FFCP PHASE1:Hg19::chr5:139494712..139494759,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5813 | |EntrezGene=entrezgene:5813 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=9701 | |HGNC=HGNC:9701 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_X91648_5end | |association_with_transcript=0bp_to_X91648_5end | ||
|cluster_id=chr5:139494712..139494759,+ | |||
|description=CAGE_peak_5_at_PURA_5end | |description=CAGE_peak_5_at_PURA_5end | ||
|id=chr5:139494712..139494759,+ | |id=chr5:139494712..139494759,+ |
Revision as of 10:27, 30 July 2015
Short description: | p5@PURA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PURA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_X91648_5end |
EntrezGene: | 5813 |
HGNC: | 9701 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@PURA |
---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.92e-27 | 56 |
neural rod | 2.92e-27 | 56 |
future spinal cord | 2.92e-27 | 56 |
neural keel | 2.92e-27 | 56 |
regional part of nervous system | 7.88e-25 | 53 |
regional part of brain | 7.88e-25 | 53 |
regional part of forebrain | 3.44e-21 | 41 |
forebrain | 3.44e-21 | 41 |
anterior neural tube | 3.44e-21 | 41 |
future forebrain | 3.44e-21 | 41 |
Showing 1 to 10 of 44 entries