FFCP PHASE1:Hg19::chr11:46740744..46740786,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=2147 | |EntrezGene=entrezgene:2147 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=3535 | |HGNC=HGNC:3535 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=E9PIT3 | |UniProt=uniprot:E9PIT3 | ||
|association_with_transcript=0bp_to_ENST00000469189,ENST00000530231_5end | |association_with_transcript=0bp_to_ENST00000469189,ENST00000530231_5end | ||
|cluster_id=chr11:46740744..46740786,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_F2_5end | |description=CAGE_peak_1_at_F2_5end |
Revision as of 22:30, 23 July 2015
Short description: | p1@F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_F2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000469189, ENST00000530231_5end |
EntrezGene: | 2147 |
HGNC: | 3535 |
UniProt: | E9PIT3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@F2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.47e-29 | 12 |
embryonic stem cell | 4.53e-10 | 5 |
endodermal cell | 1.17e-09 | 58 |
melanocyte | 1.21e-08 | 10 |
melanoblast | 1.21e-08 | 10 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
liver | 3.17e-28 | 19 |
digestive gland | 3.17e-28 | 19 |
liver bud | 3.17e-28 | 19 |
hepatic diverticulum | 4.03e-24 | 22 |
liver primordium | 4.03e-24 | 22 |
digestive tract diverticulum | 5.44e-23 | 23 |
epithelial sac | 5.32e-21 | 25 |
epithelium of foregut-midgut junction | 5.32e-21 | 25 |
anatomical boundary | 5.32e-21 | 25 |
hepatobiliary system | 5.32e-21 | 25 |
Showing 1 to 10 of 28 entries