FFCP PHASE1:Mm9::chr8:96334452..96334463,+: Difference between revisions
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{{FFCP|EntrezGene=14681|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=-72bp_to_ENSMUST00000125695_5end|description=CAGE_peak_4_at_Gnao1_5end|id=chr8:96334452..96334463,+|ontology_enrichment_celltype=CL:0002319!1.69e-15!43;CL:0000221!3.97e-15!44;CL:0000133!3.97e-15!44;CL:0000117!3.91e-14!23;CL:0000337!3.91e-14!23;CL:0000540!2.77e-13!33;CL:0000047!2.77e-13!33;CL:0000031!2.77e-13!33;CL:0000404!2.77e-13!33;CL:0000055!1.99e-12!50;CL:0000393!7.41e-11!39;CL:0000211!7.41e-11!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.66e-17,23;CL:0000337,4.66e-17,23;CL:0002319,1.35e-16,43;CL:0000221,7.43e-16,44;CL:0000133,7.43e-16,44;CL:0000540,2.27e-14,33;CL:0000047,2.27e-14,33;CL:0000031,2.27e-14,33;CL:0000404,2.27e-14,33;CL:0000393,1.01e-11,39;CL:0000211,1.01e-11,39;CL:0002321,2.08e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.09e-33!73;UBERON:0005743!1.09e-33!73;UBERON:0000073!1.20e-33!75;UBERON:0001016!1.20e-33!75;UBERON:0004121!2.30e-29!102;UBERON:0000924!2.30e-29!102;UBERON:0006601!2.30e-29!102;UBERON:0002346!1.93e-28!71;UBERON:0003075!1.93e-28!71;UBERON:0007284!1.93e-28!71;UBERON:0001049!3.50e-28!52;UBERON:0005068!3.50e-28!52;UBERON:0006241!3.50e-28!52;UBERON:0007135!3.50e-28!52;UBERON:0000033!2.56e-27!63;UBERON:0000955!1.43e-26!50;UBERON:0006238!1.43e-26!50;UBERON:0002616!6.48e-26!49;UBERON:0003056!2.20e-23!49;UBERON:0003080!9.54e-22!40;UBERON:0002020!1.53e-21!34;UBERON:0002780!3.54e-21!39;UBERON:0001890!3.54e-21!39;UBERON:0006240!3.54e-21!39;UBERON:0002791!1.85e-18!29;UBERON:0003528!1.85e-18!29;UBERON:0001893!1.85e-18!29;UBERON:0007811!1.51e-14!86;UBERON:0000956!1.14e-13!21;UBERON:0001869!1.14e-13!21;UBERON:0000203!1.14e-13!21;UBERON:0000153!4.62e-12!94;UBERON:0002619!2.81e-11!17;UBERON:0000025!2.55e-08!114;UBERON:0004111!2.73e-08!122;UBERON:0002021!7.11e-08!10;UBERON:0000411!7.11e-08!10;UBERON:0001950!7.11e-08!10;UBERON:0003076!6.66e-07!12;UBERON:0003057!6.66e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.05e-39,73;UBERON:0001016,1.58e-38,75;UBERON:0002346,3.51e-37,64;UBERON:0003075,3.51e-37,64;UBERON:0007284,3.51e-37,64;UBERON:0000073,9.89e-36,54;UBERON:0001049,2.11e-34,52;UBERON:0005068,2.11e-34,52;UBERON:0006241,2.11e-34,52;UBERON:0007135,2.11e-34,52;UBERON:0004121,1.20e-33,95;UBERON:0000924,1.20e-33,95;UBERON:0006601,1.20e-33,95;UBERON:0000955,2.42e-30,47;UBERON:0006238,2.42e-30,47;UBERON:0002616,1.52e-29,46;UBERON:0010371,4.61e-29,73;UBERON:0003056,1.79e-28,49;UBERON:0003080,1.88e-26,40;UBERON:0002020,3.36e-26,34;UBERON:0002780,9.49e-26,39;UBERON:0001890,9.49e-26,39;UBERON:0006240,9.49e-26,39;UBERON:0010314,1.83e-25,92;UBERON:0003528,2.15e-22,29;UBERON:0002791,2.15e-22,29;UBERON:0001893,2.15e-22,29;UBERON:0000956,1.75e-16,21;UBERON:0001869,1.75e-16,21;UBERON:0000203,1.75e-16,21;UBERON:0002619,1.55e-13,17;UBERON:0000025,1.31e-09,114;UBERON:0002021,2.41e-09,10;UBERON:0000411,2.41e-09,10;UBERON:0001950,2.41e-09,10;UBERON:0004111,8.18e-09,122;UBERON:0003076,3.76e-08,12;UBERON:0003057,3.76e-08,12;UBERON:0002420,4.83e-07,8;UBERON:0007245,4.83e-07,8;UBERON:0010009,4.83e-07,8;UBERON:0010011,4.83e-07,8;UBERON:0000454,4.83e-07,8|phase1_expression=0.640595388419176,0,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608261587317087,1.10128051297009,1.56478268869608,3.2703773457067,2.19686182734472,3.69416808241138,1.81982348112971,4.31257693094915,0,0,0,0.257259436035947,2.0057340795713,0,16.589949790487,11.6378015439847,10.1413024560989,1.35537812827653,1.77858959222228,0,0.988866362566974,0,2.39680088414724,2.68952813725088,14.4128561108784,12.4205463265155,14.302097371894,10.2834354385369,10.6016899656774,10.656699531701,11.5014565221884,17.4651569455904,7.70811166995721,11.6195477657521,10.1380311949121,16.6176722540044,19.6698433745181,14.5855743755893,8.09630697104005,6.75315132038016,11.4598685832608,15.6153150301044,12.8134512719193,20.5039390407831,0.757261933331841,1.73814588245607,0,0,0,0,0,0,0.421333260395256,1.02258193546835,1.55871602761721,1.06001872353102,0.422530259330042,1.28326477414318,10.1922095882658,7.11066703153331,0,0,0,0.45673551887624,0,0.593768556259299,1.21439728736295,0.913396434936424,1.15307748628029,0.301445281105245,0.940709657085638,0.125666591329675,0,2.89198713839823,0,0.647067399789637,0.883366073841574,0.969750506270444,1.86391761218122,9.66176630138106,7.54008144528438,0,0,0,0,11.3840885947665,13.7250180845588,17.591609295801,14.0797699355744,15.8543583544805,9.97382613885888,11.0324058886075,0.611036183101898,0.124406970610093,0.252722758433675,1.89397670297827,1.04096354370163,1.60931473103431,1.44049703844279,2.41127708537144,3.06164246180975,2.0498195245576,2.43624483855295,3.62184719034622,0,0.567318240503458,0.175951124163949,0,0.278047249225598,1.0447564995665,0.411564272815887,0.199034266818493,0,0,0,1.24275463521301,0.469052119962192,1.62055855314913,1.42046841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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14681 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-72bp_to_ENSMUST00000125695_5end | |||
|cluster_id=chr8:96334452..96334463,+ | |||
|description=CAGE_peak_4_at_Gnao1_5end | |||
|id=chr8:96334452..96334463,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.69e-15!43;CL:0000221!3.97e-15!44;CL:0000133!3.97e-15!44;CL:0000117!3.91e-14!23;CL:0000337!3.91e-14!23;CL:0000540!2.77e-13!33;CL:0000047!2.77e-13!33;CL:0000031!2.77e-13!33;CL:0000404!2.77e-13!33;CL:0000055!1.99e-12!50;CL:0000393!7.41e-11!39;CL:0000211!7.41e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.66e-17,23;CL:0000337,4.66e-17,23;CL:0002319,1.35e-16,43;CL:0000221,7.43e-16,44;CL:0000133,7.43e-16,44;CL:0000540,2.27e-14,33;CL:0000047,2.27e-14,33;CL:0000031,2.27e-14,33;CL:0000404,2.27e-14,33;CL:0000393,1.01e-11,39;CL:0000211,1.01e-11,39;CL:0002321,2.08e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.09e-33!73;UBERON:0005743!1.09e-33!73;UBERON:0000073!1.20e-33!75;UBERON:0001016!1.20e-33!75;UBERON:0004121!2.30e-29!102;UBERON:0000924!2.30e-29!102;UBERON:0006601!2.30e-29!102;UBERON:0002346!1.93e-28!71;UBERON:0003075!1.93e-28!71;UBERON:0007284!1.93e-28!71;UBERON:0001049!3.50e-28!52;UBERON:0005068!3.50e-28!52;UBERON:0006241!3.50e-28!52;UBERON:0007135!3.50e-28!52;UBERON:0000033!2.56e-27!63;UBERON:0000955!1.43e-26!50;UBERON:0006238!1.43e-26!50;UBERON:0002616!6.48e-26!49;UBERON:0003056!2.20e-23!49;UBERON:0003080!9.54e-22!40;UBERON:0002020!1.53e-21!34;UBERON:0002780!3.54e-21!39;UBERON:0001890!3.54e-21!39;UBERON:0006240!3.54e-21!39;UBERON:0002791!1.85e-18!29;UBERON:0003528!1.85e-18!29;UBERON:0001893!1.85e-18!29;UBERON:0007811!1.51e-14!86;UBERON:0000956!1.14e-13!21;UBERON:0001869!1.14e-13!21;UBERON:0000203!1.14e-13!21;UBERON:0000153!4.62e-12!94;UBERON:0002619!2.81e-11!17;UBERON:0000025!2.55e-08!114;UBERON:0004111!2.73e-08!122;UBERON:0002021!7.11e-08!10;UBERON:0000411!7.11e-08!10;UBERON:0001950!7.11e-08!10;UBERON:0003076!6.66e-07!12;UBERON:0003057!6.66e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.05e-39,73;UBERON:0001016,1.58e-38,75;UBERON:0002346,3.51e-37,64;UBERON:0003075,3.51e-37,64;UBERON:0007284,3.51e-37,64;UBERON:0000073,9.89e-36,54;UBERON:0001049,2.11e-34,52;UBERON:0005068,2.11e-34,52;UBERON:0006241,2.11e-34,52;UBERON:0007135,2.11e-34,52;UBERON:0004121,1.20e-33,95;UBERON:0000924,1.20e-33,95;UBERON:0006601,1.20e-33,95;UBERON:0000955,2.42e-30,47;UBERON:0006238,2.42e-30,47;UBERON:0002616,1.52e-29,46;UBERON:0010371,4.61e-29,73;UBERON:0003056,1.79e-28,49;UBERON:0003080,1.88e-26,40;UBERON:0002020,3.36e-26,34;UBERON:0002780,9.49e-26,39;UBERON:0001890,9.49e-26,39;UBERON:0006240,9.49e-26,39;UBERON:0010314,1.83e-25,92;UBERON:0003528,2.15e-22,29;UBERON:0002791,2.15e-22,29;UBERON:0001893,2.15e-22,29;UBERON:0000956,1.75e-16,21;UBERON:0001869,1.75e-16,21;UBERON:0000203,1.75e-16,21;UBERON:0002619,1.55e-13,17;UBERON:0000025,1.31e-09,114;UBERON:0002021,2.41e-09,10;UBERON:0000411,2.41e-09,10;UBERON:0001950,2.41e-09,10;UBERON:0004111,8.18e-09,122;UBERON:0003076,3.76e-08,12;UBERON:0003057,3.76e-08,12;UBERON:0002420,4.83e-07,8;UBERON:0007245,4.83e-07,8;UBERON:0010009,4.83e-07,8;UBERON:0010011,4.83e-07,8;UBERON:0000454,4.83e-07,8 | |||
|phase1_expression=0.640595388419176,0,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608261587317087,1.10128051297009,1.56478268869608,3.2703773457067,2.19686182734472,3.69416808241138,1.81982348112971,4.31257693094915,0,0,0,0.257259436035947,2.0057340795713,0,16.589949790487,11.6378015439847,10.1413024560989,1.35537812827653,1.77858959222228,0,0.988866362566974,0,2.39680088414724,2.68952813725088,14.4128561108784,12.4205463265155,14.302097371894,10.2834354385369,10.6016899656774,10.656699531701,11.5014565221884,17.4651569455904,7.70811166995721,11.6195477657521,10.1380311949121,16.6176722540044,19.6698433745181,14.5855743755893,8.09630697104005,6.75315132038016,11.4598685832608,15.6153150301044,12.8134512719193,20.5039390407831,0.757261933331841,1.73814588245607,0,0,0,0,0,0,0.421333260395256,1.02258193546835,1.55871602761721,1.06001872353102,0.422530259330042,1.28326477414318,10.1922095882658,7.11066703153331,0,0,0,0.45673551887624,0,0.593768556259299,1.21439728736295,0.913396434936424,1.15307748628029,0.301445281105245,0.940709657085638,0.125666591329675,0,2.89198713839823,0,0.647067399789637,0.883366073841574,0.969750506270444,1.86391761218122,9.66176630138106,7.54008144528438,0,0,0,0,11.3840885947665,13.7250180845588,17.591609295801,14.0797699355744,15.8543583544805,9.97382613885888,11.0324058886075,0.611036183101898,0.124406970610093,0.252722758433675,1.89397670297827,1.04096354370163,1.60931473103431,1.44049703844279,2.41127708537144,3.06164246180975,2.0498195245576,2.43624483855295,3.62184719034622,0,0.567318240503458,0.175951124163949,0,0.278047249225598,1.0447564995665,0.411564272815887,0.199034266818493,0,0,0,1.24275463521301,0.469052119962192,1.62055855314913,1.42046841351126,0.393528463494808,1.85120535464854,1.16266972375204,0,1.63471479314037,0,0.985004784474571,1.4592385718254,0.877199924551994,1.3173006917463,0.939444931322602,13.8791366052324,17.4937841044784,0,0,0.639864751605702,1.16118335930219,0.902072229254653,0.80673409849337,0.444756087689741,0.951128130562796,0,0.164698954724011,0.251335208800269,1.59165177632921,0.779856348476481,0,0.432276099749388,0.199141273254367,0.189667900953082,0.456994050438915,0,0,0.193952487167626,0.280543279561274,0.252946148497029,0.442830443938806,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0.624075346229121,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0.169745085775188,0.234690248288502,0.670025029767263,0.714130922658041,0.585400943573396,1.10344600874334,1.10732344824387,1.11618338060241,0.163863314715738,0.345369963731791,0.723245292907558,0,0,0,0,8.99083303931635,10.6662634798905,1.63934945376675,1.00988370881749,2.2085575359138,1.17131623288992,1.72338718186239,1.19484398976276,0.668396022247182,1.69845918473299,0.809621403349789,1.75353514746787,1.18586333383957,13.1741739732941,0.709700426041343,0.534196811001766,0.488660878060728,0.329940245945071,0,0.242780636154981,0.906970670894253,0.188605079755898,0,0,0.258428293168221,0,0.712994756769443,1.26414703174326,0,0,4.42571487479924,1.62054984628179,1.94038025674132,1.50035924522115,2.12808280370728,2.67553226403106,3.62007845324666,2.74018454203139,0,0.63549621259146,0.882113592219848,0.8244312647074,0.322928853391811,0.422190474497091,0.238744688006273,0.164140899745061,0.291480836629851,12.0526446306831,0.170870880797853,0.412773735926445,0,0.188368457004691,0,0,0,0,0,0,0.316335993581135,1.42323626988794,0.648032044930808,0.209088296014469,0.655087691238533,0.944050424693745,0.826534557253359,0.26175594198403,0.388844919875379,1.24267862617385,1.69107881605257,0.448549638131936,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0,0.209718688851422,1.69108884578204,0.864090018773596,0,0.608175645870493,0.616265742988964,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0.680191150845634,0.665957860122194,0.717710852875806,1.17519231454855,2.70465431645067,0.93841237725591,0.36630324853453,0,1.00314420807073,24.2843292325339,22.5559365888517,22.9158205375759,25.0905646221784,14.3867329151835,14.3524840504043,14.1754725048679,15.3109209096235,12.2348450425735,14.497288729051,0.830298780673413,1.19707462020309,1.70733605754134,3.16038732188782,3.14419743941973,3.67687016900028,1.77797382241292,2.67845574410562,3.53011130550997,1.76888048234658,2.28131369901216,2.07488975524684,3.27745276144588,2.75308155340938,2.98664438569189,2.38146845641537,2.89710814862139,2.89363830695558,0.824171801606613,2.06078488188156,2.40008476669791,1.24233064311536,1.66905332963125,2.0348498328526,2.1645157495526,2.79228206042532,2.37806364734604,3.41990624869196,2.58027816307137,5.61142271657738,3.55905054372522,2.36410757701352,2.86461730218783,2.47898945897546,1.92906610981141,3.2475375131933,1.63752125911786,2.36358159453128,1.53030665655075,0.661774257358546,0.463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| |||
|short_description=p4@Gnao1 | |||
}} |
Revision as of 08:45, 4 August 2015
Short description: | p4@Gnao1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gnao1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -72bp_to_ENSMUST00000125695_5end |
EntrezGene: | 14681 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.66e-17 | 23 |
neuroblast (sensu Vertebrata) | 4.66e-17 | 23 |
neural cell | 1.35e-16 | 43 |
ectodermal cell | 7.43e-16 | 44 |
neurectodermal cell | 7.43e-16 | 44 |
neuron | 2.27e-14 | 33 |
neuronal stem cell | 2.27e-14 | 33 |
neuroblast | 2.27e-14 | 33 |
electrically signaling cell | 2.27e-14 | 33 |
electrically responsive cell | 1.01e-11 | 39 |
electrically active cell | 1.01e-11 | 39 |
embryonic cell | 2.08e-07 | 70 |