FFCP PHASE1:Mm9::chr10:14110901..14110902,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1883|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:14110901..14110902,+|id=chr10:14110901..14110902,+|ontology_enrichment_celltype=CL:0000055!4.73e-30!50;CL:0002319!4.90e-30!43;CL:0000221!3.12e-29!44;CL:0000133!3.12e-29!44;CL:0000393!2.13e-27!39;CL:0000211!2.13e-27!39;CL:0000540!5.03e-27!33;CL:0000047!5.03e-27!33;CL:0000031!5.03e-27!33;CL:0000404!5.03e-27!33;CL:0000117!3.68e-25!23;CL:0000337!3.68e-25!23;CL:0002321!1.01e-23!70;CL:0000220!1.01e-23!70;CL:0000548!2.61e-17!115;CL:0000004!2.61e-17!115;CL:0000255!2.61e-17!115;CL:0002371!1.05e-16!118;CL:0000144!3.94e-16!121;CL:0000012!3.94e-16!121;CL:0000723!2.28e-15!91;CL:0000048!2.28e-15!91;CL:0000034!2.31e-15!97;CL:0002608!1.19e-08!3;CL:0002609!1.53e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,1.08e-12,6;CL:0000117,1.12e-07,23;CL:0000337,1.12e-07,23;CL:0000120,3.18e-07,3;CL:0002608,3.64e-07,3;CL:0002319,3.65e-07,43;CL:0000221,5.16e-07,44;CL:0000133,5.16e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.79e-19!73;UBERON:0005743!5.79e-19!73;UBERON:0000073!2.64e-18!75;UBERON:0001016!2.64e-18!75;UBERON:0002020!6.25e-14!34;UBERON:0004121!6.01e-12!102;UBERON:0000924!6.01e-12!102;UBERON:0006601!6.01e-12!102;UBERON:0001049!2.37e-09!52;UBERON:0005068!2.37e-09!52;UBERON:0006241!2.37e-09!52;UBERON:0007135!2.37e-09!52;UBERON:0002791!6.70e-09!29;UBERON:0003528!6.70e-09!29;UBERON:0001893!6.70e-09!29;UBERON:0001948!4.88e-08!5;UBERON:0002315!4.88e-08!5;UBERON:0002346!6.46e-08!71;UBERON:0003075!6.46e-08!71;UBERON:0007284!6.46e-08!71;UBERON:0002616!1.55e-07!49;UBERON:0000955!2.51e-07!50;UBERON:0006238!2.51e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.06e-08,21;UBERON:0001869,3.06e-08,21;UBERON:0000203,3.06e-08,21|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0,0.202316460859598,0,4.43681982454325,0,0,0,0,0,0.898800331555214,0,0,1.89008313664367,0,0.285650984403804,0.220868540951614,0.61245399607477,0.0958454710182364,3.67687514644008,0,0.383062014255563,0.153606533256243,0.527545150920775,0.457438218012048,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0.315508219416257,0,0.430846795465598,0,0.445597348164788,0.849229592366497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35004500046361,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:14110901..14110902,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1883 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:14110901..14110902,+ | |||
|description=CAGE_peak_at_chr10:14110901..14110902,+ | |||
|id=chr10:14110901..14110902,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.73e-30!50;CL:0002319!4.90e-30!43;CL:0000221!3.12e-29!44;CL:0000133!3.12e-29!44;CL:0000393!2.13e-27!39;CL:0000211!2.13e-27!39;CL:0000540!5.03e-27!33;CL:0000047!5.03e-27!33;CL:0000031!5.03e-27!33;CL:0000404!5.03e-27!33;CL:0000117!3.68e-25!23;CL:0000337!3.68e-25!23;CL:0002321!1.01e-23!70;CL:0000220!1.01e-23!70;CL:0000548!2.61e-17!115;CL:0000004!2.61e-17!115;CL:0000255!2.61e-17!115;CL:0002371!1.05e-16!118;CL:0000144!3.94e-16!121;CL:0000012!3.94e-16!121;CL:0000723!2.28e-15!91;CL:0000048!2.28e-15!91;CL:0000034!2.31e-15!97;CL:0002608!1.19e-08!3;CL:0002609!1.53e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.08e-12,6;CL:0000117,1.12e-07,23;CL:0000337,1.12e-07,23;CL:0000120,3.18e-07,3;CL:0002608,3.64e-07,3;CL:0002319,3.65e-07,43;CL:0000221,5.16e-07,44;CL:0000133,5.16e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.79e-19!73;UBERON:0005743!5.79e-19!73;UBERON:0000073!2.64e-18!75;UBERON:0001016!2.64e-18!75;UBERON:0002020!6.25e-14!34;UBERON:0004121!6.01e-12!102;UBERON:0000924!6.01e-12!102;UBERON:0006601!6.01e-12!102;UBERON:0001049!2.37e-09!52;UBERON:0005068!2.37e-09!52;UBERON:0006241!2.37e-09!52;UBERON:0007135!2.37e-09!52;UBERON:0002791!6.70e-09!29;UBERON:0003528!6.70e-09!29;UBERON:0001893!6.70e-09!29;UBERON:0001948!4.88e-08!5;UBERON:0002315!4.88e-08!5;UBERON:0002346!6.46e-08!71;UBERON:0003075!6.46e-08!71;UBERON:0007284!6.46e-08!71;UBERON:0002616!1.55e-07!49;UBERON:0000955!2.51e-07!50;UBERON:0006238!2.51e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.06e-08,21;UBERON:0001869,3.06e-08,21;UBERON:0000203,3.06e-08,21 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0,0.202316460859598,0,4.43681982454325,0,0,0,0,0,0.898800331555214,0,0,1.89008313664367,0,0.285650984403804,0.220868540951614,0.61245399607477,0.0958454710182364,3.67687514644008,0,0.383062014255563,0.153606533256243,0.527545150920775,0.457438218012048,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0.315508219416257,0,0.430846795465598,0,0.445597348164788,0.849229592366497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35004500046361,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:14110901..14110902,+ | |||
}} |
Latest revision as of 04:09, 4 August 2015
Short description: | p@chr10:14110901..14110902, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:14110901..14110902, + |
Coexpression cluster: | MCL_coexpression_mm9:1883 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.08e-12 | 6 |
CNS neuron (sensu Vertebrata) | 1.12e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-07 | 23 |
granule cell | 3.18e-07 | 3 |
hippocampal neuron | 3.64e-07 | 3 |
neural cell | 3.65e-07 | 43 |
ectodermal cell | 5.16e-07 | 44 |
neurectodermal cell | 5.16e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 3.06e-08 | 21 |
cerebral hemisphere | 3.06e-08 | 21 |
pallium | 3.06e-08 | 21 |