FFCP PHASE1:Hg19::chr22:43672014..43672021,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=53bp_to_ENST00000458463,uc003bdv.2_5end | |association_with_transcript=53bp_to_ENST00000458463,uc003bdv.2_5end | ||
|cluster_id=chr22:43672014..43672021,+ | |||
|description=CAGE_peak_1_at_ENST00000458463_5end,CAGE_peak_1_at_uc003bdv.2_5end | |description=CAGE_peak_1_at_ENST00000458463_5end,CAGE_peak_1_at_uc003bdv.2_5end | ||
|id=chr22:43672014..43672021,+ | |id=chr22:43672014..43672021,+ | ||
Latest revision as of 21:53, 28 July 2015
| Short description: | p1@ENST00000458463, p1@uc003bdv.2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ENST00000458463_5end, CAGE_peak_1_at_uc003bdv.2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 53bp_to_ENST00000458463, uc003bdv.2_5end |
| EntrezGene: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ENST00000458463p1@uc003bdv.2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| bladder cell | 4.06e-12 | 1 |
| lower urinary tract cell | 4.06e-12 | 1 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| bile duct | 2.74e-16 | 6 |
| digestive system duct | 2.74e-16 | 6 |
| urinary bladder urothelium | 4.06e-12 | 1 |
| wall of urinary bladder | 4.06e-12 | 1 |
| mucosa of urinary bladder | 4.06e-12 | 1 |
| hepatopancreatic ampulla | 8.64e-12 | 1 |
| extrahepatic bile duct | 8.64e-12 | 1 |
| common bile duct | 8.64e-12 | 1 |
| duodenal papilla | 8.64e-12 | 1 |
| biliary system | 4.69e-11 | 9 |
Showing 1 to 10 of 15 entries
| Ontology term | p-value | n |
|---|---|---|
| tubular adenocarcinoma | 3.53e-22 | 2 |
| cystadenocarcinoma | 3.27e-12 | 1 |
| mucinous cystadenocarcinoma | 3.27e-12 | 1 |
| osteosarcoma | 4.53e-12 | 1 |
| organ system benign neoplasm | 7.76e-12 | 1 |
| skin benign neoplasm | 7.76e-12 | 1 |
| integumentary system benign neoplasm | 7.76e-12 | 1 |
| dermis tumor | 7.76e-12 | 1 |
| cutaneous fibrous histiocytoma | 7.76e-12 | 1 |
| connective tissue cancer | 5.36e-08 | 6 |
Showing 1 to 10 of 11 entries
