FFCP PHASE1:Mm9::chr19:30189839..30189855,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=54|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:30189839..30189855,-|id=chr19:30189839..30189855,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.42e-12,3;CL:0002202,1.42e-12,3;CL:0000069,1.42e-12,3;CL:0002632,1.42e-12,3;CL:0002368,1.42e-12,3;CL:0000307,1.42e-12,3;CL:0000377,1.42e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000945,8.17e-16,16;UBERON:0010039,8.17e-16,16;UBERON:0003126,1.42e-12,3;UBERON:0001005,1.42e-12,3;UBERON:0007196,1.42e-12,3;UBERON:0001558,1.42e-12,3;UBERON:0005409,2.77e-07,47|phase1_expression=0,0.697950815278722,0,0,0,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0,0,1.29228598847722,0.861884930743556,0,0,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,3.07970127575798,0,0,0,0,4.11615097657515,6.30373567865265,0.515672092277442,0,0,0,1.69422266034566,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0,0.307213066512487,0,0.0914876436024097,0,0,1.12552522006336,0.15279824777681,0,0.284743361598206,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.94841936910093,1.77351905832569,1.51657333504435,0.68510327831436,0.258937883647172,0,0,0.304465478312141,0,0.301445281105245,0.117588707135705,0,13.1013332899218,0.144599356919912,0,0,0,0,3.72783522436244,0,0,0.510914110417183,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0,0.340182495756639,0,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0.469052119962192,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.268412837520744,0,0,0,0,0,0,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0,0,0.238744688006273,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,22.9120948323627,0.790839983952838,1.01659733563424,1.62008011232702,3.3454127362315,5.8957892211468,9.97996163247673,10.579642332843,11.2555055053133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58711268530648,0,0.179427713218951,0,0.386379188064381,0.187682475451182,0,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0,0,0,0,0,0,0.342869252385415,0,0.715308569841963,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0.765153328275374,0,0|short_description=p@chr19:30189839..30189855,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=54 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:30189839..30189855,- | |||
|description=CAGE_peak_at_chr19:30189839..30189855,- | |||
|id=chr19:30189839..30189855,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.42e-12,3;CL:0002202,1.42e-12,3;CL:0000069,1.42e-12,3;CL:0002632,1.42e-12,3;CL:0002368,1.42e-12,3;CL:0000307,1.42e-12,3;CL:0000377,1.42e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,8.17e-16,16;UBERON:0010039,8.17e-16,16;UBERON:0003126,1.42e-12,3;UBERON:0001005,1.42e-12,3;UBERON:0007196,1.42e-12,3;UBERON:0001558,1.42e-12,3;UBERON:0005409,2.77e-07,47 | |||
|phase1_expression=0,0.697950815278722,0,0,0,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0,0,1.29228598847722,0.861884930743556,0,0,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,3.07970127575798,0,0,0,0,4.11615097657515,6.30373567865265,0.515672092277442,0,0,0,1.69422266034566,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0,0.307213066512487,0,0.0914876436024097,0,0,1.12552522006336,0.15279824777681,0,0.284743361598206,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.94841936910093,1.77351905832569,1.51657333504435,0.68510327831436,0.258937883647172,0,0,0.304465478312141,0,0.301445281105245,0.117588707135705,0,13.1013332899218,0.144599356919912,0,0,0,0,3.72783522436244,0,0,0.510914110417183,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0,0.340182495756639,0,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0.469052119962192,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.268412837520744,0,0,0,0,0,0,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0,0,0.238744688006273,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,22.9120948323627,0.790839983952838,1.01659733563424,1.62008011232702,3.3454127362315,5.8957892211468,9.97996163247673,10.579642332843,11.2555055053133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58711268530648,0,0.179427713218951,0,0.386379188064381,0.187682475451182,0,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0,0,0,0,0,0,0.342869252385415,0,0.715308569841963,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0.765153328275374,0,0 | |||
|short_description=p@chr19:30189839..30189855,- | |||
}} |
Latest revision as of 21:28, 3 August 2015
Short description: | p@chr19:30189839..30189855, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:30189839..30189855, - |
Coexpression cluster: | MCL_coexpression_mm9:54 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.42e-12 | 3 |
epithelial cell of tracheobronchial tree | 1.42e-12 | 3 |
branched duct epithelial cell | 1.42e-12 | 3 |
epithelial cell of lower respiratory tract | 1.42e-12 | 3 |
respiratory epithelial cell | 1.42e-12 | 3 |
tracheal epithelial cell | 1.42e-12 | 3 |
tracheoblast | 1.42e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 8.17e-16 | 16 |
food storage organ | 8.17e-16 | 16 |
trachea | 1.42e-12 | 3 |
respiratory airway | 1.42e-12 | 3 |
tracheobronchial tree | 1.42e-12 | 3 |
lower respiratory tract | 1.42e-12 | 3 |
gastrointestinal system | 2.77e-07 | 47 |