FFCP PHASE1:Hg19::chr3:14166567..14166598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=79188 | |EntrezGene=entrezgene:79188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=28472 | |HGNC=HGNC:28472 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=F8WDL3 | |UniProt=uniprot:F8WDL3 | ||
|association_with_transcript=52bp_to_ENST00000432444_5end | |association_with_transcript=52bp_to_ENST00000432444_5end | ||
|cluster_id=chr3:14166567..14166598,+ | |||
|coexpression_cluster_id=C4288 | |coexpression_cluster_id=C4288 | ||
|description=CAGE_peak_2_at_TMEM43_5end | |description=CAGE_peak_2_at_TMEM43_5end | ||
Revision as of 16:28, 29 July 2015
| Short description: | p2@TMEM43 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_TMEM43_5end |
| Coexpression cluster: | C4288_Fibroblast_amniotic_Smooth_Synoviocyte_salivary_gastric_Chondrocyte |
| Association with transcript: | 52bp_to_ENST00000432444_5end |
| EntrezGene: | 79188 |
| HGNC: | 28472 |
| UniProt: | F8WDL3 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@TMEM43 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 3.16e-16 | 76 |
| skin fibroblast | 1.52e-09 | 23 |
| embryonic cell | 2.62e-08 | 250 |
| extraembryonic cell | 5.64e-08 | 19 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| surface structure | 8.49e-15 | 99 |
| integument | 3.37e-11 | 46 |
| integumental system | 3.37e-11 | 46 |
| skin of body | 1.07e-10 | 41 |
| organ component layer | 4.40e-09 | 66 |
| multilaminar epithelium | 1.09e-07 | 83 |
| extraembryonic membrane | 1.33e-07 | 14 |
| membranous layer | 1.33e-07 | 14 |
| trunk | 1.53e-07 | 199 |
| mesoderm | 1.63e-07 | 315 |
Showing 1 to 10 of 12 entries
