FFCP PHASE1:Mm9::chr2:155102816..155102842,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=891|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:155102816..155102842,+|id=chr2:155102816..155102842,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.36e-16!102;UBERON:0000924!2.36e-16!102;UBERON:0006601!2.36e-16!102;UBERON:0001017!9.06e-11!73;UBERON:0005743!9.06e-11!73;UBERON:0002346!1.76e-10!71;UBERON:0003075!1.76e-10!71;UBERON:0007284!1.76e-10!71;UBERON:0000073!1.79e-10!75;UBERON:0001016!1.79e-10!75;UBERON:0001049!1.12e-08!52;UBERON:0005068!1.12e-08!52;UBERON:0006241!1.12e-08!52;UBERON:0007135!1.12e-08!52;UBERON:0000955!6.85e-08!50;UBERON:0006238!6.85e-08!50;UBERON:0002616!1.37e-07!49;UBERON:0000033!1.46e-07!63;UBERON:0004111!3.25e-07!122;UBERON:0002020!4.14e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.80e-13,92;UBERON:0000073,1.17e-09,54;UBERON:0004121,4.32e-09,95;UBERON:0000924,4.32e-09,95;UBERON:0006601,4.32e-09,95;UBERON:0001017,7.82e-09,73;UBERON:0001016,2.60e-08,75;UBERON:0001049,2.97e-08,52;UBERON:0005068,2.97e-08,52;UBERON:0006241,2.97e-08,52;UBERON:0007135,2.97e-08,52;UBERON:0002020,5.07e-08,34;UBERON:0004111,6.69e-08,122;UBERON:0003064,1.11e-07,14;UBERON:0010371,1.77e-07,73;UBERON:0002369,1.80e-07,7;UBERON:0006858,1.80e-07,7|phase1_expression=0.640595388419176,0,0.454999239389536,0,0,0.33575854382378,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,1.5626706890476,0,0,0,1.94204141212461,0.251793635951155,0.101376931219515,0.917733760808408,1.56478268869608,0.872100625521786,0.878744730937887,0.388859798148567,0.419959264876088,1.43752564364972,0.167782606057736,0,0,1.02903774414379,0.286533439938757,2.06268836910977,2.02316460859598,1.05798195854407,0.633831403506179,1.0165335962074,1.77858959222228,0,0,0.7104801149461,1.79760066311043,0.768436610643109,0,0.675029691658453,0,4.57041575046086,2.87129103237098,0.734944795289724,0.287536413054709,0,3.30347642998166,3.95830748064082,5.9906547969935,0.923204014111357,1.09785172322892,1.04182674111352,8.37548997004143,5.06486349028512,5.34793867218835,3.24091444021034,3.27454865837937,2.42319279572891,0.075726193333184,0.604572480854284,0.579728977403356,0,0.679971333707751,0,0,0,3.65155492342555,0.511290967734173,0.259786004602869,1.41335829804136,1.12674735821344,0,0,0,3.24736561516821,2.02687892380079,4.04419556011827,1.59857431606684,0,1.92974780784272,1.04091196059682,9.13396434936424,11.992005857315,11.9070886036572,5.52666923537813,4.64966387919799,0.988779870937496,1.15679485535929,0,1.94120219936891,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0.255457055208591,0,0,0,1.49790639404823,2.74500361691176,0.376963056338593,1.39059456153821,1.79000820131231,2.0778804455956,1.29793010454206,0.305518091550949,0.373220911830279,1.0108910337347,0.631325567659422,0.130120442962704,0,0.180062129805349,0.150704817835715,0.476255494059295,0.2562274405697,0.468508622798644,0.776110112217047,0,0.378212160335639,0.175951124163949,0.657587197282725,0,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0,0.703578179943289,0,0.473489471170421,0.983821158737019,0.308534225774757,0.930135779001631,2.68273401399619,2.10177616260905,2.63295759861569,5.58169377868924,5.10733500138891,7.01759939641595,6.58650345873152,6.57611451925822,1.05144974282064,0.205809224758569,0.330418782983798,0,0.213288250535234,0,0,0,0,0.190225626112559,0.474529061544512,0.988193728344065,0.251335208800269,0.198956472041151,0,0,0,0.398282546508734,0.189667900953082,0.913988100877831,0,0,0,0.280543279561274,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0.358794827043824,0.482443521363367,1.66277871149944,0.37898282354097,0.162964976442026,0,0,0,1.42826184531608,0.390267295715598,0.630540576424764,0.221464689648775,0.318909537314974,2.45794972073607,1.72684981865896,2.74833211304872,0,0,1.47529281905711,0.827810238914197,3.21101179975584,2.69586879162067,0.819674726883377,3.7870639080656,0.631016438832513,1.17131623288992,0.430846795465598,0,0.668396022247182,0.566153061577665,0,0.292255857911312,0.395287777946524,1.60660658210904,2.2710413633323,0.178065603667255,0.162886959353576,0.329940245945071,2.65490276679926,0,0,0,0,0.614870295887855,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0,0.36012218806262,0.258717367565509,0.857348140126369,0.177340233642274,0.356737635204141,0.658196082408484,2.43571959291679,0.469343416127421,1.69465656691056,5.73373834942901,7.09010887648364,0.968786560175433,1.26657142349127,2.74556391207214,6.07321329056727,0.291480836629851,2.03967832211561,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0,0.432021363287205,0.209088296014469,1.31017538247707,0.944050424693745,0.330613822901344,1.04702376793612,0,11.1841076355647,0.56369293868419,0.149516546043979,0.496375471371293,0.972255941720238,0.904118764344118,0.168956125490778,0.469428954583016,0.13020438484395,0,0,0.288030006257865,0.632022241256357,0,0.308132871494482,0,0.179026695667481,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0.504130925684203,0.682205165178267,0.769694733122636,1.05189211963412,1.58711268530648,0.221985953374065,0.179427713218951,1.00730769818447,0.386379188064381,0.563047426353546,0.36630324853453,7.93163002592544,8.02515366456581,2.82375921308533,1.84130094602871,0.572895513439397,2.40594455281163,1.37016503954128,2.2661816921691,3.37511250115903,2.70192721934532,1.81256963593682,1.55328093525546,0,0,0.512200817262403,0.243106717068294,0.419226325255965,0.735374033800057,0.666740183404846,1.03017528619447,2.24643446714271,0.758091635291392,0.50695859978048,1.32038438970253,1.03005658216871,0.576226371643824,0.516919220600519,0.476293691283074,0.231768651889711,0.38581844092741,0,0.883193520806384,0.685738504770831,0.887379030796687,0,0.290692833264657,0.846984423737976,0.761531471025089,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,1.22769312950907,0.464810523557898,0.385813221962283,0.749431733813838,0.935726433781634,1.28922632428979,2.48674831689496,4.63241980150983,3.94175320554716|short_description=p@chr2:155102816..155102842,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=891 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:155102816..155102842,+ | |||
|description=CAGE_peak_at_chr2:155102816..155102842,+ | |||
|id=chr2:155102816..155102842,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.36e-16!102;UBERON:0000924!2.36e-16!102;UBERON:0006601!2.36e-16!102;UBERON:0001017!9.06e-11!73;UBERON:0005743!9.06e-11!73;UBERON:0002346!1.76e-10!71;UBERON:0003075!1.76e-10!71;UBERON:0007284!1.76e-10!71;UBERON:0000073!1.79e-10!75;UBERON:0001016!1.79e-10!75;UBERON:0001049!1.12e-08!52;UBERON:0005068!1.12e-08!52;UBERON:0006241!1.12e-08!52;UBERON:0007135!1.12e-08!52;UBERON:0000955!6.85e-08!50;UBERON:0006238!6.85e-08!50;UBERON:0002616!1.37e-07!49;UBERON:0000033!1.46e-07!63;UBERON:0004111!3.25e-07!122;UBERON:0002020!4.14e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.80e-13,92;UBERON:0000073,1.17e-09,54;UBERON:0004121,4.32e-09,95;UBERON:0000924,4.32e-09,95;UBERON:0006601,4.32e-09,95;UBERON:0001017,7.82e-09,73;UBERON:0001016,2.60e-08,75;UBERON:0001049,2.97e-08,52;UBERON:0005068,2.97e-08,52;UBERON:0006241,2.97e-08,52;UBERON:0007135,2.97e-08,52;UBERON:0002020,5.07e-08,34;UBERON:0004111,6.69e-08,122;UBERON:0003064,1.11e-07,14;UBERON:0010371,1.77e-07,73;UBERON:0002369,1.80e-07,7;UBERON:0006858,1.80e-07,7 | |||
|phase1_expression=0.640595388419176,0,0.454999239389536,0,0,0.33575854382378,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,1.5626706890476,0,0,0,1.94204141212461,0.251793635951155,0.101376931219515,0.917733760808408,1.56478268869608,0.872100625521786,0.878744730937887,0.388859798148567,0.419959264876088,1.43752564364972,0.167782606057736,0,0,1.02903774414379,0.286533439938757,2.06268836910977,2.02316460859598,1.05798195854407,0.633831403506179,1.0165335962074,1.77858959222228,0,0,0.7104801149461,1.79760066311043,0.768436610643109,0,0.675029691658453,0,4.57041575046086,2.87129103237098,0.734944795289724,0.287536413054709,0,3.30347642998166,3.95830748064082,5.9906547969935,0.923204014111357,1.09785172322892,1.04182674111352,8.37548997004143,5.06486349028512,5.34793867218835,3.24091444021034,3.27454865837937,2.42319279572891,0.075726193333184,0.604572480854284,0.579728977403356,0,0.679971333707751,0,0,0,3.65155492342555,0.511290967734173,0.259786004602869,1.41335829804136,1.12674735821344,0,0,0,3.24736561516821,2.02687892380079,4.04419556011827,1.59857431606684,0,1.92974780784272,1.04091196059682,9.13396434936424,11.992005857315,11.9070886036572,5.52666923537813,4.64966387919799,0.988779870937496,1.15679485535929,0,1.94120219936891,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0.255457055208591,0,0,0,1.49790639404823,2.74500361691176,0.376963056338593,1.39059456153821,1.79000820131231,2.0778804455956,1.29793010454206,0.305518091550949,0.373220911830279,1.0108910337347,0.631325567659422,0.130120442962704,0,0.180062129805349,0.150704817835715,0.476255494059295,0.2562274405697,0.468508622798644,0.776110112217047,0,0.378212160335639,0.175951124163949,0.657587197282725,0,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0,0.703578179943289,0,0.473489471170421,0.983821158737019,0.308534225774757,0.930135779001631,2.68273401399619,2.10177616260905,2.63295759861569,5.58169377868924,5.10733500138891,7.01759939641595,6.58650345873152,6.57611451925822,1.05144974282064,0.205809224758569,0.330418782983798,0,0.213288250535234,0,0,0,0,0.190225626112559,0.474529061544512,0.988193728344065,0.251335208800269,0.198956472041151,0,0,0,0.398282546508734,0.189667900953082,0.913988100877831,0,0,0,0.280543279561274,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0.358794827043824,0.482443521363367,1.66277871149944,0.37898282354097,0.162964976442026,0,0,0,1.42826184531608,0.390267295715598,0.630540576424764,0.221464689648775,0.318909537314974,2.45794972073607,1.72684981865896,2.74833211304872,0,0,1.47529281905711,0.827810238914197,3.21101179975584,2.69586879162067,0.819674726883377,3.7870639080656,0.631016438832513,1.17131623288992,0.430846795465598,0,0.668396022247182,0.566153061577665,0,0.292255857911312,0.395287777946524,1.60660658210904,2.2710413633323,0.178065603667255,0.162886959353576,0.329940245945071,2.65490276679926,0,0,0,0,0.614870295887855,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0,0.36012218806262,0.258717367565509,0.857348140126369,0.177340233642274,0.356737635204141,0.658196082408484,2.43571959291679,0.469343416127421,1.69465656691056,5.73373834942901,7.09010887648364,0.968786560175433,1.26657142349127,2.74556391207214,6.07321329056727,0.291480836629851,2.03967832211561,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0,0.432021363287205,0.209088296014469,1.31017538247707,0.944050424693745,0.330613822901344,1.04702376793612,0,11.1841076355647,0.56369293868419,0.149516546043979,0.496375471371293,0.972255941720238,0.904118764344118,0.168956125490778,0.469428954583016,0.13020438484395,0,0,0.288030006257865,0.632022241256357,0,0.308132871494482,0,0.179026695667481,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0.504130925684203,0.682205165178267,0.769694733122636,1.05189211963412,1.58711268530648,0.221985953374065,0.179427713218951,1.00730769818447,0.386379188064381,0.563047426353546,0.36630324853453,7.93163002592544,8.02515366456581,2.82375921308533,1.84130094602871,0.572895513439397,2.40594455281163,1.37016503954128,2.2661816921691,3.37511250115903,2.70192721934532,1.81256963593682,1.55328093525546,0,0,0.512200817262403,0.243106717068294,0.419226325255965,0.735374033800057,0.666740183404846,1.03017528619447,2.24643446714271,0.758091635291392,0.50695859978048,1.32038438970253,1.03005658216871,0.576226371643824,0.516919220600519,0.476293691283074,0.231768651889711,0.38581844092741,0,0.883193520806384,0.685738504770831,0.887379030796687,0,0.290692833264657,0.846984423737976,0.761531471025089,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,1.22769312950907,0.464810523557898,0.385813221962283,0.749431733813838,0.935726433781634,1.28922632428979,2.48674831689496,4.63241980150983,3.94175320554716 | |||
|short_description=p@chr2:155102816..155102842,+ | |||
}} |
Latest revision as of 08:23, 4 August 2015
Short description: | p@chr2:155102816..155102842, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:155102816..155102842, + |
Coexpression cluster: | MCL_coexpression_mm9:891 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.80e-13 | 92 |
regional part of nervous system | 1.17e-09 | 54 |
ectoderm-derived structure | 4.32e-09 | 95 |
ectoderm | 4.32e-09 | 95 |
presumptive ectoderm | 4.32e-09 | 95 |
central nervous system | 7.82e-09 | 73 |
nervous system | 2.60e-08 | 75 |
neural tube | 2.97e-08 | 52 |
neural rod | 2.97e-08 | 52 |
future spinal cord | 2.97e-08 | 52 |
neural keel | 2.97e-08 | 52 |
gray matter | 5.07e-08 | 34 |
anatomical conduit | 6.69e-08 | 122 |
intermediate mesoderm | 1.11e-07 | 14 |
ecto-epithelium | 1.77e-07 | 73 |
adrenal gland | 1.80e-07 | 7 |
adrenal/interrenal gland | 1.80e-07 | 7 |