FFCP PHASE1:Mm9::chr2:163484251..163484262,+: Difference between revisions
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{{FFCP|EntrezGene=18769,622568|HGNC=|MCL_coexpression_id=3329|UniProt=B7ZC22|association_with_transcript=35bp_to_ENSMUST00000131228_5end|description=CAGE_peak_3_at_Gm6334_5end,CAGE_peak_3_at_Pkig_5end|id=chr2:163484251..163484262,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,4.79e-12,6;CL:0000556,4.79e-12,6;CL:0000050,4.41e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.08e-11!18;UBERON:0000948!2.08e-11!18;UBERON:0005498!2.08e-11!18;UBERON:0004140!2.08e-11!18;UBERON:0009881!2.08e-11!18;UBERON:0004141!2.08e-11!18;UBERON:0003084!2.08e-11!18;UBERON:0007005!2.08e-11!18;UBERON:0004139!2.08e-11!18;UBERON:0004291!2.08e-11!18;UBERON:0004535!8.17e-08!23;UBERON:0001009!8.17e-08!23;UBERON:0003103!1.65e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.40e-34,18;UBERON:0000948,1.40e-34,18;UBERON:0005498,1.40e-34,18;UBERON:0004140,1.40e-34,18;UBERON:0009881,1.40e-34,18;UBERON:0004141,1.40e-34,18;UBERON:0003084,1.40e-34,18;UBERON:0007005,1.40e-34,18;UBERON:0004139,1.40e-34,18;UBERON:0004291,1.40e-34,18;UBERON:0004535,1.16e-26,23;UBERON:0001009,1.16e-26,23;UBERON:0004872,5.17e-18,33;UBERON:0003103,8.53e-16,43;UBERON:0003081,2.33e-12,87;UBERON:0003914,4.54e-12,47;UBERON:0000926,3.39e-08,120;UBERON:0004120,3.39e-08,120;UBERON:0006603,3.39e-08,120|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,0,2.05050407482854,2.4680598049033,3.39511721438424,0.255129870453209,0.0992909512008853,0.261199789138935,0.639969691173627,0.68822784320151,0,0,0.430942465371778,0,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0.388859798148567,0,0,2.18117387875057,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.383062014255563,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0.186399445825301,0.227178579999552,0.226714680320357,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0,1.29468941823586,0.148442139064825,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0.884610551949874,0.970601099684455,1.10420759230197,0,0,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0,0,0,0.125654352112864,0.869121600961382,0.511430914660661,0,0.811206315338788,0.203678727700633,0.248813941220186,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.374806898238915,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.703578179943289,0.720248245844059,1.18372367792605,1.37734962223183,1.3884040159864,1.39520366850245,3.75582761959467,3.61972561338225,2.46839774870221,2.46251196118643,3.4859588104718,4.23979963533464,3.73235195994786,3.35516046900929,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.0632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0,0,0.488660878060728,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0.164549020602121,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0.512612642393558,0,0.370389054739423,0,0.410082683163076,0,0,0,0.138199973804424,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0,0,0,1.81384306892169,0,0,0,0.19318959403219,0,0,0,0,0,0.920650473014354,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0,0.906284817968409,0,0,0,0,0.486213434136588,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.114870937911227,0.952587382566147,0.231768651889711,0.77163688185482,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.543216455383447,0,0.355905054372522,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0.214871054048298,0.57386499620653,0.220591419119515,0|short_description=p3@Gm6334,p3@Pkig}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18769,entrezgene:622568 | |||
|HGNC= | |||
|MCL_coexpression_id=3329 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B7ZC22 | |||
|association_with_transcript=35bp_to_ENSMUST00000131228_5end | |||
|cluster_id=chr2:163484251..163484262,+ | |||
|description=CAGE_peak_3_at_Gm6334_5end,CAGE_peak_3_at_Pkig_5end | |||
|id=chr2:163484251..163484262,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.79e-12,6;CL:0000556,4.79e-12,6;CL:0000050,4.41e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.08e-11!18;UBERON:0000948!2.08e-11!18;UBERON:0005498!2.08e-11!18;UBERON:0004140!2.08e-11!18;UBERON:0009881!2.08e-11!18;UBERON:0004141!2.08e-11!18;UBERON:0003084!2.08e-11!18;UBERON:0007005!2.08e-11!18;UBERON:0004139!2.08e-11!18;UBERON:0004291!2.08e-11!18;UBERON:0004535!8.17e-08!23;UBERON:0001009!8.17e-08!23;UBERON:0003103!1.65e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.40e-34,18;UBERON:0000948,1.40e-34,18;UBERON:0005498,1.40e-34,18;UBERON:0004140,1.40e-34,18;UBERON:0009881,1.40e-34,18;UBERON:0004141,1.40e-34,18;UBERON:0003084,1.40e-34,18;UBERON:0007005,1.40e-34,18;UBERON:0004139,1.40e-34,18;UBERON:0004291,1.40e-34,18;UBERON:0004535,1.16e-26,23;UBERON:0001009,1.16e-26,23;UBERON:0004872,5.17e-18,33;UBERON:0003103,8.53e-16,43;UBERON:0003081,2.33e-12,87;UBERON:0003914,4.54e-12,47;UBERON:0000926,3.39e-08,120;UBERON:0004120,3.39e-08,120;UBERON:0006603,3.39e-08,120 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,0,2.05050407482854,2.4680598049033,3.39511721438424,0.255129870453209,0.0992909512008853,0.261199789138935,0.639969691173627,0.68822784320151,0,0,0.430942465371778,0,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0.388859798148567,0,0,2.18117387875057,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.383062014255563,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0.186399445825301,0.227178579999552,0.226714680320357,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0,1.29468941823586,0.148442139064825,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0.884610551949874,0.970601099684455,1.10420759230197,0,0,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0,0,0,0.125654352112864,0.869121600961382,0.511430914660661,0,0.811206315338788,0.203678727700633,0.248813941220186,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.374806898238915,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.703578179943289,0.720248245844059,1.18372367792605,1.37734962223183,1.3884040159864,1.39520366850245,3.75582761959467,3.61972561338225,2.46839774870221,2.46251196118643,3.4859588104718,4.23979963533464,3.73235195994786,3.35516046900929,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.0632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0,0,0.488660878060728,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0.164549020602121,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0.512612642393558,0,0.370389054739423,0,0.410082683163076,0,0,0,0.138199973804424,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0,0,0,1.81384306892169,0,0,0,0.19318959403219,0,0,0,0,0,0.920650473014354,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0,0.906284817968409,0,0,0,0,0.486213434136588,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.114870937911227,0.952587382566147,0.231768651889711,0.77163688185482,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.543216455383447,0,0.355905054372522,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0.214871054048298,0.57386499620653,0.220591419119515,0 | |||
|short_description=p3@Gm6334,p3@Pkig | |||
}} |
Revision as of 11:29, 4 August 2015
Short description: | p3@Gm6334, p3@Pkig |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm6334_5end, CAGE_peak_3_at_Pkig_5end |
Coexpression cluster: | MCL_coexpression_mm9:3329 |
Association with transcript: | 35bp_to_ENSMUST00000131228_5end |
EntrezGene: | 18769,622568 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.79e-12 | 6 |
megakaryocyte | 4.79e-12 | 6 |
megakaryocyte-erythroid progenitor cell | 4.41e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.40e-34 | 18 |
heart | 1.40e-34 | 18 |
primitive heart tube | 1.40e-34 | 18 |
primary heart field | 1.40e-34 | 18 |
anterior lateral plate mesoderm | 1.40e-34 | 18 |
heart tube | 1.40e-34 | 18 |
heart primordium | 1.40e-34 | 18 |
cardiac mesoderm | 1.40e-34 | 18 |
cardiogenic plate | 1.40e-34 | 18 |
heart rudiment | 1.40e-34 | 18 |
cardiovascular system | 1.16e-26 | 23 |
circulatory system | 1.16e-26 | 23 |
splanchnic layer of lateral plate mesoderm | 5.17e-18 | 33 |
compound organ | 8.53e-16 | 43 |
lateral plate mesoderm | 2.33e-12 | 87 |
epithelial tube | 4.54e-12 | 47 |
mesoderm | 3.39e-08 | 120 |
mesoderm-derived structure | 3.39e-08 | 120 |
presumptive mesoderm | 3.39e-08 | 120 |