FFCP PHASE1:Hg19::chr14:89259268..89259310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=161436 | |EntrezGene=entrezgene:161436 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=18197 | |HGNC=HGNC:18197 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-111bp_to_uc001xxg.2_5end | |association_with_transcript=-111bp_to_uc001xxg.2_5end | ||
|cluster_id=chr14:89259268..89259310,- | |||
|coexpression_cluster_id=C2320 | |coexpression_cluster_id=C2320 | ||
|description=CAGE_peak_1_at_EML5_5end | |description=CAGE_peak_1_at_EML5_5end | ||
Revision as of 23:25, 24 July 2015
| Short description: | p1@EML5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_EML5_5end |
| Coexpression cluster: | C2320_neuroblastoma_cerebellum_retinoblastoma_pituitary_rectum_putamen_pineal |
| Association with transcript: | -111bp_to_uc001xxg.2_5end |
| EntrezGene: | 161436 |
| HGNC: | 18197 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@EML5 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 4.50e-61 | 56 |
| neural rod | 4.50e-61 | 56 |
| future spinal cord | 4.50e-61 | 56 |
| neural keel | 4.50e-61 | 56 |
| regional part of nervous system | 1.41e-56 | 53 |
| regional part of brain | 1.41e-56 | 53 |
| regional part of forebrain | 6.59e-46 | 41 |
| forebrain | 6.59e-46 | 41 |
| anterior neural tube | 6.59e-46 | 41 |
| future forebrain | 6.59e-46 | 41 |
Showing 1 to 10 of 65 entries
