FFCP PHASE1:Mm9::chr3:92306475..92306476,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=502|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:92306475..92306476,+|id=chr3:92306475..92306476,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,8.02e-16,3;CL:0002006,8.02e-16,3;CL:0002024,8.02e-16,3;CL:0000553,1.29e-08,6;CL:0000556,1.29e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.52e-08,6;UBERON:0004457,1.52e-08,6;UBERON:0000042,1.52e-08,6;UBERON:0004854,1.52e-08,6;UBERON:0009034,1.52e-08,6;UBERON:0002095,1.52e-08,6;UBERON:0004782,1.52e-08,6;UBERON:0003281,1.52e-08,6;UBERON:0009664,1.52e-08,6;UBERON:0002296,1.52e-08,6;UBERON:0005602,1.52e-08,6;UBERON:0001179,1.52e-08,6;UBERON:0006293,1.52e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,5.66930748691513,0,0.315462165358238,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.243206428637567,0,0.878200461164203,0.671032093801859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.50925170356284,0.575392274901621,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0.167506257441816,0,0.585400943573396,0.157635144106191,0,0,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.565105371014073,0,1.83022538565218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:92306475..92306476,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=502 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:92306475..92306476,+ | |||
|description=CAGE_peak_at_chr3:92306475..92306476,+ | |||
|id=chr3:92306475..92306476,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,8.02e-16,3;CL:0002006,8.02e-16,3;CL:0002024,8.02e-16,3;CL:0000553,1.29e-08,6;CL:0000556,1.29e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.52e-08,6;UBERON:0004457,1.52e-08,6;UBERON:0000042,1.52e-08,6;UBERON:0004854,1.52e-08,6;UBERON:0009034,1.52e-08,6;UBERON:0002095,1.52e-08,6;UBERON:0004782,1.52e-08,6;UBERON:0003281,1.52e-08,6;UBERON:0009664,1.52e-08,6;UBERON:0002296,1.52e-08,6;UBERON:0005602,1.52e-08,6;UBERON:0001179,1.52e-08,6;UBERON:0006293,1.52e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,5.66930748691513,0,0.315462165358238,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.243206428637567,0,0.878200461164203,0.671032093801859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.50925170356284,0.575392274901621,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0.167506257441816,0,0.585400943573396,0.157635144106191,0,0,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.565105371014073,0,1.83022538565218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:92306475..92306476,+ | |||
}} |
Latest revision as of 06:40, 4 August 2015
Short description: | p@chr3:92306475..92306476, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:92306475..92306476, + |
Coexpression cluster: | MCL_coexpression_mm9:502 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 8.02e-16 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 8.02e-16 | 3 |
Kit-positive megakaryocyte progenitor cell | 8.02e-16 | 3 |
megakaryocyte progenitor cell | 1.29e-08 | 6 |
megakaryocyte | 1.29e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.52e-08 | 6 |
cavity lining | 1.52e-08 | 6 |
serous membrane | 1.52e-08 | 6 |
gastrointestinal system mesentery | 1.52e-08 | 6 |
stomach region | 1.52e-08 | 6 |
mesentery | 1.52e-08 | 6 |
gastrointestinal system serosa | 1.52e-08 | 6 |
mesentery of stomach | 1.52e-08 | 6 |
gut mesentery | 1.52e-08 | 6 |
dorsal mesentery | 1.52e-08 | 6 |
dorsal mesogastrium | 1.52e-08 | 6 |
peritoneal cavity | 1.52e-08 | 6 |
spleen primordium | 1.52e-08 | 6 |