contribution from neural crest) |
---|---|
part_of: | UBERON:0005932(bulb of hair follicle) |
Children
is a: | UBERON:0005941 (hair inner root sheath),UBERON:0005942 (hair outer root sheath) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11504-119G1 (Hair Follicle Outer Root Sheath Cells, donor1)
- 11505-119G2
- 11584-120F9 (Hair Follicle Outer Root Sheath Cells, donor2)
- 11585-120G1
- 11665-122F9
- 11666-122G1
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005933 (hair root sheath), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data