FFCP PHASE1:Mm9::chr10:109437990..109437999,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:109437990..109437999,-|id=chr10:109437990..109437999,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!7.01e-09!10;UBERON:0000411!7.01e-09!10;UBERON:0001950!7.01e-09!10;UBERON:0000033!4.49e-08!63;UBERON:0003056!2.95e-07!49;UBERON:0000955!3.67e-07!50;UBERON:0006238!3.67e-07!50;UBERON:0002616!4.84e-07!49;UBERON:0002346!4.91e-07!71;UBERON:0003075!4.91e-07!71;UBERON:0007284!4.91e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.81e-22,10;UBERON:0000411,4.81e-22,10;UBERON:0001950,4.81e-22,10;UBERON:0002619,5.55e-12,17;UBERON:0000956,2.59e-11,21;UBERON:0001869,2.59e-11,21;UBERON:0000203,2.59e-11,21;UBERON:0003528,8.14e-09,29;UBERON:0002791,8.14e-09,29;UBERON:0001893,8.14e-09,29;UBERON:0002020,2.31e-08,34;UBERON:0003080,8.85e-08,40;UBERON:0000073,1.55e-07,54;UBERON:0002616,2.63e-07,46;UBERON:0000955,4.46e-07,47;UBERON:0006238,4.46e-07,47;UBERON:0001049,5.23e-07,52;UBERON:0005068,5.23e-07,52;UBERON:0006241,5.23e-07,52;UBERON:0007135,5.23e-07,52;UBERON:0002780,6.75e-07,39;UBERON:0001890,6.75e-07,39;UBERON:0006240,6.75e-07,39|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0.725827286159344,0,0.210324961351382,0,0,0.122490799214954,0.287536413054709,0,1.10115880999389,0.383062014255563,0.46081959976873,0,0.0914876436024097,0,0,1.12552522006336,0.916789486660861,1.17851434189467,0.427115042397309,0.372798891650601,0.151452386666368,0.453429360640713,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.461230994512117,0.60289056221049,0.352766121407114,0.125666591329675,0,0,0,1.13236794963186,0.220841518460394,0.484875253135222,0,0.292780797011547,1.04723353406728,0,0,0,0,1.19832511523858,0.915001205637253,0.251308704225729,1.91206752211504,1.79000820131231,0.62336413367868,0.973447578406546,0.305518091550949,0.497627882440372,1.0108910337347,0.210441855886474,0.130120442962704,0,0.540186389416048,0.452114453507145,0.612328492361951,1.0249097622788,0.374806898238915,0.258703370739016,0,0.378212160335639,0.351902248327898,0.657587197282725,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0.393528463494808,0.462801338662135,0.465067889500816,0.536546802799238,0.583826711835847,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.630869845692382,0.411618449517138,0,0,0,0.232236671860439,0.128867461322093,0.403367049246685,0,0.190225626112559,0.949058123089023,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.228497025219458,1.1270773567308,0.407302655690628,0,0.350679099451593,0.316182685621286,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0,0,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.551873492609465,0.160550589987792,0.703270119553219,0,0.504941854408746,0,0,0.646270193198397,0.477937595905104,0.668396022247182,1.13230612315533,0.809621403349789,0.584511715822624,0,0.321321316421807,0,0.534196811001766,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0.428674070063185,0.532020700926821,0.178368817602071,1.15184314421485,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.301564624640779,0,0,0,0.741701208042039,0.170870880797853,0.412773735926445,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.406638934253697,0.324016022465404,1.04544148007234,0.436725127492355,0,0.165306911450672,0.26175594198403,0,1.24267862617385,0,0,0.165458490457098,0,0.258319646955462,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0,0,0.810900861160657,0.821687657318618,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0.201932899896295,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,2.82375921308533,2.30162618253588,2.29158205375759,3.09335728218638,1.37016503954128,1.5107877947794,4.05013500139084,2.70192721934532,2.71885445390523,1.55328093525546,0.103787347584177,0,1.19513524027894,1.45864030240976,0.419226325255965,0.551530525350042,1.11123363900808,1.23621034343337,0.962757628775446,0.252697211763798,0.50695859978048,1.13175804831646,0.936415074698824,0.960377286073039,1.14870937911227,1.42888107384922,0.811190281613988,1.73618298417335,2.06042950401653,1.47198920134397,0.342869252385415,1.24233064311536,0.476872379894642,2.32554266611726,0.941093804153306,1.52306294205018,0.365855945745545,1.31534855718921,1.22223702461276,0,0.593175090620871,0.886540341380071,0,0.619747364743864,1.35034627686799,1.49886346762768,1.40358965067245,0.644613162144895,0.57386499620653,0.441182838239031,0.695603506861264|short_description=p@chr10:109437990..109437999,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:109437990..109437999,- | |||
|description=CAGE_peak_at_chr10:109437990..109437999,- | |||
|id=chr10:109437990..109437999,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!7.01e-09!10;UBERON:0000411!7.01e-09!10;UBERON:0001950!7.01e-09!10;UBERON:0000033!4.49e-08!63;UBERON:0003056!2.95e-07!49;UBERON:0000955!3.67e-07!50;UBERON:0006238!3.67e-07!50;UBERON:0002616!4.84e-07!49;UBERON:0002346!4.91e-07!71;UBERON:0003075!4.91e-07!71;UBERON:0007284!4.91e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.81e-22,10;UBERON:0000411,4.81e-22,10;UBERON:0001950,4.81e-22,10;UBERON:0002619,5.55e-12,17;UBERON:0000956,2.59e-11,21;UBERON:0001869,2.59e-11,21;UBERON:0000203,2.59e-11,21;UBERON:0003528,8.14e-09,29;UBERON:0002791,8.14e-09,29;UBERON:0001893,8.14e-09,29;UBERON:0002020,2.31e-08,34;UBERON:0003080,8.85e-08,40;UBERON:0000073,1.55e-07,54;UBERON:0002616,2.63e-07,46;UBERON:0000955,4.46e-07,47;UBERON:0006238,4.46e-07,47;UBERON:0001049,5.23e-07,52;UBERON:0005068,5.23e-07,52;UBERON:0006241,5.23e-07,52;UBERON:0007135,5.23e-07,52;UBERON:0002780,6.75e-07,39;UBERON:0001890,6.75e-07,39;UBERON:0006240,6.75e-07,39 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0.725827286159344,0,0.210324961351382,0,0,0.122490799214954,0.287536413054709,0,1.10115880999389,0.383062014255563,0.46081959976873,0,0.0914876436024097,0,0,1.12552522006336,0.916789486660861,1.17851434189467,0.427115042397309,0.372798891650601,0.151452386666368,0.453429360640713,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.461230994512117,0.60289056221049,0.352766121407114,0.125666591329675,0,0,0,1.13236794963186,0.220841518460394,0.484875253135222,0,0.292780797011547,1.04723353406728,0,0,0,0,1.19832511523858,0.915001205637253,0.251308704225729,1.91206752211504,1.79000820131231,0.62336413367868,0.973447578406546,0.305518091550949,0.497627882440372,1.0108910337347,0.210441855886474,0.130120442962704,0,0.540186389416048,0.452114453507145,0.612328492361951,1.0249097622788,0.374806898238915,0.258703370739016,0,0.378212160335639,0.351902248327898,0.657587197282725,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0.393528463494808,0.462801338662135,0.465067889500816,0.536546802799238,0.583826711835847,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.630869845692382,0.411618449517138,0,0,0,0.232236671860439,0.128867461322093,0.403367049246685,0,0.190225626112559,0.949058123089023,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.228497025219458,1.1270773567308,0.407302655690628,0,0.350679099451593,0.316182685621286,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0,0,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.551873492609465,0.160550589987792,0.703270119553219,0,0.504941854408746,0,0,0.646270193198397,0.477937595905104,0.668396022247182,1.13230612315533,0.809621403349789,0.584511715822624,0,0.321321316421807,0,0.534196811001766,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0.428674070063185,0.532020700926821,0.178368817602071,1.15184314421485,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.301564624640779,0,0,0,0.741701208042039,0.170870880797853,0.412773735926445,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.406638934253697,0.324016022465404,1.04544148007234,0.436725127492355,0,0.165306911450672,0.26175594198403,0,1.24267862617385,0,0,0.165458490457098,0,0.258319646955462,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0,0,0.810900861160657,0.821687657318618,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0.201932899896295,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,2.82375921308533,2.30162618253588,2.29158205375759,3.09335728218638,1.37016503954128,1.5107877947794,4.05013500139084,2.70192721934532,2.71885445390523,1.55328093525546,0.103787347584177,0,1.19513524027894,1.45864030240976,0.419226325255965,0.551530525350042,1.11123363900808,1.23621034343337,0.962757628775446,0.252697211763798,0.50695859978048,1.13175804831646,0.936415074698824,0.960377286073039,1.14870937911227,1.42888107384922,0.811190281613988,1.73618298417335,2.06042950401653,1.47198920134397,0.342869252385415,1.24233064311536,0.476872379894642,2.32554266611726,0.941093804153306,1.52306294205018,0.365855945745545,1.31534855718921,1.22223702461276,0,0.593175090620871,0.886540341380071,0,0.619747364743864,1.35034627686799,1.49886346762768,1.40358965067245,0.644613162144895,0.57386499620653,0.441182838239031,0.695603506861264 | |||
|short_description=p@chr10:109437990..109437999,- | |||
}} |
Latest revision as of 20:39, 3 August 2015
Short description: | p@chr10:109437990..109437999, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:109437990..109437999, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.81e-22 | 10 |
visual cortex | 4.81e-22 | 10 |
neocortex | 4.81e-22 | 10 |
regional part of cerebral cortex | 5.55e-12 | 17 |
cerebral cortex | 2.59e-11 | 21 |
cerebral hemisphere | 2.59e-11 | 21 |
pallium | 2.59e-11 | 21 |
brain grey matter | 8.14e-09 | 29 |
regional part of telencephalon | 8.14e-09 | 29 |
telencephalon | 8.14e-09 | 29 |
gray matter | 2.31e-08 | 34 |
anterior neural tube | 8.85e-08 | 40 |
regional part of nervous system | 1.55e-07 | 54 |
regional part of brain | 2.63e-07 | 46 |
brain | 4.46e-07 | 47 |
future brain | 4.46e-07 | 47 |
neural tube | 5.23e-07 | 52 |
neural rod | 5.23e-07 | 52 |
future spinal cord | 5.23e-07 | 52 |
neural keel | 5.23e-07 | 52 |
regional part of forebrain | 6.75e-07 | 39 |
forebrain | 6.75e-07 | 39 |
future forebrain | 6.75e-07 | 39 |