FFCP PHASE1:Hg19::chr3:111260954..111260977,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=10225 | |EntrezGene=entrezgene:10225 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=16892 | |HGNC=HGNC:16892 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=P40200 | |UniProt=uniprot:P40200 | ||
|association_with_transcript=0bp_to_ENST00000283285_5end | |association_with_transcript=0bp_to_ENST00000283285_5end | ||
|cluster_id=chr3:111260954..111260977,+ | |||
|description=CAGE_peak_3_at_CD96_5end | |description=CAGE_peak_3_at_CD96_5end | ||
|id=chr3:111260954..111260977,+ | |id=chr3:111260954..111260977,+ | ||
Revision as of 14:10, 29 July 2015
| Short description: | p3@CD96 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_CD96_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000283285_5end |
| EntrezGene: | 10225 |
| HGNC: | 16892 |
| UniProt: | P40200 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@CD96 |
|---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| T cell | 1.42e-41 | 25 |
| pro-T cell | 1.42e-41 | 25 |
| lymphoid lineage restricted progenitor cell | 1.58e-41 | 52 |
| lymphocyte | 1.53e-40 | 53 |
| common lymphoid progenitor | 1.53e-40 | 53 |
| mature alpha-beta T cell | 3.18e-37 | 18 |
| alpha-beta T cell | 3.18e-37 | 18 |
| immature T cell | 3.18e-37 | 18 |
| mature T cell | 3.18e-37 | 18 |
| immature alpha-beta T cell | 3.18e-37 | 18 |
Showing 1 to 10 of 25 entries
| Ontology term | p-value | n |
|---|---|---|
| blood | 2.04e-24 | 15 |
| haemolymphatic fluid | 2.04e-24 | 15 |
| organism substance | 2.04e-24 | 15 |
| thymus | 3.02e-10 | 4 |
| hemolymphoid system gland | 3.02e-10 | 4 |
| thymic region | 3.02e-10 | 4 |
| pharyngeal gland | 3.02e-10 | 4 |
| thymus primordium | 3.02e-10 | 4 |
| hemopoietic organ | 3.29e-08 | 7 |
| immune organ | 3.29e-08 | 7 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| hematologic cancer | 2.64e-11 | 51 |
| immune system cancer | 2.64e-11 | 51 |
| leukemia | 6.84e-10 | 39 |
Showing 1 to 3 of 3 entries
