FFCP PHASE1:Hg19::chr2:72803155..72803204,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:72803155..72803204,- | |||
|coexpression_cluster_id=C63 | |coexpression_cluster_id=C63 | ||
|description=CAGE_peak_at_chr2:72803155..72803204,- | |description=CAGE_peak_at_chr2:72803155..72803204,- | ||
Latest revision as of 12:06, 29 July 2015
| Short description: | p@chr2:72803155..72803204, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr2:72803155..72803204, - |
| Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr2:72803155..72803204- |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| androgen binding protein secreting cell | 2.39e-66 | 1 |
| seminiferous tubule epithelial cell | 2.39e-66 | 1 |
| Sertoli cell | 2.39e-66 | 1 |
| protein secreting cell | 2.45e-12 | 6 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| mesothelium | 2.39e-66 | 1 |
| seminiferous tubule of testis | 2.39e-66 | 1 |
| epithelium of male gonad | 2.39e-66 | 1 |
| epithelial cord | 2.39e-66 | 1 |
| sex cord | 2.39e-66 | 1 |
| seminiferous tubule epithelium | 2.39e-66 | 1 |
| testis sex cord | 2.39e-66 | 1 |
| genital ridge | 2.39e-66 | 1 |
| primitive sex cord of indifferent gonad | 2.39e-66 | 1 |
| coelomic epithelium | 2.39e-66 | 1 |
Showing 1 to 10 of 20 entries
| Ontology term | p-value | n |
|---|---|---|
| peripheral nerve sheath neoplasm | 7.05e-34 | 2 |
| neurofibroma | 7.05e-34 | 2 |
| neuroectodermal tumor | 2.38e-27 | 10 |
| peripheral nervous system neoplasm | 4.09e-23 | 3 |
| germ cell and embryonal cancer | 4.01e-13 | 22 |
| germ cell cancer | 4.01e-13 | 22 |
| neuroendocrine tumor | 2.74e-12 | 6 |
| nervous system cancer | 8.38e-07 | 11 |
Showing 1 to 8 of 8 entries
