FFCP PHASE1:Mm9::chr10:13807669..13807675,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=279|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:13807669..13807675,+|id=chr10:13807669..13807675,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000624,2.94e-08,8;CL:0000107,1.07e-07,9;CL:0000791,4.28e-07,9;CL:0000789,4.28e-07,9;CL:0002420,4.28e-07,9;CL:0002419,4.28e-07,9;CL:0000790,4.28e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!2.77e-07!10;UBERON:0000411!2.77e-07!10;UBERON:0001950!2.77e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.25e-11,10;UBERON:0000411,5.25e-11,10;UBERON:0001950,5.25e-11,10;UBERON:0003408,1.48e-08,24;UBERON:0002370,4.34e-08,23;UBERON:0000974,4.34e-08,23;UBERON:0004807,4.34e-08,23;UBERON:0005058,4.34e-08,23;UBERON:0003351,4.34e-08,23;UBERON:0009113,4.34e-08,23;UBERON:0003295,4.34e-08,23;UBERON:0009722,4.34e-08,23;UBERON:0005562,4.34e-08,23;UBERON:0007690,4.34e-08,23;UBERON:0002410,1.07e-07,9;UBERON:0006562,1.50e-07,24;UBERON:0001557,1.50e-07,24;UBERON:0001042,1.50e-07,24;UBERON:0008814,1.50e-07,24;UBERON:0009145,1.50e-07,24;UBERON:0000072,4.75e-07,27;UBERON:0000956,8.07e-07,21;UBERON:0001869,8.07e-07,21;UBERON:0000203,8.07e-07,21|phase1_expression=0.160148847104794,0.697950815278722,0.909998478779072,0.60492842261366,0,0.839396359559449,1.16806320297763,8.78038599402719,1.83025338797167,14.9801296846076,1.54096171402954,11.0883301003518,1.19840510951844,5.76974655965383,0,1.01237633694913,0,0.788655413395594,2.33094537129756,1.69755860719212,6.4632900514813,0,0.261199789138935,1.43993180514066,3.21172993494038,1.14846392823004,0,0.215471232685889,0.760093677825496,1.00812051903972,0.886922042621219,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,5.5394599909254,2.83855407414641,4.22157529971868,0,0,0,0,0,0,2.01339127269284,1.45072428402269,0.672187598284928,0.514518872071894,1.14613375975503,0,0,0,0,0,0.889294796111139,0,0,0,0,0,1.03689612308478,1.08004750665353,0.420649922702764,0.571301968807607,0.441737081903227,0.122490799214954,0,0.919218786610021,0,0.638436690425939,1.22885226604995,0,0.182975287204819,0.52091337055676,0.279182999001381,1.12552522006336,0.916789486660861,1.17851434189467,2.13557521198654,0.186399445825301,0.37863096666592,0.151143120213571,0.289864488701678,0,0,1.61910957491345,0,0,2.66844398250329,0.170430322578058,0.259786004602869,0,0.422530259330042,2.56652954828636,0,0,0.216491041011214,1.26679932737549,0,3.19714863213368,1.55362730188303,0.148442139064825,0.173485326766136,0,0.230615497256059,0.452167921657868,0.470354828542819,0.125666591329675,0.247194967734374,0.86759614151947,0,0.323533699894818,0.220841518460394,0.969750506270444,0,1.17112318804619,2.09446706813455,0,0.479260498023681,0,0.254140454146129,0.748953197024114,0.457500602818626,0.376963056338593,1.91206752211504,1.27857728665165,0.20778804455956,0.324482526135515,0.305518091550949,0.746441823660558,0.758168275301024,0.210441855886474,0.390361328888111,0,0.180062129805349,0.753524089178575,0.476255494059295,0.384341160854549,0.281105173679186,1.29351685369508,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,1.74126083261083,0.411564272815887,0.398068533636986,0,0,0.284163499395593,0.828503090142008,0.703578179943289,0.540186184383045,0.946978942340841,0.393528463494808,0.617068451549513,0.697601834251224,0.268273401399619,0.350296027101508,0.822799249567402,1.14917224855367,0.810688095458557,0.877199924551994,0.878200461164203,0.134206418760372,1.05144974282064,0.308713837137853,0.660837565967596,1.32225283331772,0,0.464473343720877,0,0,0.667134131534611,0,0.949058123089023,0.658795818896044,1.00534083520108,0.198956472041151,0.19496408711912,1.79763881730844,0.864552199498777,0.796565093017469,0,0.456994050438915,0,0.203651327845314,1.16371492300575,0.140271639780637,0.252946148497029,0.147610147979602,0.470996183524124,0.493588655687202,0,0,0.393117990226406,0.449724224769707,0,0,0,0.575392274901621,0.324270453550071,0.549122826376163,1.43768206527355,0,0.312037673114561,0,0.538192240565737,0.482443521363367,0.184753190166605,0.189491411770485,0,0,0.704070744865506,0.167506257441816,0.952174563544055,0.390267295715598,0.945810864637146,1.10732344824387,0.797273843287435,1.3109065177259,0.518054945597687,0.578596234326046,1.50791283939272,0.54390568381871,0.491764273019036,0,0.481651769963376,0.35163505977661,0,0.252470927204373,1.89304931649754,3.12350995437311,2.80050417052639,2.62865677747807,2.45078541490634,0.849229592366497,2.83367491172426,4.09158201075837,3.55759000151871,1.92792789853084,0.141940085208269,0.35613120733451,0.162886959353576,1.48473110675282,1.32745138339963,0.242780636154981,0.906970670894253,0.188605079755898,0,0,0.516856586336442,1.09060118843252,1.78248689192361,1.58018378967908,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0,0,0.356737635204141,0.493647061806363,0,0.23467170806371,0.42366414172764,0,1.15420377059036,0.484393280087717,0.482503399425247,0.59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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=279 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:13807669..13807675,+ | |||
|description=CAGE_peak_at_chr10:13807669..13807675,+ | |||
|id=chr10:13807669..13807675,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.94e-08,8;CL:0000107,1.07e-07,9;CL:0000791,4.28e-07,9;CL:0000789,4.28e-07,9;CL:0002420,4.28e-07,9;CL:0002419,4.28e-07,9;CL:0000790,4.28e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!2.77e-07!10;UBERON:0000411!2.77e-07!10;UBERON:0001950!2.77e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.25e-11,10;UBERON:0000411,5.25e-11,10;UBERON:0001950,5.25e-11,10;UBERON:0003408,1.48e-08,24;UBERON:0002370,4.34e-08,23;UBERON:0000974,4.34e-08,23;UBERON:0004807,4.34e-08,23;UBERON:0005058,4.34e-08,23;UBERON:0003351,4.34e-08,23;UBERON:0009113,4.34e-08,23;UBERON:0003295,4.34e-08,23;UBERON:0009722,4.34e-08,23;UBERON:0005562,4.34e-08,23;UBERON:0007690,4.34e-08,23;UBERON:0002410,1.07e-07,9;UBERON:0006562,1.50e-07,24;UBERON:0001557,1.50e-07,24;UBERON:0001042,1.50e-07,24;UBERON:0008814,1.50e-07,24;UBERON:0009145,1.50e-07,24;UBERON:0000072,4.75e-07,27;UBERON:0000956,8.07e-07,21;UBERON:0001869,8.07e-07,21;UBERON:0000203,8.07e-07,21 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0.909998478779072,0.60492842261366,0,0.839396359559449,1.16806320297763,8.78038599402719,1.83025338797167,14.9801296846076,1.54096171402954,11.0883301003518,1.19840510951844,5.76974655965383,0,1.01237633694913,0,0.788655413395594,2.33094537129756,1.69755860719212,6.4632900514813,0,0.261199789138935,1.43993180514066,3.21172993494038,1.14846392823004,0,0.215471232685889,0.760093677825496,1.00812051903972,0.886922042621219,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,5.5394599909254,2.83855407414641,4.22157529971868,0,0,0,0,0,0,2.01339127269284,1.45072428402269,0.672187598284928,0.514518872071894,1.14613375975503,0,0,0,0,0,0.889294796111139,0,0,0,0,0,1.03689612308478,1.08004750665353,0.420649922702764,0.571301968807607,0.441737081903227,0.122490799214954,0,0.919218786610021,0,0.638436690425939,1.22885226604995,0,0.182975287204819,0.52091337055676,0.279182999001381,1.12552522006336,0.916789486660861,1.17851434189467,2.13557521198654,0.186399445825301,0.37863096666592,0.151143120213571,0.289864488701678,0,0,1.61910957491345,0,0,2.66844398250329,0.170430322578058,0.259786004602869,0,0.422530259330042,2.56652954828636,0,0,0.216491041011214,1.26679932737549,0,3.19714863213368,1.55362730188303,0.148442139064825,0.173485326766136,0,0.230615497256059,0.452167921657868,0.470354828542819,0.125666591329675,0.247194967734374,0.86759614151947,0,0.323533699894818,0.220841518460394,0.969750506270444,0,1.17112318804619,2.09446706813455,0,0.479260498023681,0,0.254140454146129,0.748953197024114,0.457500602818626,0.376963056338593,1.91206752211504,1.27857728665165,0.20778804455956,0.324482526135515,0.305518091550949,0.746441823660558,0.758168275301024,0.210441855886474,0.390361328888111,0,0.180062129805349,0.753524089178575,0.476255494059295,0.384341160854549,0.281105173679186,1.29351685369508,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,1.74126083261083,0.411564272815887,0.398068533636986,0,0,0.284163499395593,0.828503090142008,0.703578179943289,0.540186184383045,0.946978942340841,0.393528463494808,0.617068451549513,0.697601834251224,0.268273401399619,0.350296027101508,0.822799249567402,1.14917224855367,0.810688095458557,0.877199924551994,0.878200461164203,0.134206418760372,1.05144974282064,0.308713837137853,0.660837565967596,1.32225283331772,0,0.464473343720877,0,0,0.667134131534611,0,0.949058123089023,0.658795818896044,1.00534083520108,0.198956472041151,0.19496408711912,1.79763881730844,0.864552199498777,0.796565093017469,0,0.456994050438915,0,0.203651327845314,1.16371492300575,0.140271639780637,0.252946148497029,0.147610147979602,0.470996183524124,0.493588655687202,0,0,0.393117990226406,0.449724224769707,0,0,0,0.575392274901621,0.324270453550071,0.549122826376163,1.43768206527355,0,0.312037673114561,0,0.538192240565737,0.482443521363367,0.184753190166605,0.189491411770485,0,0,0.704070744865506,0.167506257441816,0.952174563544055,0.390267295715598,0.945810864637146,1.10732344824387,0.797273843287435,1.3109065177259,0.518054945597687,0.578596234326046,1.50791283939272,0.54390568381871,0.491764273019036,0,0.481651769963376,0.35163505977661,0,0.252470927204373,1.89304931649754,3.12350995437311,2.80050417052639,2.62865677747807,2.45078541490634,0.849229592366497,2.83367491172426,4.09158201075837,3.55759000151871,1.92792789853084,0.141940085208269,0.35613120733451,0.162886959353576,1.48473110675282,1.32745138339963,0.242780636154981,0.906970670894253,0.188605079755898,0,0,0.516856586336442,1.09060118843252,1.78248689192361,1.58018378967908,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0,0,0.356737635204141,0.493647061806363,0,0.23467170806371,0.42366414172764,0,1.15420377059036,0.484393280087717,0.482503399425247,0.596861720015682,0.820704498725306,0.582961673259701,0.18542530201051,0.512612642393558,0,0.370389054739423,0.376736914009382,1.91371918809435,0.457556346413045,0.169978429993855,0.559805809294632,0.138199973804424,0.954670618015114,0.158167996790568,0.609958401380546,0.540026704109006,1.04544148007234,0.436725127492355,0.674321731924103,0.41326727862668,0.785267825952089,0.259229946583586,1.24267862617385,0.56369293868419,0.149516546043979,0,0,0,0,0.117357238645754,0.39061315453185,0.524296722128554,0.241584120826006,0.864090018773596,2.21207784439725,0.202725215290164,0.102710957164827,0.25984164595559,0.537080087002444,0.596044064343795,1.68273629327956,1.77227432609493,2.22126189885925,1.06689529317,1.81487133246313,2.43644701849381,2.21287235772758,1.8700304349051,0.226730383615211,1.10992976687032,0,0.167884616364078,0.772758376128762,1.31377732815827,0.36630324853453,0.214368379079066,0,4.51801474093653,4.14292712856459,3.43737308063638,2.40594455281163,1.37016503954128,3.0215755895588,4.05013500139084,2.2516060161211,6.34399372577886,3.62432218226274,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0,0.44449345560323,0.618105171716683,1.28367683836726,1.01078884705519,0.5069585997804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| |||
|short_description=p@chr10:13807669..13807675,+ | |||
}} |
Latest revision as of 04:07, 4 August 2015
Short description: | p@chr10:13807669..13807675, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:13807669..13807675, + |
Coexpression cluster: | MCL_coexpression_mm9:279 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.94e-08 | 8 |
autonomic neuron | 1.07e-07 | 9 |
mature alpha-beta T cell | 4.28e-07 | 9 |
alpha-beta T cell | 4.28e-07 | 9 |
immature T cell | 4.28e-07 | 9 |
mature T cell | 4.28e-07 | 9 |
immature alpha-beta T cell | 4.28e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.25e-11 | 10 |
visual cortex | 5.25e-11 | 10 |
neocortex | 5.25e-11 | 10 |
gland of gut | 1.48e-08 | 24 |
thymus | 4.34e-08 | 23 |
neck | 4.34e-08 | 23 |
respiratory system epithelium | 4.34e-08 | 23 |
hemolymphoid system gland | 4.34e-08 | 23 |
pharyngeal epithelium | 4.34e-08 | 23 |
thymic region | 4.34e-08 | 23 |
pharyngeal gland | 4.34e-08 | 23 |
entire pharyngeal arch endoderm | 4.34e-08 | 23 |
thymus primordium | 4.34e-08 | 23 |
early pharyngeal endoderm | 4.34e-08 | 23 |
autonomic nervous system | 1.07e-07 | 9 |
pharynx | 1.50e-07 | 24 |
upper respiratory tract | 1.50e-07 | 24 |
chordate pharynx | 1.50e-07 | 24 |
pharyngeal arch system | 1.50e-07 | 24 |
pharyngeal region of foregut | 1.50e-07 | 24 |
segment of respiratory tract | 4.75e-07 | 27 |
cerebral cortex | 8.07e-07 | 21 |
cerebral hemisphere | 8.07e-07 | 21 |
pallium | 8.07e-07 | 21 |