FFCP PHASE1:Mm9::chr3:84074640..84074657,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=80890|HGNC=|MCL_coexpression_id=474|UniProt=|association_with_transcript=0bp_to_uc008ppy.2_5end|description=CAGE_peak_6_at_Trim2_5end|id=chr3:84074640..84074657,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,1.22e-08,9;CL:0002251,1.22e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.04e-17!59;UBERON:0000160!6.46e-15!43;UBERON:0000344!6.77e-10!15;UBERON:0001242!6.37e-09!13;UBERON:0000060!6.37e-09!13;UBERON:0001262!6.37e-09!13;UBERON:0004786!6.37e-09!13;UBERON:0004923!8.40e-08!24;UBERON:0000485!1.28e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.56e-26,31;UBERON:0005409,2.93e-24,47;UBERON:0000344,3.42e-13,15;UBERON:0001242,7.78e-12,13;UBERON:0001262,7.78e-12,13;UBERON:0004786,7.78e-12,13;UBERON:0000485,5.09e-10,11;UBERON:0004923,7.12e-09,24;UBERON:0003350,1.22e-08,9;UBERON:0004808,1.22e-08,9;UBERON:0001277,1.22e-08,9;UBERON:0011216,8.34e-07,194|phase1_expression=3.84357233051505,12.563114675017,11.8299802241279,9.67885476181856,7.01254021924886,13.9339795686869,10.7461814673942,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0,0,0,0,1.19060606211498,0,0,10.8794847499517,9.86459908588831,9.76194338995534,20.2458138194765,10.1271479362368,22.6127869153085,23.4388020676736,13.5255611499736,0,0,0,32.9290846516453,32.9144597809815,32.054588933192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.622137673850866,0.540023753326763,0,0.285650984403804,0.883474163806454,0,0.191690942036473,0,18.7196997698961,17.2377906415003,13.0565553267807,0,0,0,13.1216009530649,8.4414391504752,8.09830713217094,0.883885756421003,0.854230084794618,0.931997229126503,0,0.604572480854284,0.289864488701678,0,0,0,0,0,0.702222100658759,0.681721290312231,0,0,17.182897212755,0,0,0,0.649473123033642,0.760079596425296,0,1.82694207550496,0,0.148442139064825,0.520455980298408,0.608930956624282,0.230615497256059,1.3565037649736,0.705532242814229,0.251333182659351,0,0.289198713839823,2.65383165584962,0.647067399789637,0.883366073841574,0,26.0948465705371,6.44117753425404,3.35114730901528,19.4147361958529,0,0,0,13.3313669070292,14.640019290196,0,6.08385120672968,0.767146371990992,17.6619837875626,6.48965052271031,0.305518091550949,0.497627882440372,0.252722758433675,0.841767423545896,0.390361328888111,0,0,0.30140963567143,0.136072998302656,0,0.187403449119458,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0,0,0,0.308534225774757,0,0,0,0,0,0.243206428637567,0.146199987425332,0,0.134206418760372,6.72927835405207,0.102904612379284,4.62586296177317,12.9580777665137,2.34617075588757,3.0190767341857,9.14958975386863,12.1010114774006,12.6755484991576,12.3646656973163,18.9811624617805,11.1995289212327,8.79673230800943,11.1415624343044,11.307917052909,13.4822911298133,25.5042898852139,27.2823544358483,2.84501851429623,2.97046132785295,1.1270773567308,2.8511185898344,3.49114476901726,2.10407459670956,1.01178459398812,0.590440591918409,0.784993639206874,0.493588655687202,0,1.00107063429656,1.96558995113203,1.34917267430912,1.62288097110802,0.482354319504834,1.78238096246994,0.863088412352432,0.648540907100142,1.64736847912849,0,0.372140947668503,0.936113019343682,0.252578877947112,0.179397413521912,0,0,0.189491411770485,0,0.169745085775188,0.469380496577004,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,24.8853414481078,14.0654023910644,0,0.252470927204373,0,0,0.215423397732799,1.43381278771531,0.222798674082394,0.283076530788832,0,0.584511715822624,0,2.89189184779626,0.283880170416537,0.35613120733451,0,0.329940245945071,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0,0.614870295887855,2.06742634534577,0.363533729477506,0.712994756769443,0,2.10837217149998,0,0,0.540183282093931,0.388076051348264,0,0.177340233642274,0.356737635204141,1.31639216481697,0.304464949114599,0.704015124191131,0.21183207086382,0.882113592219848,0.16488625294148,0.322928853391811,0.180938774784468,0.477489376012546,0,15.7399651780119,27.8137953015765,0.854354403989263,0,0.555583582109135,2.26042148405629,1.77702496037333,1.60144721244566,0,0,0.138199973804424,0.954670618015114,0.474503990371703,1.82987520414164,2.26811215725783,1.04544148007234,1.74690050996942,1.61837215661785,0.826534557253359,2.87931536182433,42.9025561595834,6.21339313086926,0,1.19613236835183,1.15820943319968,0.194451188344048,0.516639293910924,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,2.19781949120718,1.2862102744744,0.501572104035363,0,0,0.572895513439397,0,2.05524755931193,1.5107877947794,2.70009000092722,2.2516060161211,2.71885445390523,2.5888015587591,2.07574695168353,0.798049746802062,0.341467211508268,0.486213434136588,1.67690530102386,1.2869045591501,0.888986911206461,2.26638562962784,1.28367683836726,1.26348605881899,1.2673964994512,0.377252682772152,1.77918864192777,1.28050304809739,1.26358031702349,2.38146845641537,1.27472758539341,1.15745532278223,1.64834360321323,1.76638704161277,0.342869252385415,0.354951612318675,1.90748951957857,0.872078499793971,1.12931256498397,1.18460451048347,0.914639864363863,1.57841826862706,0.814824683075171,1.12228454331548,1.42362021749009,1.37906275325789,0.409231043169689,1.23949472948773,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,1.72159498861959,0.882365676478062,0.463735671240843|short_description=p6@Trim2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:80890 | |||
|HGNC= | |||
|MCL_coexpression_id=474 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc008ppy.2_5end | |||
|cluster_id=chr3:84074640..84074657,- | |||
|description=CAGE_peak_6_at_Trim2_5end | |||
|id=chr3:84074640..84074657,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.22e-08,9;CL:0002251,1.22e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.04e-17!59;UBERON:0000160!6.46e-15!43;UBERON:0000344!6.77e-10!15;UBERON:0001242!6.37e-09!13;UBERON:0000060!6.37e-09!13;UBERON:0001262!6.37e-09!13;UBERON:0004786!6.37e-09!13;UBERON:0004923!8.40e-08!24;UBERON:0000485!1.28e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.56e-26,31;UBERON:0005409,2.93e-24,47;UBERON:0000344,3.42e-13,15;UBERON:0001242,7.78e-12,13;UBERON:0001262,7.78e-12,13;UBERON:0004786,7.78e-12,13;UBERON:0000485,5.09e-10,11;UBERON:0004923,7.12e-09,24;UBERON:0003350,1.22e-08,9;UBERON:0004808,1.22e-08,9;UBERON:0001277,1.22e-08,9;UBERON:0011216,8.34e-07,194 | |||
|phase1_expression=3.84357233051505,12.563114675017,11.8299802241279,9.67885476181856,7.01254021924886,13.9339795686869,10.7461814673942,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0,0,0,0,1.19060606211498,0,0,10.8794847499517,9.86459908588831,9.76194338995534,20.2458138194765,10.1271479362368,22.6127869153085,23.4388020676736,13.5255611499736,0,0,0,32.9290846516453,32.9144597809815,32.054588933192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.622137673850866,0.540023753326763,0,0.285650984403804,0.883474163806454,0,0.191690942036473,0,18.7196997698961,17.2377906415003,13.0565553267807,0,0,0,13.1216009530649,8.4414391504752,8.09830713217094,0.883885756421003,0.854230084794618,0.931997229126503,0,0.604572480854284,0.289864488701678,0,0,0,0,0,0.702222100658759,0.681721290312231,0,0,17.182897212755,0,0,0,0.649473123033642,0.760079596425296,0,1.82694207550496,0,0.148442139064825,0.520455980298408,0.608930956624282,0.230615497256059,1.3565037649736,0.705532242814229,0.251333182659351,0,0.289198713839823,2.65383165584962,0.647067399789637,0.883366073841574,0,26.0948465705371,6.44117753425404,3.35114730901528,19.4147361958529,0,0,0,13.3313669070292,14.640019290196,0,6.08385120672968,0.767146371990992,17.6619837875626,6.48965052271031,0.305518091550949,0.497627882440372,0.252722758433675,0.841767423545896,0.390361328888111,0,0,0.30140963567143,0.136072998302656,0,0.187403449119458,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0,0,0,0.308534225774757,0,0,0,0,0,0.243206428637567,0.146199987425332,0,0.134206418760372,6.72927835405207,0.102904612379284,4.62586296177317,12.9580777665137,2.34617075588757,3.0190767341857,9.14958975386863,12.1010114774006,12.6755484991576,12.3646656973163,18.9811624617805,11.1995289212327,8.79673230800943,11.1415624343044,11.307917052909,13.4822911298133,25.5042898852139,27.2823544358483,2.84501851429623,2.97046132785295,1.1270773567308,2.8511185898344,3.49114476901726,2.10407459670956,1.01178459398812,0.590440591918409,0.784993639206874,0.493588655687202,0,1.00107063429656,1.96558995113203,1.34917267430912,1.62288097110802,0.482354319504834,1.78238096246994,0.863088412352432,0.648540907100142,1.64736847912849,0,0.372140947668503,0.936113019343682,0.252578877947112,0.179397413521912,0,0,0.189491411770485,0,0.169745085775188,0.469380496577004,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,24.8853414481078,14.0654023910644,0,0.252470927204373,0,0,0.215423397732799,1.43381278771531,0.222798674082394,0.283076530788832,0,0.584511715822624,0,2.89189184779626,0.283880170416537,0.35613120733451,0,0.329940245945071,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0,0.614870295887855,2.06742634534577,0.363533729477506,0.712994756769443,0,2.10837217149998,0,0,0.540183282093931,0.388076051348264,0,0.177340233642274,0.356737635204141,1.31639216481697,0.304464949114599,0.704015124191131,0.21183207086382,0.882113592219848,0.16488625294148,0.322928853391811,0.180938774784468,0.477489376012546,0,15.7399651780119,27.8137953015765,0.854354403989263,0,0.555583582109135,2.26042148405629,1.77702496037333,1.60144721244566,0,0,0.138199973804424,0.954670618015114,0.474503990371703,1.82987520414164,2.26811215725783,1.04544148007234,1.74690050996942,1.61837215661785,0.826534557253359,2.87931536182433,42.9025561595834,6.21339313086926,0,1.19613236835183,1.15820943319968,0.194451188344048,0.516639293910924,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,2.19781949120718,1.2862102744744,0.501572104035363,0,0,0.572895513439397,0,2.05524755931193,1.5107877947794,2.70009000092722,2.2516060161211,2.71885445390523,2.5888015587591,2.07574695168353,0.798049746802062,0.341467211508268,0.486213434136588,1.67690530102386,1.2869045591501,0.888986911206461,2.26638562962784,1.28367683836726,1.26348605881899,1.2673964994512,0.377252682772152,1.77918864192777,1.28050304809739,1.26358031702349,2.38146845641537,1.27472758539341,1.15745532278223,1.64834360321323,1.76638704161277,0.342869252385415,0.354951612318675,1.90748951957857,0.872078499793971,1.12931256498397,1.18460451048347,0.914639864363863,1.57841826862706,0.814824683075171,1.12228454331548,1.42362021749009,1.37906275325789,0.409231043169689,1.23949472948773,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,1.72159498861959,0.882365676478062,0.463735671240843 | |||
|short_description=p6@Trim2 | |||
}} |
Revision as of 02:14, 4 August 2015
Short description: | p6@Trim2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Trim2_5end |
Coexpression cluster: | MCL_coexpression_mm9:474 |
Association with transcript: | 0bp_to_uc008ppy.2_5end |
EntrezGene: | 80890 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.22e-08 | 9 |
epithelial cell of alimentary canal | 1.22e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.56e-26 | 31 |
gastrointestinal system | 2.93e-24 | 47 |
mucosa | 3.42e-13 | 15 |
intestinal mucosa | 7.78e-12 | 13 |
wall of intestine | 7.78e-12 | 13 |
gastrointestinal system mucosa | 7.78e-12 | 13 |
simple columnar epithelium | 5.09e-10 | 11 |
organ component layer | 7.12e-09 | 24 |
epithelium of mucosa | 1.22e-08 | 9 |
gastrointestinal system epithelium | 1.22e-08 | 9 |
intestinal epithelium | 1.22e-08 | 9 |
organ system subdivision | 8.34e-07 | 194 |