UBERON:0010039: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=food storage organ | |name=food storage organ | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001555;;UBERON:0005409 | |part_of=UBERON:0001555;;UBERON:0005409 | ||
Latest revision as of 18:07, 12 September 2014
| Name: | food storage organ | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An organ of the digestive tract that is capable of retaining and storing food" [UBERON:cjm] | ||
| Xrefs: |
| ||
| Comments: | This is a very broad functionally defined grouping class that collects disparate structures from insects to vertebrates | ||
| Subset: |
functional_classification grouping_class |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0013765(digestive system element) |
|---|---|
| part_of: | UBERON:0001555(digestive tract),UBERON:0005409(gastrointestinal system) |
Children
| is a: | UBERON:0000945 (stomach) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10062-101H8 (stomach, fetal, donor1)
- 1035-18D5 (stomach, embryo E17)
- 10436-106E4 (signet ring carcinoma cell line:Kato III)
- 10459-106G9
- 10473-106I5
- 10516-107E3
- 10520-107E7
- 10529-107F7
- 10535-107G4
- 10549-107H9 (gastric cancer cell line:AZ521)
... further results Mouse (Mus musculus)
- 10062-101H8 (stomach, fetal, donor1)
- 1035-18D5 (stomach, embryo E17)
- 10436-106E4 (signet ring carcinoma cell line:Kato III)
- 10459-106G9
- 10473-106I5
- 10516-107E3
- 10520-107E7
- 10529-107F7
- 10535-107G4
- 10549-107H9 (gastric cancer cell line:AZ521)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010039 (food storage organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.57e-56 | FFCP PHASE2:Hg19::chr7:12997533..12997536,+#_a45b2c455f944c610d38735c3b8ebf13 | p@chr7:12997533..12997536, + |
| 4.57e-56 | FFCP PHASE1:Hg19::chr7:12997533..12997536,+#_a45b2c455f944c610d38735c3b8ebf13 | p@chr7:12997533..12997536, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr15:95561320..95561328,-#_69026c343b68b8b563782beace9d602b | p@chr15:95561320..95561328, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr9:79894790..79894797,+#_69026c343b68b8b563782beace9d602b | p10@VPS13A |
| 3.99e-50 | FFCP PHASE2:Hg19::chr21:28820892..28820899,-#_69026c343b68b8b563782beace9d602b | p4@ENST00000420186, p4@uc002ymh.2 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr9:124516729..124516752,+#_69026c343b68b8b563782beace9d602b | p@chr9:124516729..124516752, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr8:6594260..6594276,+#_69026c343b68b8b563782beace9d602b | p@chr8:6594260..6594276, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:1891326..1891337,-#_69026c343b68b8b563782beace9d602b | p@chr11:1891326..1891337, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr7:13045950..13045959,+#_69026c343b68b8b563782beace9d602b | p@chr7:13045950..13045959, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr10:98014943..98014960,-#_69026c343b68b8b563782beace9d602b | p@chr10:98014943..98014960, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr19:32401253..32401271,-#_69026c343b68b8b563782beace9d602b | p@chr19:32401253..32401271, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:56859608..56859619,-#_69026c343b68b8b563782beace9d602b | p@chr11:56859608..56859619, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr8:22424709..22424716,-#_69026c343b68b8b563782beace9d602b | p2@ENST00000517384 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr21:28820892..28820899,-#_69026c343b68b8b563782beace9d602b | p4@ENST00000420186, p4@uc002ymh.2 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:56859693..56859701,-#_69026c343b68b8b563782beace9d602b | p@chr11:56859693..56859701, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr6:152639579..152639586,-#_69026c343b68b8b563782beace9d602b | p60@SYNE1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr7:13045950..13045959,+#_69026c343b68b8b563782beace9d602b | p@chr7:13045950..13045959, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr9:127269434..127269438,-#_69026c343b68b8b563782beace9d602b | p8@NR5A1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr21:28820911..28820933,-#_69026c343b68b8b563782beace9d602b | p1@ENST00000420186, p1@uc002ymh.2 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr19:32401253..32401271,-#_69026c343b68b8b563782beace9d602b | p@chr19:32401253..32401271, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr9:133973310..133973321,+#_69026c343b68b8b563782beace9d602b | p18@AIF1L |
| 3.99e-50 | FFCP PHASE1:Hg19::chr8:22424709..22424716,-#_69026c343b68b8b563782beace9d602b | p2@ENST00000517384 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:56859584..56859589,-#_69026c343b68b8b563782beace9d602b | p@chr11:56859584..56859589, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr14:75904485..75904519,+#_69026c343b68b8b563782beace9d602b | p12@JDP2 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr8:47834174..47834213,+#_69026c343b68b8b563782beace9d602b | p1@ENST00000524012 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr6:152639579..152639586,-#_69026c343b68b8b563782beace9d602b | p60@SYNE1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr1:1064152..1064167,-#_69026c343b68b8b563782beace9d602b | p@chr1:1064152..1064167, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr9:127269434..127269438,-#_69026c343b68b8b563782beace9d602b | p8@NR5A1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr9:127260615..127260651,-#_69026c343b68b8b563782beace9d602b | p@chr9:127260615..127260651, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:56859638..56859643,-#_69026c343b68b8b563782beace9d602b | p@chr11:56859638..56859643, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr8:22424743..22424759,-#_69026c343b68b8b563782beace9d602b | p1@ENST00000517384 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr21:28820911..28820933,-#_69026c343b68b8b563782beace9d602b | p1@ENST00000420186, p1@uc002ymh.2 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr1:28520450..28520453,-#_69026c343b68b8b563782beace9d602b | p21@PTAFR |
| 3.99e-50 | FFCP PHASE1:Hg19::chr8:47834174..47834213,+#_69026c343b68b8b563782beace9d602b | p1@ENST00000524012 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr1:157811772..157811796,-#_69026c343b68b8b563782beace9d602b | p7@CD5L |
| 3.99e-50 | FFCP PHASE2:Hg19::chr7:22259740..22259751,-#_69026c343b68b8b563782beace9d602b | p19@RAPGEF5 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr14:75904485..75904519,+#_69026c343b68b8b563782beace9d602b | p12@JDP2 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr9:127269462..127269484,-#_69026c343b68b8b563782beace9d602b | p2@NR5A1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr21:28820941..28820952,-#_69026c343b68b8b563782beace9d602b | p2@ENST00000420186, p2@uc002ymh.2 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr9:127260615..127260651,-#_69026c343b68b8b563782beace9d602b | p@chr9:127260615..127260651, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr8:22424743..22424759,-#_69026c343b68b8b563782beace9d602b | p1@ENST00000517384 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr10:98014908..98014919,-#_69026c343b68b8b563782beace9d602b | p@chr10:98014908..98014919, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:56859603..56859606,-#_69026c343b68b8b563782beace9d602b | p@chr11:56859603..56859606, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr4:76901930..76901942,+#_69026c343b68b8b563782beace9d602b | p1@ENST00000501239 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr1:28520450..28520453,-#_69026c343b68b8b563782beace9d602b | p21@PTAFR |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:68365063..68365071,-#_69026c343b68b8b563782beace9d602b | p@chr17:68365063..68365071, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr1:157811772..157811796,-#_69026c343b68b8b563782beace9d602b | p7@CD5L |
| 3.99e-50 | FFCP PHASE1:Hg19::chr7:22259740..22259751,-#_69026c343b68b8b563782beace9d602b | p19@RAPGEF5 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr9:127269462..127269484,-#_69026c343b68b8b563782beace9d602b | p2@NR5A1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:56859693..56859701,-#_69026c343b68b8b563782beace9d602b | p@chr11:56859693..56859701, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr9:133973310..133973321,+#_69026c343b68b8b563782beace9d602b | p18@AIF1L |
| 3.99e-50 | FFCP PHASE2:Hg19::chr8:22436248..22436259,+#_69026c343b68b8b563782beace9d602b | p11@PDLIM2 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr21:28820941..28820952,-#_69026c343b68b8b563782beace9d602b | p2@ENST00000420186, p2@uc002ymh.2 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:68365063..68365071,-#_69026c343b68b8b563782beace9d602b | p@chr17:68365063..68365071, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr1:1064152..1064167,-#_69026c343b68b8b563782beace9d602b | p@chr1:1064152..1064167, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr4:76901930..76901942,+#_69026c343b68b8b563782beace9d602b | p1@ENST00000501239 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr1:159172187..159172197,-#_69026c343b68b8b563782beace9d602b | p1@uc001ftm.1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:1891326..1891337,-#_69026c343b68b8b563782beace9d602b | p@chr11:1891326..1891337, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr9:127269488..127269495,-#_69026c343b68b8b563782beace9d602b | p5@NR5A1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:925449..925458,+#_69026c343b68b8b563782beace9d602b | p17@AP2A2 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr21:28820954..28820963,-#_69026c343b68b8b563782beace9d602b | p3@ENST00000420186, p3@uc002ymh.2 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr16:84218794..84218800,+#_69026c343b68b8b563782beace9d602b | p@chr16:84218794..84218800, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chrX:69645652..69645664,+#_69026c343b68b8b563782beace9d602b | p7@GDPD2 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:56859584..56859589,-#_69026c343b68b8b563782beace9d602b | p@chr11:56859584..56859589, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr8:22436248..22436259,+#_69026c343b68b8b563782beace9d602b | p11@PDLIM2 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:78171885..78171900,+#_69026c343b68b8b563782beace9d602b | p@chr17:78171885..78171900, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr10:98014943..98014960,-#_69026c343b68b8b563782beace9d602b | p@chr10:98014943..98014960, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr15:95561320..95561328,-#_69026c343b68b8b563782beace9d602b | p@chr15:95561320..95561328, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr6:119812455..119812476,-#_69026c343b68b8b563782beace9d602b | p1@uc003pyn.1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr16:84218794..84218800,+#_69026c343b68b8b563782beace9d602b | p@chr16:84218794..84218800, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:56859608..56859619,-#_69026c343b68b8b563782beace9d602b | p@chr11:56859608..56859619, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:78171885..78171900,+#_69026c343b68b8b563782beace9d602b | p@chr17:78171885..78171900, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr1:159172187..159172197,-#_69026c343b68b8b563782beace9d602b | p1@uc001ftm.1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr9:127269488..127269495,-#_69026c343b68b8b563782beace9d602b | p5@NR5A1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr21:28820954..28820963,-#_69026c343b68b8b563782beace9d602b | p3@ENST00000420186, p3@uc002ymh.2 |
| 3.99e-50 | FFCP PHASE1:Hg19::chrX:69645652..69645664,+#_69026c343b68b8b563782beace9d602b | p7@GDPD2 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:925449..925458,+#_69026c343b68b8b563782beace9d602b | p17@AP2A2 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr6:119812455..119812476,-#_69026c343b68b8b563782beace9d602b | p1@uc003pyn.1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr9:79894790..79894797,+#_69026c343b68b8b563782beace9d602b | p10@VPS13A |
| 3.99e-50 | FFCP PHASE2:Hg19::chr10:98014908..98014919,-#_69026c343b68b8b563782beace9d602b | p@chr10:98014908..98014919, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr9:124516729..124516752,+#_69026c343b68b8b563782beace9d602b | p@chr9:124516729..124516752, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:56859603..56859606,-#_69026c343b68b8b563782beace9d602b | p@chr11:56859603..56859606, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr8:6594260..6594276,+#_69026c343b68b8b563782beace9d602b | p@chr8:6594260..6594276, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:56859638..56859643,-#_69026c343b68b8b563782beace9d602b | p@chr11:56859638..56859643, - |
| 5.04e-45 | FFCP PHASE1:Hg19::chr7:13545393..13545395,+#_148611769a25839bd0a2c1955d85af85 | p@chr7:13545393..13545395, + |
| 5.04e-45 | FFCP PHASE2:Hg19::chr7:13545393..13545395,+#_148611769a25839bd0a2c1955d85af85 | p@chr7:13545393..13545395, + |
| 5.86e-45 | FFCP PHASE2:Hg19::chr17:55185128..55185169,+#_60d203ead96bd70f5ad592ddf09aa531 | p@chr17:55185128..55185169, + |
| 5.86e-45 | FFCP PHASE1:Hg19::chr17:55185128..55185169,+#_60d203ead96bd70f5ad592ddf09aa531 | p@chr17:55185128..55185169, + |
| 3.37e-38 | FFCP PHASE1:Mm9::chr3:107019000..107019013,-#_a285e5181ac7bd74072619a4fea4abc7 | p@chr3:107019000..107019013, - |
| 3.37e-38 | FFCP PHASE2:Mm9::chr19:45224323..45224368,+#_a285e5181ac7bd74072619a4fea4abc7 | p@chr19:45224323..45224368, + |
| 3.37e-38 | FFCP PHASE1:Mm9::chr19:45224323..45224368,+#_a285e5181ac7bd74072619a4fea4abc7 | p@chr19:45224323..45224368, + |
| 3.37e-38 | FFCP PHASE2:Mm9::chr3:107019000..107019013,-#_a285e5181ac7bd74072619a4fea4abc7 | p@chr3:107019000..107019013, - |
| 1.02e-36 | FFCP PHASE1:Mm9::chr13:48758328..48758335,+#_e319b35bc59245f1d4c7ebc8b1a3a726 | p4@Barx1 |
| 1.02e-36 | FFCP PHASE2:Mm9::chr13:48758328..48758335,+#_e319b35bc59245f1d4c7ebc8b1a3a726 | p4@Barx1 |
| 5.31e-35 | FFCP PHASE2:Mm9::chr13:48758431..48758443,+#_c2e143e12650f91478f592fc292b4fd4 | p3@Barx1 |
| 5.31e-35 | FFCP PHASE1:Mm9::chr13:48758431..48758443,+#_c2e143e12650f91478f592fc292b4fd4 | p3@Barx1 |
| 7.22e-35 | FFCP PHASE2:Mm9::chr13:48758072..48758117,-#_e302eedfde517b1c50cfa3b582a33403 | p@chr13:48758072..48758117, - |
| 7.22e-35 | FFCP PHASE1:Mm9::chr13:48758072..48758117,-#_e302eedfde517b1c50cfa3b582a33403 | p@chr13:48758072..48758117, - |
| 6.5e-34 | FFCP PHASE1:Hg19::chr1:21011608..21011618,-#_7e1b5d83d0767f027a692f3a43fd6ef9 | p15@KIF17 |
| 6.5e-34 | FFCP PHASE1:Hg19::chr9:127267367..127267383,+#_7e1b5d83d0767f027a692f3a43fd6ef9 | p@chr9:127267367..127267383, + |
