UBERON:0007497: Difference between revisions
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|located_in= | |located_in= | ||
|name=developing epithelial placode | |name=developing epithelial placode | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 18:01, 12 September 2014
| Name: | developing epithelial placode | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A domain of columnar epithelium in an embryo that represents the early stage of the development of the epithelial component of a new anatomical structure." [JB:DEF] | ||
| Xrefs: |
| ||
| Synonyms: | "epithelial placode" EXACT [AEO:0000112] | ||
| Alt_id: | EHDAA2:0003112 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000485(simple columnar epithelium),UBERON:0001048(primordium) |
|---|
Children
| is a: | UBERON:0001049 (neural tube),UBERON:0003050 (olfactory placode),UBERON:0003051 (ear vesicle),UBERON:0003071 (eye primordium),UBERON:0003075 (neural plate),UBERON:0003894 (liver primordium),UBERON:0004209 (renal vesicle),UBERON:0005081 (ureter ureteric bud),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007497 (developing epithelial placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr4:70707713..70707716, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr8:90366581..90366594, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr6:21648948..21648949, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr4:70707713..70707716, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr8:90366581..90366594, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr6:21648948..21648949, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_43170746cb22dd0005a9ffd1c223da97 | p3@Fanca |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_43170746cb22dd0005a9ffd1c223da97 | p3@Strc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr6:86746562..86746579, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_43170746cb22dd0005a9ffd1c223da97 | p5@Fer1l6 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_43170746cb22dd0005a9ffd1c223da97 | p7@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:194818647..194818660, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_43170746cb22dd0005a9ffd1c223da97 | p18@Trpm3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_43170746cb22dd0005a9ffd1c223da97 | p4@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_43170746cb22dd0005a9ffd1c223da97 | p2@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_43170746cb22dd0005a9ffd1c223da97 | p6@Jag1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_43170746cb22dd0005a9ffd1c223da97 | p1@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr11:114603036..114603048, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr16:93971325..93971337, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:172843813..172843834, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_43170746cb22dd0005a9ffd1c223da97 | p7@Glt25d2 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr4:130461150..130461185, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr5:72652660..72652667, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_43170746cb22dd0005a9ffd1c223da97 | p2@9230102O04Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr13:43699188..43699216, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_43170746cb22dd0005a9ffd1c223da97 | p9@Ankrd24 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_43170746cb22dd0005a9ffd1c223da97 | p1@Otog |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr5:3909310..3909321, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_43170746cb22dd0005a9ffd1c223da97 | p5@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr11:75421384..75421397, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_43170746cb22dd0005a9ffd1c223da97 | p1@Espnl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_43170746cb22dd0005a9ffd1c223da97 | p6@Fam70b |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr17:13983160..13983167, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_43170746cb22dd0005a9ffd1c223da97 | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr8:13425469..13425503, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_43170746cb22dd0005a9ffd1c223da97 | p2@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_43170746cb22dd0005a9ffd1c223da97 | p5@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr11:75421384..75421397, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_43170746cb22dd0005a9ffd1c223da97 | p21@Espn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_43170746cb22dd0005a9ffd1c223da97 | p2@Gpr152 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_43170746cb22dd0005a9ffd1c223da97 | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_43170746cb22dd0005a9ffd1c223da97 | p4@BC030867 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr13:48087761..48087775, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:42206784..42206793, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_43170746cb22dd0005a9ffd1c223da97 | p2@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_43170746cb22dd0005a9ffd1c223da97 | p2@Slc26a5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr6:86745686..86745727, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr11:4689776..4689785, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_43170746cb22dd0005a9ffd1c223da97 | p5@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_43170746cb22dd0005a9ffd1c223da97 | p2@Fscn2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_43170746cb22dd0005a9ffd1c223da97 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_43170746cb22dd0005a9ffd1c223da97 | p4@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr3:81012915..81012923, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr17:13983198..13983203, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr12:13508046..13508055, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_43170746cb22dd0005a9ffd1c223da97 | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_43170746cb22dd0005a9ffd1c223da97 | p7@Pkn3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_43170746cb22dd0005a9ffd1c223da97 | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_43170746cb22dd0005a9ffd1c223da97 | p3@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_43170746cb22dd0005a9ffd1c223da97 | p6@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:93235228..93235249, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr14:47293496..47293510, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr14:102297728..102297742, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr3:154459246..154459253, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr11:8405038..8405048, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr11:89702580..89702593, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_43170746cb22dd0005a9ffd1c223da97 | p4@Chrna10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_43170746cb22dd0005a9ffd1c223da97 | p7@Pkn3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_43170746cb22dd0005a9ffd1c223da97 | p1@Tmc1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr8:13414266..13414279, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr11:89702580..89702593, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_43170746cb22dd0005a9ffd1c223da97 | p1@Strc |
