FFCP PHASE1:Mm9::chr5:20456748..20456768,+: Difference between revisions
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{{FFCP|EntrezGene=320770|HGNC=|UniProt=|association_with_transcript=-38bp_to_NR_030699,uc008wog.2_5end|description=CAGE_peak_1_at_A630072M18Rik_5end|id=chr5:20456748..20456768,+|ontology_enrichment_celltype=CL:0000221!6.63e-08!44;CL:0000133!6.63e-08!44;CL:0002319!9.08e-08!43;CL:0000055!1.09e-07!50;CL:0000540!2.75e-07!33;CL:0000047!2.75e-07!33;CL:0000031!2.75e-07!33;CL:0000404!2.75e-07!33;CL:0000393!7.36e-07!39;CL:0000211!7.36e-07!39|ontology_enrichment_celltype_v019_2=CL:0000107,5.89e-13,9;CL:0000034,4.82e-10,97;CL:0000540,5.93e-10,33;CL:0000047,5.93e-10,33;CL:0000031,5.93e-10,33;CL:0000404,5.93e-10,33;CL:0002319,7.34e-10,43;CL:0000723,7.68e-10,91;CL:0000048,7.68e-10,91;CL:0000221,1.67e-09,44;CL:0000133,1.67e-09,44;CL:0000393,7.54e-09,39;CL:0000211,7.54e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.54e-11!75;UBERON:0001016!5.54e-11!75;UBERON:0001017!6.32e-11!73;UBERON:0005743!6.32e-11!73;UBERON:0004121!3.40e-09!102;UBERON:0000924!3.40e-09!102;UBERON:0006601!3.40e-09!102;UBERON:0002346!8.49e-08!71;UBERON:0003075!8.49e-08!71;UBERON:0007284!8.49e-08!71|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.89e-13,9;UBERON:0000010,3.48e-10,11;UBERON:0001017,3.51e-10,73;UBERON:0001016,1.08e-09,75;UBERON:0001948,2.04e-07,5;UBERON:0002315,2.04e-07,5;UBERON:0002020,8.67e-07,34|phase1_expression=1.12104192973356,0.348975407639361,0,0,0,0.16787927191189,0,0.645616617207881,12.5301962714983,5.61754863172784,0,0.398860794976682,0.513602189793617,0.174840804837995,0,0,0.699561878128147,0,0,0,0.425216450755349,0.0992909512008853,0,0.319984845586813,0,0,0,0.215471232685889,0,0,0.443461021310609,0.635030673459631,1.23012957516914,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,3.12956537739216,0.218025156380447,1.5378032791413,0.58328969722285,0.419959264876088,0,1.34226084846189,2.17608642603403,1.00828139742739,2.05807548828758,0.573066879877513,0.515672092277442,0.404632921719196,0.528990979272033,1.90149421051854,1.35537812827653,2.66788438833342,0,3.9554654502679,0.7104801149461,0.898800331555214,3.07374644257244,0.311068836925433,0.675029691658453,1.05162480675691,2.28520787523043,1.54607978666129,0.122490799214954,0.383381884072945,0.919218786610021,0,0.510749352340751,0.614426133024974,0.923204014111357,0.457438218012048,0.52091337055676,0.279182999001381,1.12552522006336,0.61119299110724,3.24091444021034,1.13897344639282,1.3047961207771,0.530083353332288,0.604572480854284,2.02905142091174,0.860423876981386,0,0,0,0.448026887097336,0,0.681721290312231,1.03914401841148,0.70667914902068,0.704217098883403,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0.258937883647172,0.890652834388949,1.04091196059682,0.304465478312141,0.461230994512117,0.60289056221049,0.823120949949934,0.376999773989026,0.247194967734374,0.86759614151947,0,0.485300549842228,0.441683036920787,0,0,0.878342391034642,0.628340120440365,0.255457055208591,0.718890747035522,1.19980546198682,0.381210681219194,0.449371918214468,0,0.251308704225729,0.347648640384553,1.27857728665165,0.62336413367868,0.486723789203273,0.407357455401265,0.870848794270651,0.758168275301024,0,0.650602214813519,0.919608417733892,0.360124259610698,0.60281927134286,0.476255494059295,0.512454881139399,0.374806898238915,0.776110112217047,0.646703978798527,0.189106080167819,0.703804496655795,0.876782929710299,0.834141747676794,0.348252166522167,0.411564272815887,0.199034266818493,0,0.51469581422943,0.284163499395593,0.828503090142008,0.234526059981096,1.2604344302271,1.18372367792605,0.983821158737019,1.3884040159864,1.62773761325285,1.87791380979733,0.700592054203017,0.822799249567402,0.820837320395476,0.648550476366846,0.730999937126662,1.09775057645525,1.07365135008297,0.630869845692382,1.23485534855141,0,0,1.91959425481711,0.696710015581316,0.77320476793256,0.605050573870028,0.22237804384487,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.58489226135736,0,0.216138049874694,0,0.948339504765408,0.799739588268102,1.1270773567308,0.407302655690628,0.775809948670503,0.420814919341911,0.69560190836683,0.147610147979602,0.470996183524124,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0.50925170356284,0,0,0,0,0,0.624075346229121,0,0.179397413521912,0,0.184753190166605,0.568474235311454,0.651859905768103,0.169745085775188,0.704070744865506,1.00503754465089,0.952174563544055,1.56106918286239,0.788175720530955,0.44292937929755,0.797273843287435,0.491589944147214,0.518054945597687,0.433947175744535,1.50791283939272,0,0,0.275936746304732,0.321101179975584,0.35163505977661,0,0,2.83957397474631,1.95219372148319,2.80050417052639,3.34556317133573,1.11399337041197,1.13230612315533,3.23848561339915,3.21481443702443,1.97643888973262,0.963963949265421,0.141940085208269,0.178065603667255,0.651547837414304,0.494910368917606,0,0.728341908464944,1.209294227859,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,1.069492135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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320770 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-38bp_to_NR_030699,uc008wog.2_5end | |||
|cluster_id=chr5:20456748..20456768,+ | |||
|description=CAGE_peak_1_at_A630072M18Rik_5end | |||
|id=chr5:20456748..20456768,+ | |||
|ontology_enrichment_celltype=CL:0000221!6.63e-08!44;CL:0000133!6.63e-08!44;CL:0002319!9.08e-08!43;CL:0000055!1.09e-07!50;CL:0000540!2.75e-07!33;CL:0000047!2.75e-07!33;CL:0000031!2.75e-07!33;CL:0000404!2.75e-07!33;CL:0000393!7.36e-07!39;CL:0000211!7.36e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.89e-13,9;CL:0000034,4.82e-10,97;CL:0000540,5.93e-10,33;CL:0000047,5.93e-10,33;CL:0000031,5.93e-10,33;CL:0000404,5.93e-10,33;CL:0002319,7.34e-10,43;CL:0000723,7.68e-10,91;CL:0000048,7.68e-10,91;CL:0000221,1.67e-09,44;CL:0000133,1.67e-09,44;CL:0000393,7.54e-09,39;CL:0000211,7.54e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.54e-11!75;UBERON:0001016!5.54e-11!75;UBERON:0001017!6.32e-11!73;UBERON:0005743!6.32e-11!73;UBERON:0004121!3.40e-09!102;UBERON:0000924!3.40e-09!102;UBERON:0006601!3.40e-09!102;UBERON:0002346!8.49e-08!71;UBERON:0003075!8.49e-08!71;UBERON:0007284!8.49e-08!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.89e-13,9;UBERON:0000010,3.48e-10,11;UBERON:0001017,3.51e-10,73;UBERON:0001016,1.08e-09,75;UBERON:0001948,2.04e-07,5;UBERON:0002315,2.04e-07,5;UBERON:0002020,8.67e-07,34 | |||
|phase1_expression=1.12104192973356,0.348975407639361,0,0,0,0.16787927191189,0,0.645616617207881,12.5301962714983,5.61754863172784,0,0.398860794976682,0.513602189793617,0.174840804837995,0,0,0.699561878128147,0,0,0,0.425216450755349,0.0992909512008853,0,0.319984845586813,0,0,0,0.215471232685889,0,0,0.443461021310609,0.635030673459631,1.23012957516914,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,3.12956537739216,0.218025156380447,1.5378032791413,0.58328969722285,0.419959264876088,0,1.34226084846189,2.17608642603403,1.00828139742739,2.05807548828758,0.573066879877513,0.515672092277442,0.404632921719196,0.528990979272033,1.90149421051854,1.35537812827653,2.66788438833342,0,3.9554654502679,0.7104801149461,0.898800331555214,3.07374644257244,0.311068836925433,0.675029691658453,1.05162480675691,2.28520787523043,1.54607978666129,0.122490799214954,0.383381884072945,0.919218786610021,0,0.510749352340751,0.614426133024974,0.923204014111357,0.457438218012048,0.52091337055676,0.279182999001381,1.12552522006336,0.61119299110724,3.24091444021034,1.13897344639282,1.3047961207771,0.530083353332288,0.604572480854284,2.02905142091174,0.860423876981386,0,0,0,0.448026887097336,0,0.681721290312231,1.03914401841148,0.70667914902068,0.704217098883403,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0.258937883647172,0.890652834388949,1.04091196059682,0.304465478312141,0.461230994512117,0.60289056221049,0.823120949949934,0.376999773989026,0.247194967734374,0.86759614151947,0,0.485300549842228,0.441683036920787,0,0,0.878342391034642,0.628340120440365,0.255457055208591,0.718890747035522,1.19980546198682,0.381210681219194,0.449371918214468,0,0.251308704225729,0.347648640384553,1.27857728665165,0.62336413367868,0.486723789203273,0.407357455401265,0.870848794270651,0.758168275301024,0,0.650602214813519,0.919608417733892,0.360124259610698,0.60281927134286,0.476255494059295,0.512454881139399,0.374806898238915,0.776110112217047,0.646703978798527,0.189106080167819,0.703804496655795,0.876782929710299,0.834141747676794,0.348252166522167,0.411564272815887,0.199034266818493,0,0.51469581422943,0.284163499395593,0.828503090142008,0.234526059981096,1.2604344302271,1.18372367792605,0.983821158737019,1.3884040159864,1.62773761325285,1.87791380979733,0.700592054203017,0.822799249567402,0.820837320395476,0.648550476366846,0.730999937126662,1.09775057645525,1.07365135008297,0.630869845692382,1.23485534855141,0,0,1.91959425481711,0.696710015581316,0.77320476793256,0.605050573870028,0.22237804384487,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.58489226135736,0,0.216138049874694,0,0.948339504765408,0.799739588268102,1.1270773567308,0.407302655690628,0.775809948670503,0.420814919341911,0.69560190836683,0.147610147979602,0.470996183524124,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0.50925170356284,0,0,0,0,0,0.624075346229121,0,0.179397413521912,0,0.184753190166605,0.568474235311454,0.651859905768103,0.169745085775188,0.704070744865506,1.00503754465089,0.952174563544055,1.56106918286239,0.788175720530955,0.44292937929755,0.797273843287435,0.491589944147214,0.518054945597687,0.433947175744535,1.50791283939272,0,0,0.275936746304732,0.321101179975584,0.35163505977661,0,0,2.83957397474631,1.95219372148319,2.80050417052639,3.34556317133573,1.11399337041197,1.13230612315533,3.23848561339915,3.21481443702443,1.97643888973262,0.963963949265421,0.141940085208269,0.178065603667255,0.651547837414304,0.494910368917606,0,0.728341908464944,1.209294227859,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,1.06949213515416,0.316036757935816,1.05418608574999,0,0,0.720244376125241,0.388076051348264,0.857348140126369,0.354680467284547,0.891844088010353,1.15184314421485,0.304464949114599,0.23467170806371,0,0,0,0.484393280087717,0.180938774784468,0.596861720015682,0.328281799490123,0.582961673259701,0.927126510052548,0.341741761595705,0.206386867963223,0.185194527369712,0.376736914009382,0.27338845544205,0,0.339956859987711,0.139951452323658,0.414599921413271,0.954670618015114,2.21435195506795,0.609958401380546,0.648032044930808,0.418176592028937,0.218362563746178,0.134864346384821,0.41326727862668,0.26175594198403,0.129614973291793,0.621339313086926,0,1.64468200648377,1.15820943319968,0.194451188344048,1.29159823477731,0.168956125490778,0.704143431874524,0.781226309063701,0.524296722128554,0.483168241652012,0.288030006257865,0,0.810900861160657,0.718976700153791,0.389762468933385,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0.192423683280659,0,0.226730383615211,0,1.07656627931371,1.00730769818447,0.772758376128762,0.375364950902364,0.36630324853453,0,0,1.6942555278512,3.22227665555024,1.71868654031819,1.89038500578056,0.685082519770642,1.5107877947794,2.02506750069542,0.900642406448441,0.906284817968409,1.03552062350364,1.03787347584177,0.399024873401031,0.341467211508268,0.972426868273176,0.838452650511929,0.183843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| |||
|short_description=p1@A630072M18Rik | |||
}} |
Revision as of 04:10, 4 August 2015
Short description: | p1@A630072M18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_A630072M18Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_NR_030699, uc008wog.2_5end |
EntrezGene: | 320770 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.89e-13 | 9 |
stem cell | 4.82e-10 | 97 |
neuron | 5.93e-10 | 33 |
neuronal stem cell | 5.93e-10 | 33 |
neuroblast | 5.93e-10 | 33 |
electrically signaling cell | 5.93e-10 | 33 |
neural cell | 7.34e-10 | 43 |
somatic stem cell | 7.68e-10 | 91 |
multi fate stem cell | 7.68e-10 | 91 |
ectodermal cell | 1.67e-09 | 44 |
neurectodermal cell | 1.67e-09 | 44 |
electrically responsive cell | 7.54e-09 | 39 |
electrically active cell | 7.54e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 5.89e-13 | 9 |
peripheral nervous system | 3.48e-10 | 11 |
central nervous system | 3.51e-10 | 73 |
nervous system | 1.08e-09 | 75 |
regional part of spinal cord | 2.04e-07 | 5 |
gray matter of spinal cord | 2.04e-07 | 5 |
gray matter | 8.67e-07 | 34 |