FFCP PHASE1:Hg19::chr5:24644931..24644947,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=1008 | |EntrezGene=entrezgene:1008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=1749 | |HGNC=HGNC:1749 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q9Y6N8 | |UniProt=uniprot:Q9Y6N8 | ||
|association_with_transcript=-20bp_to_uc003jgr.1,uc011cnu.1_5end | |association_with_transcript=-20bp_to_uc003jgr.1,uc011cnu.1_5end | ||
|cluster_id=chr5:24644931..24644947,- | |||
|coexpression_cluster_id=C2820 | |coexpression_cluster_id=C2820 | ||
|description=CAGE_peak_4_at_CDH10_5end | |description=CAGE_peak_4_at_CDH10_5end |
Revision as of 14:12, 30 July 2015
Short description: | p4@CDH10 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDH10_5end |
Coexpression cluster: | C2820_pineal_epithelioid_cerebellum_occipital_temporal_parietal_myxofibrosarcoma |
Association with transcript: | -20bp_to_uc003jgr.1, uc011cnu.1_5end |
EntrezGene: | 1008 |
HGNC: | 1749 |
UniProt: | Q9Y6N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@CDH10 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 5.82e-07 | 3 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 1.16e-67 | 56 |
neural rod | 1.16e-67 | 56 |
future spinal cord | 1.16e-67 | 56 |
neural keel | 1.16e-67 | 56 |
regional part of nervous system | 1.61e-62 | 53 |
regional part of brain | 1.61e-62 | 53 |
central nervous system | 3.68e-56 | 81 |
brain | 6.64e-53 | 68 |
future brain | 6.64e-53 | 68 |
nervous system | 2.92e-51 | 89 |
Showing 1 to 10 of 73 entries
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.07e-07 | 3 |
leiomyoma | 1.07e-07 | 3 |
Showing 1 to 2 of 2 entries