FFCP PHASE1:Hg19::chr11:129903123..129903147,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC=39720 | |HGNC=HGNC:39720 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000526184,ENST00000535377_5end | |association_with_transcript=-8bp_to_ENST00000526184,ENST00000535377_5end | ||
|cluster_id=chr11:129903123..129903147,- | |||
|coexpression_cluster_id=C385 | |coexpression_cluster_id=C385 | ||
|description=CAGE_peak_1_at_TCEB2P2_5end | |description=CAGE_peak_1_at_TCEB2P2_5end | ||
Revision as of 19:57, 23 July 2015
| Short description: | p1@TCEB2P2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_TCEB2P2_5end |
| Coexpression cluster: | C385_Mesenchymal_Alveolar_Osteoblast_Smooth_Renal_Placental_Fibroblast |
| Association with transcript: | -8bp_to_ENST00000526184, ENST00000535377_5end |
| EntrezGene: | NA |
| HGNC: | 39720 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@TCEB2P2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 3.86e-22 | 250 |
| mesodermal cell | 7.70e-19 | 121 |
| electrically responsive cell | 3.19e-18 | 61 |
| electrically active cell | 3.19e-18 | 61 |
| muscle cell | 7.21e-17 | 55 |
| muscle precursor cell | 7.56e-17 | 58 |
| myoblast | 7.56e-17 | 58 |
| multi-potent skeletal muscle stem cell | 7.56e-17 | 58 |
| smooth muscle cell | 4.56e-15 | 43 |
| smooth muscle myoblast | 4.56e-15 | 43 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelial vesicle | 3.30e-19 | 78 |
| somite | 5.67e-18 | 71 |
| presomitic mesoderm | 5.67e-18 | 71 |
| presumptive segmental plate | 5.67e-18 | 71 |
| dermomyotome | 5.67e-18 | 71 |
| trunk paraxial mesoderm | 5.67e-18 | 71 |
| dense mesenchyme tissue | 5.92e-18 | 73 |
| paraxial mesoderm | 1.96e-17 | 72 |
| presumptive paraxial mesoderm | 1.96e-17 | 72 |
| skeletal muscle tissue | 3.50e-17 | 62 |
Showing 1 to 10 of 51 entries
