FFCP PHASE1:Hg19::chr16:2802316..2802364,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=23524 | |EntrezGene=entrezgene:23524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=16639 | |HGNC=HGNC:16639 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q9UQ35,F5GWZ7 | |UniProt=uniprot:Q9UQ35,uniprot:F5GWZ7 | ||
|association_with_transcript=0bp_to_ENST00000301740,ENST00000382301,ENST00000396975,ENST00000544933,NM_016333,uc002crj.1,uc002crk.2_5end | |association_with_transcript=0bp_to_ENST00000301740,ENST00000382301,ENST00000396975,ENST00000544933,NM_016333,uc002crj.1,uc002crk.2_5end | ||
|cluster_id=chr16:2802316..2802364,+ | |||
|description=CAGE_peak_2_at_SRRM2_5end | |description=CAGE_peak_2_at_SRRM2_5end | ||
|id=chr16:2802316..2802364,+ | |id=chr16:2802316..2802364,+ | ||
Revision as of 07:34, 25 July 2015
| Short description: | p2@SRRM2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_SRRM2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000301740, ENST00000382301, ENST00000396975, ENST00000544933, NM_016333, uc002crj.1, uc002crk.2_5end |
| EntrezGene: | 23524 |
| HGNC: | 16639 |
| UniProt: | Q9UQ35F5GWZ7 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@SRRM2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 3.45e-10 | 56 |
| neural rod | 3.45e-10 | 56 |
| future spinal cord | 3.45e-10 | 56 |
| neural keel | 3.45e-10 | 56 |
| central nervous system | 1.35e-09 | 81 |
| regional part of nervous system | 1.54e-09 | 53 |
| regional part of brain | 1.54e-09 | 53 |
| nervous system | 1.77e-09 | 89 |
| regional part of forebrain | 3.52e-09 | 41 |
| forebrain | 3.52e-09 | 41 |
Showing 1 to 10 of 24 entries
