FFCP PHASE1:Mm9::chr7:116582300..116582351,-: Difference between revisions
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{{FFCP|EntrezGene=117229|HGNC=|MCL_coexpression_id=0|UniProt=Q924X7|association_with_transcript=0bp_to_ENSMUST00000121748_5end|description=CAGE_peak_1_at_Stk33_5end|id=chr7:116582300..116582351,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.26e-11!63;UBERON:0002346!7.31e-11!71;UBERON:0003075!7.31e-11!71;UBERON:0007284!7.31e-11!71;UBERON:0004121!1.69e-10!102;UBERON:0000924!1.69e-10!102;UBERON:0006601!1.69e-10!102;UBERON:0001017!5.38e-09!73;UBERON:0005743!5.38e-09!73;UBERON:0003056!1.03e-08!49;UBERON:0000073!1.23e-08!75;UBERON:0001016!1.23e-08!75;UBERON:0001049!3.74e-08!52;UBERON:0005068!3.74e-08!52;UBERON:0006241!3.74e-08!52;UBERON:0007135!3.74e-08!52;UBERON:0000955!2.16e-07!50;UBERON:0006238!2.16e-07!50;UBERON:0002048!3.70e-07!14;UBERON:0000117!3.70e-07!14;UBERON:0000171!3.70e-07!14;UBERON:0000170!3.70e-07!14;UBERON:0005597!3.70e-07!14;UBERON:0000118!3.70e-07!14;UBERON:0002616!6.05e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.44e-12,14;UBERON:0000117,1.44e-12,14;UBERON:0000171,1.44e-12,14;UBERON:0000170,1.44e-12,14;UBERON:0005597,1.44e-12,14;UBERON:0000118,1.44e-12,14;UBERON:0005153,7.93e-10,17;UBERON:0005178,7.93e-10,17;UBERON:0005181,7.93e-10,17;UBERON:0002224,7.93e-10,17;UBERON:0000915,7.93e-10,17;UBERON:0008947,7.93e-10,17;UBERON:0003258,7.93e-10,17;UBERON:0000007,4.32e-09,8;UBERON:0003296,4.32e-09,8;UBERON:0010133,4.32e-09,8;UBERON:0003056,5.95e-08,49;UBERON:0005157,6.35e-08,20;UBERON:0002346,4.68e-07,64;UBERON:0003075,4.68e-07,64;UBERON:0007284,4.68e-07,64;UBERON:0001894,5.33e-07,10;UBERON:0006222,5.33e-07,10|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.3132468360216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0.194429899074283,1.39986421625363,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,1.53687322128622,0.311068836925433,0,0,0.285650984403804,1.10434270475807,1.83736198822431,2.20444583341944,3.67687514644008,1.10115880999389,0.127687338085188,1.38245879930619,0.791317726381163,0.548925861614458,0,0,1.68828783009504,0.916789486660861,2.65165726926301,1.99320353118744,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,7.16266542671934,0,0,0,0.563373679106722,0,0,0,0,0,0,7.4219521817389,0,0.890652834388949,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,1.79748767285787,1.83000241127451,1.25654352112864,1.21677024134594,0.255715457330331,0.83115217823824,0.811206315338788,0.101839363850316,1.11966273549084,0.758168275301024,0.210441855886474,1.17108398666433,2.29902104433473,1.62055916824814,2.26057226753573,1.29269348387523,0.896796041993948,0.562210347358373,0.258703370739016,0.215567992932842,0.189106080167819,0.351902248327898,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0.219550115291051,0,1.68231958851302,0.823236899034275,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,1.01850340712568,0.287696137450811,0,0,0,1.11642284300551,0,0,0,0,13.1174765018289,0,0,0.509235257325564,1.40814148973101,4.35516269348721,9.52174563544055,6.82967767502296,2.83743259391144,2.6575762757853,2.87018583583477,3.60499292374624,3.7990696010497,7.95569822198314,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0,0,0.395287777946524,1.92792789853084,1.13552068166615,0.35613120733451,0,1.15479086080775,1.32745138339963,0,0,0.188605079755898,0,0,0,0,0,0,0,0,19.0646179222121,0.36012218806262,1.03486947026204,1.92903331528433,2.83744373827638,3.56737635204141,2.96188237083818,7.91608867697958,0.469343416127421,0.42366414172764,0,0.16488625294148,0,0.180938774784468,0,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0.621339313086926,397.403521772354,0,0,0.194451188344048,0.645799117388655,0,0.234714477291508,0.2604087696879,1.46803082195995,89.8692929472742,216.310534699657,0.316011120628178,0,0.102710957164827,0.129920822977795,0.537080087002444,0.596044064343795,0,0,0.201932899896295,0,0,0.292373642219257,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0.51776031175182,0.830298780673413,1.19707462020309,0.341467211508268,0.729320151204882,0.628839487883947,0.919217542250071,0.888986911206461,0.618105171716683,0.962757628775446,2.52697211763797,0.25347929989024,1.50901073108861,0.655490552289177,0.960377286073039,0.861532034334199,2.85776214769844,1.62238056322798,0.77163688185482,1.64834360321323,0.441596760403192,1.71434626192708,0.532427418478012,0.476872379894642,1.59881058295561,0.658765662907314,0.761531471025089,0.914639864363863,0.263069711437843,1.7654534799962,0.561142271657738,0.830445126869219,0.985044823755635,0.818462086339379,1.23949472948773,0.771626443924566,0.249810577937946,0.701794825336225,0.644613162144895,0.382576664137687,0,0.231867835620421|short_description=p1@Stk33}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:117229 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q924X7 | |||
|association_with_transcript=0bp_to_ENSMUST00000121748_5end | |||
|cluster_id=chr7:116582300..116582351,- | |||
|description=CAGE_peak_1_at_Stk33_5end | |||
|id=chr7:116582300..116582351,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.26e-11!63;UBERON:0002346!7.31e-11!71;UBERON:0003075!7.31e-11!71;UBERON:0007284!7.31e-11!71;UBERON:0004121!1.69e-10!102;UBERON:0000924!1.69e-10!102;UBERON:0006601!1.69e-10!102;UBERON:0001017!5.38e-09!73;UBERON:0005743!5.38e-09!73;UBERON:0003056!1.03e-08!49;UBERON:0000073!1.23e-08!75;UBERON:0001016!1.23e-08!75;UBERON:0001049!3.74e-08!52;UBERON:0005068!3.74e-08!52;UBERON:0006241!3.74e-08!52;UBERON:0007135!3.74e-08!52;UBERON:0000955!2.16e-07!50;UBERON:0006238!2.16e-07!50;UBERON:0002048!3.70e-07!14;UBERON:0000117!3.70e-07!14;UBERON:0000171!3.70e-07!14;UBERON:0000170!3.70e-07!14;UBERON:0005597!3.70e-07!14;UBERON:0000118!3.70e-07!14;UBERON:0002616!6.05e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.44e-12,14;UBERON:0000117,1.44e-12,14;UBERON:0000171,1.44e-12,14;UBERON:0000170,1.44e-12,14;UBERON:0005597,1.44e-12,14;UBERON:0000118,1.44e-12,14;UBERON:0005153,7.93e-10,17;UBERON:0005178,7.93e-10,17;UBERON:0005181,7.93e-10,17;UBERON:0002224,7.93e-10,17;UBERON:0000915,7.93e-10,17;UBERON:0008947,7.93e-10,17;UBERON:0003258,7.93e-10,17;UBERON:0000007,4.32e-09,8;UBERON:0003296,4.32e-09,8;UBERON:0010133,4.32e-09,8;UBERON:0003056,5.95e-08,49;UBERON:0005157,6.35e-08,20;UBERON:0002346,4.68e-07,64;UBERON:0003075,4.68e-07,64;UBERON:0007284,4.68e-07,64;UBERON:0001894,5.33e-07,10;UBERON:0006222,5.33e-07,10 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.3132468360216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0.194429899074283,1.39986421625363,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,1.53687322128622,0.311068836925433,0,0,0.285650984403804,1.10434270475807,1.83736198822431,2.20444583341944,3.67687514644008,1.10115880999389,0.127687338085188,1.38245879930619,0.791317726381163,0.548925861614458,0,0,1.68828783009504,0.916789486660861,2.65165726926301,1.99320353118744,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,7.16266542671934,0,0,0,0.563373679106722,0,0,0,0,0,0,7.4219521817389,0,0.890652834388949,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,1.79748767285787,1.83000241127451,1.25654352112864,1.21677024134594,0.255715457330331,0.83115217823824,0.811206315338788,0.101839363850316,1.11966273549084,0.758168275301024,0.210441855886474,1.17108398666433,2.29902104433473,1.62055916824814,2.26057226753573,1.29269348387523,0.896796041993948,0.562210347358373,0.258703370739016,0.215567992932842,0.189106080167819,0.351902248327898,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0.219550115291051,0,1.68231958851302,0.823236899034275,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,1.01850340712568,0.287696137450811,0,0,0,1.11642284300551,0,0,0,0,13.1174765018289,0,0,0.509235257325564,1.40814148973101,4.35516269348721,9.52174563544055,6.82967767502296,2.83743259391144,2.6575762757853,2.87018583583477,3.60499292374624,3.7990696010497,7.95569822198314,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0,0,0.395287777946524,1.92792789853084,1.13552068166615,0.35613120733451,0,1.15479086080775,1.32745138339963,0,0,0.188605079755898,0,0,0,0,0,0,0,0,19.0646179222121,0.36012218806262,1.03486947026204,1.92903331528433,2.83744373827638,3.56737635204141,2.96188237083818,7.91608867697958,0.469343416127421,0.42366414172764,0,0.16488625294148,0,0.180938774784468,0,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0.621339313086926,397.403521772354,0,0,0.194451188344048,0.645799117388655,0,0.234714477291508,0.2604087696879,1.46803082195995,89.8692929472742,216.310534699657,0.316011120628178,0,0.102710957164827,0.129920822977795,0.537080087002444,0.596044064343795,0,0,0.201932899896295,0,0,0.292373642219257,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0.51776031175182,0.830298780673413,1.19707462020309,0.341467211508268,0.729320151204882,0.628839487883947,0.919217542250071,0.888986911206461,0.618105171716683,0.962757628775446,2.52697211763797,0.25347929989024,1.50901073108861,0.655490552289177,0.960377286073039,0.861532034334199,2.85776214769844,1.62238056322798,0.77163688185482,1.64834360321323,0.441596760403192,1.71434626192708,0.532427418478012,0.476872379894642,1.59881058295561,0.658765662907314,0.761531471025089,0.914639864363863,0.263069711437843,1.7654534799962,0.561142271657738,0.830445126869219,0.985044823755635,0.818462086339379,1.23949472948773,0.771626443924566,0.249810577937946,0.701794825336225,0.644613162144895,0.382576664137687,0,0.231867835620421 | |||
|short_description=p1@Stk33 | |||
}} |
Revision as of 00:37, 4 August 2015
Short description: | p1@Stk33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Stk33_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000121748_5end |
EntrezGene: | 117229 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 1.44e-12 | 14 |
respiratory tube | 1.44e-12 | 14 |
respiration organ | 1.44e-12 | 14 |
pair of lungs | 1.44e-12 | 14 |
lung primordium | 1.44e-12 | 14 |
lung bud | 1.44e-12 | 14 |
epithelial bud | 7.93e-10 | 17 |
thoracic cavity element | 7.93e-10 | 17 |
thoracic segment organ | 7.93e-10 | 17 |
thoracic cavity | 7.93e-10 | 17 |
thoracic segment of trunk | 7.93e-10 | 17 |
respiratory primordium | 7.93e-10 | 17 |
endoderm of foregut | 7.93e-10 | 17 |
pituitary gland | 4.32e-09 | 8 |
gland of diencephalon | 4.32e-09 | 8 |
neuroendocrine gland | 4.32e-09 | 8 |
pre-chordal neural plate | 5.95e-08 | 49 |
epithelial fold | 6.35e-08 | 20 |
neurectoderm | 4.68e-07 | 64 |
neural plate | 4.68e-07 | 64 |
presumptive neural plate | 4.68e-07 | 64 |
diencephalon | 5.33e-07 | 10 |
future diencephalon | 5.33e-07 | 10 |