FFCP PHASE1:Mm9::chr19:4125837..4125863,-: Difference between revisions
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{{FFCP|EntrezGene=11632|HGNC=|MCL_coexpression_id=3|UniProt=O08915,D3YW40|association_with_transcript=0bp_to_ENSMUST00000117831,ENSMUST00000121402_5end|description=CAGE_peak_3_at_Aip_5end|id=chr19:4125837..4125863,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.08e-09!52;UBERON:0005068!1.08e-09!52;UBERON:0006241!1.08e-09!52;UBERON:0007135!1.08e-09!52;UBERON:0002616!1.11e-08!49;UBERON:0000955!1.40e-08!50;UBERON:0006238!1.40e-08!50;UBERON:0001017!2.68e-08!73;UBERON:0005743!2.68e-08!73;UBERON:0000073!1.50e-07!75;UBERON:0001016!1.50e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.40e-10,54;UBERON:0001049,9.94e-10,52;UBERON:0005068,9.94e-10,52;UBERON:0006241,9.94e-10,52;UBERON:0007135,9.94e-10,52;UBERON:0001017,2.73e-08,73;UBERON:0002616,1.25e-07,46;UBERON:0000955,1.56e-07,47;UBERON:0006238,1.56e-07,47;UBERON:0001016,1.71e-07,75|phase1_expression=2.7225304007815,5.23463111459042,7.27998783023258,3.32710632437513,4.50806156951712,2.18243053485457,3.03696432774183,0.774739940649458,0,0,0,0,0.171200729931206,1.22388563386596,3.66420737997229,5.06188168474565,1.39912375625629,0.630924330716475,1.50825876966313,0,3.23164502574065,1.29078236561151,1.30599894569468,1.59992422793407,1.83527424853736,5.7423196411502,3.01533397311352,3.01659725760245,2.09025761402011,2.01624103807945,1.55211357458713,3.17515336729816,0,0,0.577703239502549,1.16364251750945,0.612508068787107,20.5080499061085,15.626706890476,22.5115209908733,28.8233429135197,34.1522742479223,33.5002143591496,2.7697299954627,3.34543873024398,1.10128051297009,4.69434806608824,2.8343270329458,4.61340983742391,3.88859798148567,1.53985063787899,1.43752564364972,0.503347818173209,0.725362142011344,0.672187598284928,1.80081605225163,4.58453503902011,4.12537673821954,3.03474691289397,2.11596391708813,2.53532561402472,3.38844532069132,0.889294796111139,4.94944844504769,7.9109309005358,4.9733608046227,2.39680088414724,5.76327457982332,1.45165457231869,1.62007125998029,2.3135745748652,6.56997264128748,6.18431914664518,1.34739879136449,1.15014565221884,1.83843757322004,3.30347642998166,6.2566795661742,5.68344173048101,3.16527090552465,2.47016637726506,2.6045668527838,12.0048689570594,5.6276261003168,8.40390362772456,5.30331453852602,4.55589378557129,2.23679334990361,0.757261933331841,1.51143120213571,1.15945795480671,2.58127163094416,1.3599426674155,3.2382191498269,0.649776417447669,1.34408066129201,2.10666630197628,4.26075806445144,6.49465011507172,5.3000936176551,1.97180787687353,1.28326477414318,7.64415719119937,7.11066703153331,0.865964164044856,0.760079596425296,2.02209778005913,2.16949371466214,0.517875767294343,2.9688427812965,3.29622120855658,0.913396434936424,0.922461989024234,2.41156224884196,0.470354828542819,2.51333182659351,0.741584903203122,2.4581890676385,5.30766331169925,1.61766849947409,3.3126227769059,2.90925151881133,3.72783522436244,4.68449275218475,3.56059401582874,2.29911349687732,0.479260498023681,1.19980546198682,0.889491589511453,6.29120685500255,3.66000482254901,1.00523481690292,6.77914848749878,4.09144731728529,4.36354893575076,4.2182728397617,1.93494791315601,2.48813941220186,0.505445516867349,1.68353484709179,1.69156575851515,2.5289231487682,1.80062129805349,1.80845781402858,0.884474488967262,1.0249097622788,1.49922759295566,1.29351685369508,0.646703978798527,0.756424320671277,3.16712023495108,2.6303487891309,3.61461423993277,3.83077383174383,2.46938563689532,2.9855140022774,0,1.28673953557358,0.284163499395593,1.44988040774851,1.17263029990548,0.540186184383045,1.65721314909647,2.55793501271625,2.1597395804233,1.39520366850245,2.41446061259657,1.40118410840603,1.81015834904829,2.46251196118643,1.78351381000883,3.36259971078264,2.19550115291051,3.89198614405078,5.67782861123144,1.54356918568927,6.27795687669216,1.85115396664481,2.55945900642281,0.928946687441754,2.06187938115349,2.62188582010345,2.2237804384487,2.47293313946327,0,1.81168850196412,2.5133520880027,1.98956472041151,1.75467678407208,8.08937467788799,1.72910439899755,2.78797782556114,2.27601481143698,1.25673363870702,0,2.03651327845314,2.13347735884388,1.05203729835478,1.64414996523069,2.06654207171443,2.35498091762062,1.48076596706161,2.07516838961004,2.33583148002532,3.14494392181125,1.79889689907883,2.02860121388503,2.17059443777175,2.5462585178142,2.30156909960649,1.45921704097532,2.19649130550465,1.43768206527355,2.60498663367952,1.5601883655728,2.02063102357689,1.97337154874103,1.4473305640901,1.47802552133284,0.947457058852424,1.62964976442026,1.01847051465113,2.58159273117352,2.68010011906905,2.85652369063216,1.56106918286239,2.04925687338048,1.10732344824387,1.11618338060241,2.45794972073607,3.62638461918381,2.74833211304872,3.01582567878545,4.89515115436839,5.4094070032094,1.65562047782839,10.5963389391943,6.21221938938677,3.27869890753351,4.03953483526997,1.26203287766503,1.95219372148319,2.80050417052639,0.716906393857656,2.005188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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11632 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O08915,uniprot:D3YW40 | |||
|association_with_transcript=0bp_to_ENSMUST00000117831,ENSMUST00000121402_5end | |||
|cluster_id=chr19:4125837..4125863,- | |||
|description=CAGE_peak_3_at_Aip_5end | |||
|id=chr19:4125837..4125863,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.08e-09!52;UBERON:0005068!1.08e-09!52;UBERON:0006241!1.08e-09!52;UBERON:0007135!1.08e-09!52;UBERON:0002616!1.11e-08!49;UBERON:0000955!1.40e-08!50;UBERON:0006238!1.40e-08!50;UBERON:0001017!2.68e-08!73;UBERON:0005743!2.68e-08!73;UBERON:0000073!1.50e-07!75;UBERON:0001016!1.50e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.40e-10,54;UBERON:0001049,9.94e-10,52;UBERON:0005068,9.94e-10,52;UBERON:0006241,9.94e-10,52;UBERON:0007135,9.94e-10,52;UBERON:0001017,2.73e-08,73;UBERON:0002616,1.25e-07,46;UBERON:0000955,1.56e-07,47;UBERON:0006238,1.56e-07,47;UBERON:0001016,1.71e-07,75 | |||
|phase1_expression=2.7225304007815,5.23463111459042,7.27998783023258,3.32710632437513,4.50806156951712,2.18243053485457,3.03696432774183,0.774739940649458,0,0,0,0,0.171200729931206,1.22388563386596,3.66420737997229,5.06188168474565,1.39912375625629,0.630924330716475,1.50825876966313,0,3.23164502574065,1.29078236561151,1.30599894569468,1.59992422793407,1.83527424853736,5.7423196411502,3.01533397311352,3.01659725760245,2.09025761402011,2.01624103807945,1.55211357458713,3.17515336729816,0,0,0.577703239502549,1.16364251750945,0.612508068787107,20.5080499061085,15.626706890476,22.5115209908733,28.8233429135197,34.1522742479223,33.5002143591496,2.7697299954627,3.34543873024398,1.10128051297009,4.69434806608824,2.8343270329458,4.61340983742391,3.88859798148567,1.53985063787899,1.43752564364972,0.503347818173209,0.725362142011344,0.672187598284928,1.80081605225163,4.58453503902011,4.12537673821954,3.03474691289397,2.11596391708813,2.53532561402472,3.38844532069132,0.889294796111139,4.94944844504769,7.9109309005358,4.9733608046227,2.39680088414724,5.76327457982332,1.45165457231869,1.62007125998029,2.3135745748652,6.56997264128748,6.18431914664518,1.34739879136449,1.15014565221884,1.83843757322004,3.30347642998166,6.2566795661742,5.68344173048101,3.16527090552465,2.47016637726506,2.6045668527838,12.0048689570594,5.6276261003168,8.40390362772456,5.30331453852602,4.55589378557129,2.23679334990361,0.757261933331841,1.51143120213571,1.15945795480671,2.58127163094416,1.3599426674155,3.2382191498269,0.649776417447669,1.34408066129201,2.10666630197628,4.26075806445144,6.49465011507172,5.3000936176551,1.97180787687353,1.28326477414318,7.64415719119937,7.11066703153331,0.865964164044856,0.760079596425296,2.02209778005913,2.16949371466214,0.517875767294343,2.9688427812965,3.29622120855658,0.913396434936424,0.922461989024234,2.41156224884196,0.470354828542819,2.51333182659351,0.741584903203122,2.4581890676385,5.30766331169925,1.61766849947409,3.3126227769059,2.90925151881133,3.72783522436244,4.68449275218475,3.56059401582874,2.29911349687732,0.479260498023681,1.19980546198682,0.889491589511453,6.29120685500255,3.66000482254901,1.00523481690292,6.77914848749878,4.09144731728529,4.36354893575076,4.2182728397617,1.93494791315601,2.48813941220186,0.505445516867349,1.68353484709179,1.69156575851515,2.5289231487682,1.80062129805349,1.80845781402858,0.884474488967262,1.0249097622788,1.49922759295566,1.29351685369508,0.646703978798527,0.756424320671277,3.16712023495108,2.6303487891309,3.61461423993277,3.83077383174383,2.46938563689532,2.9855140022774,0,1.28673953557358,0.284163499395593,1.44988040774851,1.17263029990548,0.540186184383045,1.65721314909647,2.55793501271625,2.1597395804233,1.39520366850245,2.41446061259657,1.40118410840603,1.81015834904829,2.46251196118643,1.78351381000883,3.36259971078264,2.19550115291051,3.89198614405078,5.67782861123144,1.54356918568927,6.27795687669216,1.85115396664481,2.55945900642281,0.928946687441754,2.06187938115349,2.62188582010345,2.2237804384487,2.47293313946327,0,1.81168850196412,2.5133520880027,1.98956472041151,1.75467678407208,8.08937467788799,1.72910439899755,2.78797782556114,2.27601481143698,1.25673363870702,0,2.03651327845314,2.13347735884388,1.05203729835478,1.64414996523069,2.06654207171443,2.35498091762062,1.48076596706161,2.07516838961004,2.33583148002532,3.14494392181125,1.79889689907883,2.02860121388503,2.17059443777175,2.5462585178142,2.30156909960649,1.45921704097532,2.19649130550465,1.43768206527355,2.60498663367952,1.5601883655728,2.02063102357689,1.97337154874103,1.4473305640901,1.47802552133284,0.947457058852424,1.62964976442026,1.01847051465113,2.58159273117352,2.68010011906905,2.85652369063216,1.56106918286239,2.04925687338048,1.10732344824387,1.11618338060241,2.45794972073607,3.62638461918381,2.74833211304872,3.01582567878545,4.89515115436839,5.4094070032094,1.65562047782839,10.5963389391943,6.21221938938677,3.27869890753351,4.03953483526997,1.26203287766503,1.95219372148319,2.80050417052639,0.716906393857656,2.00518806674155,2.83076530788832,1.61924280669958,1.16902343164525,1.97643888973262,2.24924921495265,2.55492153374884,4.98583690268315,2.60619134965722,2.63952196756057,1.32745138339963,2.91336763385978,1.209294227859,2.07465587731488,3.83892460745005,2.15204603560749,1.80899805217755,2.18120237686503,1.78248689192361,1.58018378967908,0,2.06271086496374,3.06395645178409,2.34079422240703,3.23396709456886,3.42939256050548,1.95074257006501,3.21063871683727,2.13913726782757,3.04464949114599,0.704015124191131,0.63549621259146,2.20528398054962,1.31909002353184,1.61464426695906,1.38719727334758,2.50681922406587,1.64140899745061,1.7488850197791,9.82754100655701,4.27177201994632,4.12773735926445,3.33350149265481,3.20226376907975,4.92099219795691,5.94823250336959,0.169978429993855,0.69975726161829,0.414599921413271,1.90934123603023,1.10717597753397,2.23651413839534,0.86404272657441,1.88179466413022,3.05707589244649,1.21377911746339,1.57041565878138,2.87931536182433,2.4626844925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| |||
|short_description=p3@Aip | |||
}} |
Revision as of 02:11, 4 August 2015
Short description: | p3@Aip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Aip_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000117831, ENSMUST00000121402_5end |
EntrezGene: | 11632 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.40e-10 | 54 |
neural tube | 9.94e-10 | 52 |
neural rod | 9.94e-10 | 52 |
future spinal cord | 9.94e-10 | 52 |
neural keel | 9.94e-10 | 52 |
central nervous system | 2.73e-08 | 73 |
regional part of brain | 1.25e-07 | 46 |
brain | 1.56e-07 | 47 |
future brain | 1.56e-07 | 47 |
nervous system | 1.71e-07 | 75 |