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UBERON:0005933: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=hair root sheath
|name=hair root sheath
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0005932
|part_of=UBERON:0005932

Latest revision as of 17:55, 12 September 2014

Name:hair root sheath
Namespace:FANTOM
Xrefs:
links:

EMAPA:18772
MA:0000162

MA:0000784
Comments:see https://sourceforge.net/tracker/?func

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000479(tissue),UBERON:0004121(ectoderm-derived structure),UBERON:0010314(structure with developmental contribution from neural crest)
part_of:UBERON:0005932(bulb of hair follicle)



Children

is a:UBERON:0005941 (hair inner root sheath),UBERON:0005942 (hair outer root sheath)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005933 (hair root sheath), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data