Personal tools

FFCP PHASE1:Mm9::chr8:95721698..95721708,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=104158|HGNC=|MCL_coexpression_id=2438|UniProt=Q8VCT4|association_with_transcript=0bp_to_NM_053200,uc009mun.1_5end|description=CAGE_peak_3_at_Ces1d_5end|id=chr8:95721698..95721708,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.79e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!3.29e-17!79;UBERON:0001041!4.72e-16!92;UBERON:0000077!6.30e-16!97;UBERON:0001007!3.45e-15!128;UBERON:0001555!3.45e-15!128;UBERON:0007026!3.45e-15!128;UBERON:0004921!6.28e-15!126;UBERON:0004185!6.28e-15!126;UBERON:0004119!2.09e-14!130;UBERON:0000925!2.09e-14!130;UBERON:0006595!2.09e-14!130;UBERON:0005177!1.90e-13!85;UBERON:0009854!2.26e-12!23;UBERON:0009856!2.26e-12!23;UBERON:0002365!2.62e-12!25;UBERON:0002330!2.62e-12!25;UBERON:0003104!5.54e-12!131;UBERON:0009142!5.54e-12!131;UBERON:0005911!6.12e-12!69;UBERON:0002107!9.73e-12!22;UBERON:0007499!9.73e-12!22;UBERON:0006925!9.73e-12!22;UBERON:0009497!9.73e-12!22;UBERON:0000015!9.73e-12!22;UBERON:0002423!9.73e-12!22;UBERON:0006235!9.73e-12!22;UBERON:0008835!9.73e-12!22;UBERON:0003894!9.73e-12!22;UBERON:0004161!9.73e-12!22;UBERON:0008836!9.73e-12!22;UBERON:0009569!3.39e-11!66;UBERON:0002100!7.26e-11!98;UBERON:0000949!5.29e-10!72;UBERON:0005153!5.17e-08!17;UBERON:0002048!9.06e-08!14;UBERON:0000117!9.06e-08!14;UBERON:0000171!9.06e-08!14;UBERON:0000170!9.06e-08!14;UBERON:0005597!9.06e-08!14;UBERON:0000118!9.06e-08!14;UBERON:0000464!1.52e-07!57;UBERON:0003914!3.28e-07!47;UBERON:0002530!4.29e-07!65;UBERON:0001045!8.25e-07!13;UBERON:0005178!8.32e-07!17;UBERON:0005181!8.32e-07!17;UBERON:0002224!8.32e-07!17;UBERON:0000915!8.32e-07!17;UBERON:0008947!8.32e-07!17;UBERON:0003258!8.32e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.30e-22,79;UBERON:0002100,1.82e-17,90;UBERON:0009854,8.80e-17,23;UBERON:0009856,8.80e-17,23;UBERON:0002107,8.93e-16,22;UBERON:0007499,8.93e-16,22;UBERON:0006925,8.93e-16,22;UBERON:0009497,8.93e-16,22;UBERON:0000015,8.93e-16,22;UBERON:0002423,8.93e-16,22;UBERON:0006235,8.93e-16,22;UBERON:0008835,8.93e-16,22;UBERON:0003894,8.93e-16,22;UBERON:0004161,8.93e-16,22;UBERON:0008836,8.93e-16,22;UBERON:0002365,9.92e-15,25;UBERON:0002330,9.92e-15,25;UBERON:0009569,1.46e-14,66;UBERON:0005911,1.52e-12,69;UBERON:0003914,5.31e-11,47;UBERON:0001041,7.78e-11,80;UBERON:0002048,1.26e-09,14;UBERON:0000117,1.26e-09,14;UBERON:0000171,1.26e-09,14;UBERON:0000170,1.26e-09,14;UBERON:0005597,1.26e-09,14;UBERON:0000118,1.26e-09,14;UBERON:0004921,6.07e-09,114;UBERON:0001007,1.42e-08,116;UBERON:0001555,1.42e-08,116;UBERON:0007026,1.42e-08,116;UBERON:0005172,1.93e-08,49;UBERON:0005173,1.93e-08,49;UBERON:0002417,1.93e-08,49;UBERON:0000916,1.93e-08,49;UBERON:0004119,3.22e-08,118;UBERON:0000925,3.22e-08,118;UBERON:0006595,3.22e-08,118;UBERON:0000949,4.18e-08,72;UBERON:0001264,4.52e-08,12;UBERON:0005256,9.62e-08,45;UBERON:0004111,2.37e-07,122;UBERON:0005153,2.42e-07,17;UBERON:0005178,2.42e-07,17;UBERON:0005181,2.42e-07,17;UBERON:0002224,2.42e-07,17;UBERON:0000915,2.42e-07,17;UBERON:0008947,2.42e-07,17;UBERON:0003258,2.42e-07,17|phase1_expression=0,0,0,0.60492842261366,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37824676133023,0,0,0.319984845586813,0.45881856213434,0,0.86152399231815,0.215471232685889,0,0,0,0,0,0,4.33277429626912,6.64938581433969,3.67504841272264,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7540375028738,12.9063581547208,19.039197343817,25.3660500069774,39.6363614643078,26.4335863387428,12.3591089715942,0.852151612890289,0.519572009205738,1.06001872353102,1.83096445709685,5.13305909657271,5.09610479413291,0,0.649473123033642,0.253359865475099,0,24.8920857787551,0,0.742210695324124,0,0,0,0,0.117588707135705,0.879666139307728,0,7.51916655983541,0,0,0,0,9.31958806090611,0,0,0.255457055208591,0,0,0,0,0.457500602818626,0,0,0,0,0,0.203678727700633,3.73220911830279,9.35074206204597,7.36546495602659,0,0,0,0,0.0680364991513279,0,0.0937017245597288,2.58703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0.329119699826961,2.29834449710733,2.91847714365081,4.82459958503597,2.19550115291051,4.02619256281115,0,0,2.97376904685418,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.795825888164603,0.58489226135736,0,2.16138049874694,3.58454291857861,0,0,0,0,0.193952487167626,0,0.442655759869801,2.80459281161244,4.70996183524124,11.3525390808056,106.426493124286,0.166845105716094,0,0.449724224769707,0.811440485554012,1.92941727801933,3.31013607315846,4.89083433666378,3.24270453550071,16.1991233780968,15.814502718009,22.3284568601102,20.2824487524464,35.1084640346485,24.9362404795458,21.2275149399882,15.888774354328,1.32643988239339,0.325929952884052,0.678980343100753,2.34690248288502,6.70025029767263,8.33152743101048,6.82967767502296,4.57141917907954,4.20782910332672,3.82691444777969,9.01248230936559,9.49767400262426,14.0309586824066,0,0,0.983528546038072,0.275936746304732,0,0,0,1.00988370881749,0,0,0,0,0.222798674082394,0,0,0,0,0,2.6968616189571,0.890328018336276,0.977321756121456,24.0856379539902,1.32745138339963,1.69946445308487,0.604647113929502,1.88605079755898,3.2483208216885,2.76691633149535,2.32585463851399,6.18007340111759,6.41695281092498,4.42451461110142,3.16255825724996,7.21948802737308,1.36175842301515,0.18006109403131,0.517434735131018,0.214337035031592,0.532020700926821,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0.882113592219848,0.98931751764888,0,0,0,0.164140899745061,0,0,0,0,0,0.188368457004691,0,0,0,0,0,2.86401185404534,0.316335993581135,0.609958401380546,0.108005340821801,0,0,0.674321731924103,1.73572257023205,0.523511883968059,22.0345454596048,4.34937519160848,0,0,0,0,0,0,0.117357238645754,0.651021924219751,0,0,2.59227005632079,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0.147689527174577,0.403865799792591,0.304827226619999,0.100826185136841,0.292373642219257,0.0962118416403295,0,2.49403421976732,0,0,0,1.35232715822533,0.187682475451182,7.14291334642334,0.643105137237198,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.551530525350042,0.44449345560323,1.03017528619447,0.64183841918363,1.01078884705519,1.2673964994512,0.377252682772152,0.936415074698824,0.704276676453562,0.804096565378586,0.952587382566147,1.27472758539341,0.38581844092741,0.824171801606613,0.147198920134397,0.685738504770831,0.177475806159338,0.476872379894642,0.436039249896986,0.752875043322645,0.761531471025089,0.914639864363863,0.263069711437843,0.543216455383447,0.561142271657738,0.593175090620871,0.492522411877817,0.818462086339379,1.23949472948773,0.578719832943424,0.249810577937946,0.935726433781634,1.07435527024149,0.191288332068843,1.10295709559758,0.927471342481686|short_description=p3@Ces1d}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:104158
|HGNC=
|MCL_coexpression_id=2438
|TSSclassifier=NA
|UniProt=uniprot:Q8VCT4
|association_with_transcript=0bp_to_NM_053200,uc009mun.1_5end
|cluster_id=chr8:95721698..95721708,-
|description=CAGE_peak_3_at_Ces1d_5end
|id=chr8:95721698..95721708,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,1.79e-07,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000466!3.29e-17!79;UBERON:0001041!4.72e-16!92;UBERON:0000077!6.30e-16!97;UBERON:0001007!3.45e-15!128;UBERON:0001555!3.45e-15!128;UBERON:0007026!3.45e-15!128;UBERON:0004921!6.28e-15!126;UBERON:0004185!6.28e-15!126;UBERON:0004119!2.09e-14!130;UBERON:0000925!2.09e-14!130;UBERON:0006595!2.09e-14!130;UBERON:0005177!1.90e-13!85;UBERON:0009854!2.26e-12!23;UBERON:0009856!2.26e-12!23;UBERON:0002365!2.62e-12!25;UBERON:0002330!2.62e-12!25;UBERON:0003104!5.54e-12!131;UBERON:0009142!5.54e-12!131;UBERON:0005911!6.12e-12!69;UBERON:0002107!9.73e-12!22;UBERON:0007499!9.73e-12!22;UBERON:0006925!9.73e-12!22;UBERON:0009497!9.73e-12!22;UBERON:0000015!9.73e-12!22;UBERON:0002423!9.73e-12!22;UBERON:0006235!9.73e-12!22;UBERON:0008835!9.73e-12!22;UBERON:0003894!9.73e-12!22;UBERON:0004161!9.73e-12!22;UBERON:0008836!9.73e-12!22;UBERON:0009569!3.39e-11!66;UBERON:0002100!7.26e-11!98;UBERON:0000949!5.29e-10!72;UBERON:0005153!5.17e-08!17;UBERON:0002048!9.06e-08!14;UBERON:0000117!9.06e-08!14;UBERON:0000171!9.06e-08!14;UBERON:0000170!9.06e-08!14;UBERON:0005597!9.06e-08!14;UBERON:0000118!9.06e-08!14;UBERON:0000464!1.52e-07!57;UBERON:0003914!3.28e-07!47;UBERON:0002530!4.29e-07!65;UBERON:0001045!8.25e-07!13;UBERON:0005178!8.32e-07!17;UBERON:0005181!8.32e-07!17;UBERON:0002224!8.32e-07!17;UBERON:0000915!8.32e-07!17;UBERON:0008947!8.32e-07!17;UBERON:0003258!8.32e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.30e-22,79;UBERON:0002100,1.82e-17,90;UBERON:0009854,8.80e-17,23;UBERON:0009856,8.80e-17,23;UBERON:0002107,8.93e-16,22;UBERON:0007499,8.93e-16,22;UBERON:0006925,8.93e-16,22;UBERON:0009497,8.93e-16,22;UBERON:0000015,8.93e-16,22;UBERON:0002423,8.93e-16,22;UBERON:0006235,8.93e-16,22;UBERON:0008835,8.93e-16,22;UBERON:0003894,8.93e-16,22;UBERON:0004161,8.93e-16,22;UBERON:0008836,8.93e-16,22;UBERON:0002365,9.92e-15,25;UBERON:0002330,9.92e-15,25;UBERON:0009569,1.46e-14,66;UBERON:0005911,1.52e-12,69;UBERON:0003914,5.31e-11,47;UBERON:0001041,7.78e-11,80;UBERON:0002048,1.26e-09,14;UBERON:0000117,1.26e-09,14;UBERON:0000171,1.26e-09,14;UBERON:0000170,1.26e-09,14;UBERON:0005597,1.26e-09,14;UBERON:0000118,1.26e-09,14;UBERON:0004921,6.07e-09,114;UBERON:0001007,1.42e-08,116;UBERON:0001555,1.42e-08,116;UBERON:0007026,1.42e-08,116;UBERON:0005172,1.93e-08,49;UBERON:0005173,1.93e-08,49;UBERON:0002417,1.93e-08,49;UBERON:0000916,1.93e-08,49;UBERON:0004119,3.22e-08,118;UBERON:0000925,3.22e-08,118;UBERON:0006595,3.22e-08,118;UBERON:0000949,4.18e-08,72;UBERON:0001264,4.52e-08,12;UBERON:0005256,9.62e-08,45;UBERON:0004111,2.37e-07,122;UBERON:0005153,2.42e-07,17;UBERON:0005178,2.42e-07,17;UBERON:0005181,2.42e-07,17;UBERON:0002224,2.42e-07,17;UBERON:0000915,2.42e-07,17;UBERON:0008947,2.42e-07,17;UBERON:0003258,2.42e-07,17
|phase1_expression=0,0,0,0.60492842261366,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37824676133023,0,0,0.319984845586813,0.45881856213434,0,0.86152399231815,0.215471232685889,0,0,0,0,0,0,4.33277429626912,6.64938581433969,3.67504841272264,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7540375028738,12.9063581547208,19.039197343817,25.3660500069774,39.6363614643078,26.4335863387428,12.3591089715942,0.852151612890289,0.519572009205738,1.06001872353102,1.83096445709685,5.13305909657271,5.09610479413291,0,0.649473123033642,0.253359865475099,0,24.8920857787551,0,0.742210695324124,0,0,0,0,0.117588707135705,0.879666139307728,0,7.51916655983541,0,0,0,0,9.31958806090611,0,0,0.255457055208591,0,0,0,0,0.457500602818626,0,0,0,0,0,0.203678727700633,3.73220911830279,9.35074206204597,7.36546495602659,0,0,0,0,0.0680364991513279,0,0.0937017245597288,2.58703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0.329119699826961,2.29834449710733,2.91847714365081,4.82459958503597,2.19550115291051,4.02619256281115,0,0,2.97376904685418,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.795825888164603,0.58489226135736,0,2.16138049874694,3.58454291857861,0,0,0,0,0.193952487167626,0,0.442655759869801,2.80459281161244,4.70996183524124,11.3525390808056,106.426493124286,0.166845105716094,0,0.449724224769707,0.811440485554012,1.92941727801933,3.31013607315846,4.89083433666378,3.24270453550071,16.1991233780968,15.814502718009,22.3284568601102,20.2824487524464,35.1084640346485,24.9362404795458,21.2275149399882,15.888774354328,1.32643988239339,0.325929952884052,0.678980343100753,2.34690248288502,6.70025029767263,8.33152743101048,6.82967767502296,4.57141917907954,4.20782910332672,3.82691444777969,9.01248230936559,9.49767400262426,14.0309586824066,0,0,0.983528546038072,0.275936746304732,0,0,0,1.00988370881749,0,0,0,0,0.222798674082394,0,0,0,0,0,2.6968616189571,0.890328018336276,0.977321756121456,24.0856379539902,1.32745138339963,1.69946445308487,0.604647113929502,1.88605079755898,3.2483208216885,2.76691633149535,2.32585463851399,6.18007340111759,6.41695281092498,4.42451461110142,3.16255825724996,7.21948802737308,1.36175842301515,0.18006109403131,0.517434735131018,0.214337035031592,0.532020700926821,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0.882113592219848,0.98931751764888,0,0,0,0.164140899745061,0,0,0,0,0,0.188368457004691,0,0,0,0,0,2.86401185404534,0.316335993581135,0.609958401380546,0.108005340821801,0,0,0.674321731924103,1.73572257023205,0.523511883968059,22.0345454596048,4.34937519160848,0,0,0,0,0,0,0.117357238645754,0.651021924219751,0,0,2.59227005632079,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0.147689527174577,0.403865799792591,0.304827226619999,0.100826185136841,0.292373642219257,0.0962118416403295,0,2.49403421976732,0,0,0,1.35232715822533,0.187682475451182,7.14291334642334,0.643105137237198,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.551530525350042,0.44449345560323,1.03017528619447,0.64183841918363,1.01078884705519,1.2673964994512,0.377252682772152,0.936415074698824,0.704276676453562,0.804096565378586,0.952587382566147,1.27472758539341,0.38581844092741,0.824171801606613,0.147198920134397,0.685738504770831,0.177475806159338,0.476872379894642,0.436039249896986,0.752875043322645,0.761531471025089,0.914639864363863,0.263069711437843,0.543216455383447,0.561142271657738,0.593175090620871,0.492522411877817,0.818462086339379,1.23949472948773,0.578719832943424,0.249810577937946,0.935726433781634,1.07435527024149,0.191288332068843,1.10295709559758,0.927471342481686
|short_description=p3@Ces1d
}}

Revision as of 08:40, 4 August 2015

Short description:p3@Ces1d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ces1d_5end
Coexpression cluster:MCL_coexpression_mm9:2438
Association with transcript: 0bp_to_NM_053200, uc009mun.1_5end
EntrezGene:104158
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
20
40
60
80
100
120




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data