FFCP PHASE1:Hg19::chr1:144994910..144994932,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=9659 | |EntrezGene=entrezgene:9659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=15580 | |HGNC=HGNC:15580 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q5VU43,E9PJU0 | |UniProt=uniprot:Q5VU43,uniprot:E9PJU0 | ||
|association_with_transcript=0bp_to_ENST00000369354,ENST00000526445,ENST00000530472,ENST00000533845_5end | |association_with_transcript=0bp_to_ENST00000369354,ENST00000526445,ENST00000530472,ENST00000533845_5end | ||
|cluster_id=chr1:144994910..144994932,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_2_at_PDE4DIP_5end | |description=CAGE_peak_2_at_PDE4DIP_5end | ||
Revision as of 20:41, 27 July 2015
| Short description: | p2@PDE4DIP |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_PDE4DIP_5end |
| Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
| Association with transcript: | 0bp_to_ENST00000369354, ENST00000526445, ENST00000530472, ENST00000533845_5end |
| EntrezGene: | 9659 |
| HGNC: | 15580 |
| UniProt: | Q5VU43E9PJU0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@PDE4DIP |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cell of skeletal muscle | 8.42e-11 | 9 |
| chorionic membrane mesenchymal stem cell | 7.04e-08 | 3 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.74e-23 | 114 |
| cardiac chamber | 1.59e-08 | 3 |
| valve | 2.28e-08 | 3 |
| cardiac mesenchyme | 2.28e-08 | 3 |
| cardial valve | 2.28e-08 | 3 |
| tunica intima | 2.28e-08 | 3 |
| heart layer | 2.28e-08 | 3 |
| endocardium | 2.28e-08 | 3 |
| endocardial cushion | 2.28e-08 | 3 |
| presumptive endocardium | 2.28e-08 | 3 |
Showing 1 to 10 of 12 entries
