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FFCP PHASE1:Mm9::chr4:109149213..109149270,-: Difference between revisions

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{{FFCP|EntrezGene=29864|HGNC=|MCL_coexpression_id=1|UniProt=Q9QYK7|association_with_transcript=9bp_to_ENSMUST00000030284_5end|description=CAGE_peak_1_at_Rnf11_5end|id=chr4:109149213..109149270,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!1.12e-16!122;UBERON:0000025!6.09e-15!114;UBERON:0004121!1.72e-10!102;UBERON:0000924!1.72e-10!102;UBERON:0006601!1.72e-10!102;UBERON:0000033!1.52e-09!63;UBERON:0000955!2.65e-09!50;UBERON:0006238!2.65e-09!50;UBERON:0001049!4.67e-09!52;UBERON:0005068!4.67e-09!52;UBERON:0006241!4.67e-09!52;UBERON:0007135!4.67e-09!52;UBERON:0002616!6.90e-09!49;UBERON:0000475!1.34e-08!200;UBERON:0002346!4.21e-08!71;UBERON:0003075!4.21e-08!71;UBERON:0007284!4.21e-08!71;UBERON:0001017!1.00e-07!73;UBERON:0005743!1.00e-07!73;UBERON:0000073!2.48e-07!75;UBERON:0001016!2.48e-07!75;UBERON:0002021!3.49e-07!10;UBERON:0000411!3.49e-07!10;UBERON:0001950!3.49e-07!10;UBERON:0005256!5.29e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.12e-16,122;UBERON:0000025,6.09e-15,114;UBERON:0000073,3.69e-10,54;UBERON:0010314,4.61e-10,92;UBERON:0004121,3.18e-09,95;UBERON:0000924,3.18e-09,95;UBERON:0006601,3.18e-09,95;UBERON:0001049,4.67e-09,52;UBERON:0005068,4.67e-09,52;UBERON:0006241,4.67e-09,52;UBERON:0007135,4.67e-09,52;UBERON:0010371,8.11e-09,73;UBERON:0000955,8.58e-08,47;UBERON:0006238,8.58e-08,47;UBERON:0001017,1.00e-07,73;UBERON:0002616,2.11e-07,46;UBERON:0001016,2.48e-07,75;UBERON:0002021,3.49e-07,10;UBERON:0000411,3.49e-07,10;UBERON:0001950,3.49e-07,10;UBERON:0002346,5.77e-07,64;UBERON:0003075,5.77e-07,64;UBERON:0007284,5.77e-07,64|phase1_expression=51.4077799206389,35.9444669868542,42.7699285026164,19.3577095236371,27.5492651470491,26.5249249620786,17.7545606852599,7.10178278928669,17.1762241025033,14.2779361056416,6.8487187290202,5.34473465268754,3.42401459862411,2.53519167015092,21.3190247562024,33.2059438519315,25.1842276126133,6.30924330716475,8.08975158273859,10.1853516431527,33.8472294801258,7.84398514486994,6.00759515019551,18.5591210440352,19.2703796096423,41.9189333803965,37.9070556619986,34.4753972297422,6.27077284206034,8.56902441183765,15.9645967671819,10.1604907753541,5.53558308826113,47.5445043046316,7.79899373328441,9.14290549471708,8.98345167554424,57.3388334109564,33.5974198145234,26.6997109426637,88.8229546926832,88.7959130445979,54.3771595394892,20.8988717839458,20.5795170375615,15.9685674380663,19.559783608701,15.6978112593922,35.1497892375155,27.9979054666968,13.0187372111587,11.5002051491977,7.3824346665404,7.25362142011344,9.41062637598899,48.364773974758,34.6705462325896,43.3164557513052,38.4401275633236,40.2033144246745,27.2547503507657,18.9752937958714,17.7858959222228,15.2982951937838,17.7995945262055,18.4724829885986,37.4500138148006,30.3532461204028,24.8855069540346,18.765825428105,18.2982716375702,49.7032712862618,51.2415015007743,17.8836566853833,15.7186572469908,16.5459381589804,78.182275509566,83.6352064457979,77.4176927611467,31.6527090552465,26.2569537138916,30.2129754922921,70.9124817463508,59.6528366633581,67.8424220129037,48.9083451886288,40.5759290277443,33.5519002485541,19.0072745266292,25.014186395346,34.7837386442013,42.1607699720879,75.4768180415603,46.9541776724901,36.3874793770695,31.8099089839108,40.728881838208,29.9957367737382,36.3700406444016,26.5004680882755,36.6192891419369,14.115912515575,15.2883143823987,7.11066703153331,24.8964697162896,24.0691872201344,27.8038444758131,39.8501740219519,4.40194402200192,55.8142442883741,18.3894446372104,32.273340701087,40.1270965225542,50.7935298662338,45.0364748329749,51.6489690364966,37.5736350956248,36.005239873058,58.3842964286917,32.8386705393241,41.0765224336332,34.4261429726008,26.0948465705371,52.4077626650669,58.435631200954,15.5828803677241,8.14742846640258,4.79922184794726,9.14905634926066,77.741341851103,68.1675898199753,28.0209205211688,83.9571466528695,88.4775482362944,84.7775221803005,66.6811591208484,27.2929495118848,36.9488702711976,43.468314450592,48.1911849980025,14.8337304977482,22.0706020256134,21.7875177064473,23.6606564002073,27.0785266622285,28.953700784376,30.1719553082327,38.8055056108524,14.0119195406347,12.1027891307404,16.1875034230833,20.8235945806196,22.5218271872734,43.5315208152708,49.7992770107223,16.1217756122979,4.21327912387941,4.37491442095016,6.81992398549422,19.6769483908727,20.1692411583743,24.668502420159,29.1196024769809,24.0052362731833,27.3052789810659,29.9968788728026,26.0225199357631,25.5716099784101,31.1018116336478,46.623559798463,50.6680059661598,53.5091953976716,48.5205754793222,51.9378840602639,62.4561147235458,27.9900545671654,20.1555457620117,9.25576983322405,13.8637362847902,13.4697269679054,14.6908905907186,13.5127961497639,20.0140239460383,22.6368495073945,21.8283368310475,24.0460473897056,29.1548842208313,27.2570366696377,26.7100799353195,8.08937467788799,18.371734239349,19.1175622324193,20.6738012038859,15.0808036644842,9.01661885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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:29864
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:Q9QYK7
|association_with_transcript=9bp_to_ENSMUST00000030284_5end
|cluster_id=chr4:109149213..109149270,-
|description=CAGE_peak_1_at_Rnf11_5end
|id=chr4:109149213..109149270,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.12e-16,122;UBERON:0000025,6.09e-15,114;UBERON:0000073,3.69e-10,54;UBERON:0010314,4.61e-10,92;UBERON:0004121,3.18e-09,95;UBERON:0000924,3.18e-09,95;UBERON:0006601,3.18e-09,95;UBERON:0001049,4.67e-09,52;UBERON:0005068,4.67e-09,52;UBERON:0006241,4.67e-09,52;UBERON:0007135,4.67e-09,52;UBERON:0010371,8.11e-09,73;UBERON:0000955,8.58e-08,47;UBERON:0006238,8.58e-08,47;UBERON:0001017,1.00e-07,73;UBERON:0002616,2.11e-07,46;UBERON:0001016,2.48e-07,75;UBERON:0002021,3.49e-07,10;UBERON:0000411,3.49e-07,10;UBERON:0001950,3.49e-07,10;UBERON:0002346,5.77e-07,64;UBERON:0003075,5.77e-07,64;UBERON:0007284,5.77e-07,64
|phase1_expression=51.4077799206389,35.9444669868542,42.7699285026164,19.3577095236371,27.5492651470491,26.5249249620786,17.7545606852599,7.10178278928669,17.1762241025033,14.2779361056416,6.8487187290202,5.34473465268754,3.42401459862411,2.53519167015092,21.3190247562024,33.2059438519315,25.1842276126133,6.30924330716475,8.08975158273859,10.1853516431527,33.8472294801258,7.84398514486994,6.00759515019551,18.5591210440352,19.2703796096423,41.9189333803965,37.9070556619986,34.4753972297422,6.27077284206034,8.56902441183765,15.9645967671819,10.1604907753541,5.53558308826113,47.5445043046316,7.79899373328441,9.14290549471708,8.98345167554424,57.3388334109564,33.5974198145234,26.6997109426637,88.8229546926832,88.7959130445979,54.3771595394892,20.8988717839458,20.5795170375615,15.9685674380663,19.559783608701,15.6978112593922,35.1497892375155,27.9979054666968,13.0187372111587,11.5002051491977,7.3824346665404,7.25362142011344,9.41062637598899,48.364773974758,34.6705462325896,43.3164557513052,38.4401275633236,40.2033144246745,27.2547503507657,18.9752937958714,17.7858959222228,15.2982951937838,17.7995945262055,18.4724829885986,37.4500138148006,30.3532461204028,24.8855069540346,18.765825428105,18.2982716375702,49.7032712862618,51.2415015007743,17.8836566853833,15.7186572469908,16.5459381589804,78.182275509566,83.6352064457979,77.4176927611467,31.6527090552465,26.2569537138916,30.2129754922921,70.9124817463508,59.6528366633581,67.8424220129037,48.9083451886288,40.5759290277443,33.5519002485541,19.0072745266292,25.014186395346,34.7837386442013,42.1607699720879,75.4768180415603,46.9541776724901,36.3874793770695,31.8099089839108,40.728881838208,29.9957367737382,36.3700406444016,26.5004680882755,36.6192891419369,14.115912515575,15.2883143823987,7.11066703153331,24.8964697162896,24.0691872201344,27.8038444758131,39.8501740219519,4.40194402200192,55.8142442883741,18.3894446372104,32.273340701087,40.1270965225542,50.7935298662338,45.0364748329749,51.6489690364966,37.5736350956248,36.005239873058,58.3842964286917,32.8386705393241,41.0765224336332,34.4261429726008,26.0948465705371,52.4077626650669,58.435631200954,15.5828803677241,8.14742846640258,4.79922184794726,9.14905634926066,77.741341851103,68.1675898199753,28.0209205211688,83.9571466528695,88.4775482362944,84.7775221803005,66.6811591208484,27.2929495118848,36.9488702711976,43.468314450592,48.1911849980025,14.8337304977482,22.0706020256134,21.7875177064473,23.6606564002073,27.0785266622285,28.953700784376,30.1719553082327,38.8055056108524,14.0119195406347,12.1027891307404,16.1875034230833,20.8235945806196,22.5218271872734,43.5315208152708,49.7992770107223,16.1217756122979,4.21327912387941,4.37491442095016,6.81992398549422,19.6769483908727,20.1692411583743,24.668502420159,29.1196024769809,24.0052362731833,27.3052789810659,29.9968788728026,26.0225199357631,25.5716099784101,31.1018116336478,46.623559798463,50.6680059661598,53.5091953976716,48.5205754793222,51.9378840602639,62.4561147235458,27.9900545671654,20.1555457620117,9.25576983322405,13.8637362847902,13.4697269679054,14.6908905907186,13.5127961497639,20.0140239460383,22.6368495073945,21.8283368310475,24.0460473897056,29.1548842208313,27.2570366696377,26.7100799353195,8.08937467788799,18.371734239349,19.1175622324193,20.6738012038859,15.0808036644842,9.01661885384643,23.2162513743658,20.1710586654331,20.479659407973,31.4285589507559,40.445180546411,38.1506908654541,36.7723548486966,43.2820835547237,25.5273011745624,36.5599730910558,35.9779379815766,47.0635481621327,52.3354436662745,53.980680577661,35.3866249064497,41.8308885079591,32.9473695825698,96.3246983733275,45.4011956155574,41.188972851122,35.6136217905428,40.0056232153864,51.6214567858803,32.8860678496556,17.6227012946551,18.578007314391,19.6904299499218,17.6017686216377,24.7909261013887,30.2315423925237,38.0510613322708,46.187097223114,46.7290495158915,50.7066164330809,42.2767351966604,46.27957514006,43.250068515872,9.04747703635634,6.52686820582452,30.9811492001993,21.2471294654644,76.2615302442012,60.7156536547612,47.5411341592359,65.3899701459326,17.3529520678941,16.0079885161622,18.3109888072879,18.6395662402991,18.7150886229211,20.0984336860071,22.2645885921192,19.5811424800579,26.4842811224171,56.8738730066598,30.9429385754026,18.6968883850618,22.6412873501471,27.5500105364134,35.84118735179,11.1679092631291,15.7208249621671,16.7858520982749,17.4228116799656,24.9022469834581,29.4608254211772,26.5379622518579,19.250858432775,31.2876390356458,65.3595373164992,50.5364161916116,50.0446220458068,20.3469036255381,22.120334926851,25.5061071687595,37.596129532162,32.819862438781,38.5044708208963,28.3152402676577,72.5135577916865,41.5190858893088,19.1859706307817,53.588032205981,51.345687689298,47.4662719184587,54.5531612094334,51.8685243194394,15.1570035047522,62.1174761735207,26.9975991660607,16.5109494370578,22.5937323391048,53.8733787033416,34.1735569302563,55.135539742772,16.9978429993855,15.1147568509551,17.8277966207707,37.2321541025894,14.2351197111511,16.2655573701479,17.8208812355972,24.2542423376784,33.6278348169114,31.6931214004329,36.9460947092252,36.1223199937961,22.6826203260638,59.0272347432579,29.3120328115779,13.90503878209,17.5385999884523,16.3338998209,17.1782565225382,19.4299544314395,16.195298933114,23.0461761173792,18.6649633077765,12.8039584037783,24.7705805381764,10.1123558601017,11.7580624868295,10.3738066736476,7.01572444080093,6.80301443536429,10.530111803407,6.61074972359829,8.71368210330006,5.95702054694071,7.77309427880998,6.35204966362095,8.67375138583797,5.00301576529713,6.778860326531,58.2697085891093,7.32553646134413,4.84454825691169,10.9125000636651,37.4787812422449,32.8444332039568,22.8939530334081,60.6662512793756,23.5738888896621,62.6874545304944,65.8265088205263,61.2998199380154,54.3056056206053,72.6187470956881,91.4026615841538,82.3527450282803,63.4952896546151,67.9713613476307,78.1818070745248,15.6718894852107,19.9512436700516,21.683167930775,32.8194068042197,29.5554559305455,45.4093465871535,28.2253344308051,30.0811183568786,31.7710017495897,32.5979403175299,28.3896815877069,32.066478035633,29.7779993754226,30.9881737639567,30.153621201697,27.6250340944183,30.2458090716073,33.5662043606847,32.5547861634612,26.2014077839227,19.2006781335833,22.3619515760765,29.0892151735732,21.3659232449523,23.903782625494,25.638226191178,23.9635644463332,23.6762740294059,27.2966268830182,24.6902599529405,30.4891996579128,31.4229298778047,21.2800142448238,25.5645787956844,42.8252676378134,37.4715866906919,37.6629889597108,44.693179242046,29.4584031386019,43.8976924047836,53.0977343570765
|short_description=p1@Rnf11
}}

Revision as of 13:09, 4 August 2015

Short description:p1@Rnf11
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rnf11_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 9bp_to_ENSMUST00000030284_5end
EntrezGene:29864
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Rnf11

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G751.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I535.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I642.77
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.36
CD326+ enterocyte, pool2.CNhs13197.11849-124I427.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I726.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E717.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.34
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A121.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A333.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.18
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.09
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A333.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D118.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.27
GP2+ M cell, pool1.CNhs13228.11845-124H941.92
GP2+ M cell, pool2.CNhs13231.11846-124I137.91
GP2+ M cell, pool3.CNhs13240.11847-124I234.48
Ileum epithelium, pool1.CNhs13199.10252-104B96.27
Ileum epithelium, pool2.CNhs13232.10253-104C18.57
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G857.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H133.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H326.70
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G988.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H288.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H454.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D820.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.58
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B719.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.70
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B835.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C328.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C148.36
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E134.67
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C543.32
Mouse Granule cells, donor1.CNhs12131.11713-123C338.44
Mouse Granule cells, donor2.CNhs12357.11731-123E340.20
Mouse Granule cells, donor3.CNhs12108.11636-122C727.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C618.98
Mouse Meningeal cells, donor3.CNhs12109.11639-122D117.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E717.80
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D218.47
Mouse Microglia, donor1.CNhs12629.11718-123C837.45
Mouse Microglia, donor2.CNhs12634.11736-123E830.35
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.89
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.77
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F149.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D551.24
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D378.18
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F383.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D777.42
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D431.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F426.26
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E470.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E559.65
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I667.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D648.91
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F640.58
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E133.55
Mouse Schwann, donor1.CNhs12507.11728-123D919.01
Mouse Schwann, donor2.CNhs12573.11746-123F925.01
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G334.78
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F742.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C475.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C846.95
Mouse hepatocyte, donor6.CNhs13090.11822-124F436.39
Mouse hepatocyte, donor8.CNhs13091.11824-124F631.81
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A740.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I730.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E336.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I826.50
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G636.62
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G124.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G224.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G327.80
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B639.85
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D755.81
adrenal gland, embryo E14.CNhs11038.406-44C518.39
adrenal gland, embryo E16.CNhs11004.1254-43D632.27
adrenal gland, embryo E17.CNhs11043.1263-45I140.13
adrenal gland, embryo E18.CNhs11026.1262-18F550.79
adrenal gland, neonate N00.CNhs11191.1311-23C145.04
adrenal gland, neonate N25.CNhs11223.1377-27I351.65
amnion, adult pregnant day17.5.CNhs10488.583-22A837.57
aorta, adult.CNhs10498.46-23H136.01
bone (os femoris), adult.CNhs10483.56-12G258.38
bone (os femoris), neonate N02.CNhs11227.1985-43F532.84
bone (os femoris), neonate N16.CNhs11225.1525-43A641.08
bone (os femoris), neonate N20.CNhs11195.1350-25C334.43
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B252.41
cerebellum, neonate N30.CNhs11135.1395-42I258.44
colon, adult.CNhs10468.36-18H715.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.15
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.15
corpora quadrigemina, adult.CNhs10501.16-22A477.74
corpus striatum, adult.CNhs10487.19-21D868.17
corpus striatum, neonate N00.CNhs11226.630-43F128.02
cortex, adult.CNhs10473.12-14D583.96
cortex, neonate N30.CNhs11107.1392-42F288.48
diencephalon, adult.CNhs10482.20-12F284.78
diencephalon, neonate N30.CNhs11201.1388-42B266.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B127.29
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A236.95
epididymis, adult.CNhs10490.58-23B243.47
eyeball, adult.CNhs10484.31-12G448.19
eyeball, embryo E12.CNhs11016.345-16C614.83
eyeball, embryo E14.CNhs10521.399-16E222.07
eyeball, embryo E15.CNhs10593.426-16C921.79
eyeball, embryo E17.CNhs11023.1261-18D423.66
eyeball, neonate N00.CNhs11207.633-15C627.08
eyeball, neonate N01.CNhs11140.1532-43E728.95
eyeball, neonate N02.CNhs11205.1551-44G830.17
eyeball, neonate N16.CNhs11188.777-19A238.81
forelimb, embryo E11.CNhs10596.335-25E214.01
forelimb, embryo E12.CNhs10600.359-14H212.10
forelimb, embryo E13.CNhs10589.384-1E216.19
forelimb, embryo E14.CNhs10577.413-26A820.82
forelimb, embryo E15.CNhs11007.437-20E722.52
forelimb, embryo E17.CNhs10598.1517-43C443.53
forelimb, embryo E18.CNhs11008.1520-43B549.80
gonad, embryo E13.CNhs11044.1564-45I616.12
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E919.68
heart, embryo E12.CNhs11015.353-12F520.17
heart, embryo E13.CNhs11013.376-3I924.67
heart, embryo E14.CNhs10597.403-26D429.12
heart, embryo E15.CNhs11017.431-16C824.01
heart, embryo E16.CNhs11021.457-17C627.31
heart, embryo E17.CNhs11025.479-18E530.00
heart, embryo E18.CNhs11030.1283-20G326.02
heart, neonate N00.CNhs11213.639-21E325.57
heart, neonate N03.CNhs11221.1349-25I231.10
heart, neonate N10.CNhs11118.749-24G146.62
heart, neonate N16.CNhs11209.782-15G150.67
heart, neonate N20.CNhs11127.821-26I653.51
heart, neonate N25.CNhs11196.1351-25D348.52
heart, neonate N30.CNhs11202.1390-42D251.94
hippocampus, adult.CNhs10478.13-16E862.46
hippocampus, neonate N00.CNhs11228.627-43G127.99
intestinal mucosa, adult.CNhs10506.860-29I320.16
intestine, adult.CNhs10496.178-9A39.26
intestine, embryo E12.CNhs11019.1251-16I513.86
intestine, embryo E13.CNhs11010.381-16D513.47
intestine, embryo E15.CNhs10602.976-16D814.69
intestine, embryo E16.CNhs10585.463-22H413.51
intestine, embryo E17.CNhs10582.482-18D320.01
intestine, embryo E18.CNhs10526.1289-20F722.64
intestine, neonate N00.CNhs11126.644-26D121.83
intestine, neonate N01.CNhs11192.1322-23E924.05
intestine, neonate N06.CNhs11102.688-20B829.15
intestine, neonate N07.CNhs11095.720-20F227.26
intestine, neonate N10.CNhs11098.755-23A526.71
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E318.37
intestine, neonate N30.CNhs11131.1384-42G119.12
kidney, embryo E14.CNhs10606.411-4I920.67
kidney, embryo E15.CNhs10997.434-16F815.08
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I223.22
kidney, embryo E18.CNhs11001.1288-20C720.17
kidney, neonate N00.CNhs11214.646-21G720.48
kidney, neonate N10.CNhs11206.758-6D531.43
kidney, neonate N20.CNhs11113.832-19I140.45
kidney, neonate N25.CNhs11122.1353-25F338.15
kidney, neonate N30.CNhs11203.1385-42H136.77
liver, adult pregnant day01.CNhs10466.508-5B243.28
liver, embryo E12.CNhs10601.355-15F825.53
liver, embryo E13.CNhs10524.378-3H636.56
liver, embryo E14.CNhs10594.409-16E135.98
liver, embryo E15.CNhs10520.433-16D747.06
liver, embryo E16.CNhs10523.462-17F552.34
liver, embryo E17.CNhs10510.481-18A353.98
liver, embryo E18.CNhs10579.499-43G435.39
liver, neonate N00.CNhs11117.641-24F441.83
liver, neonate N03.CNhs11123.1345-25G232.95
liver, neonate N06.CNhs11101.684-20A896.32
liver, neonate N07.CNhs11103.716-20H245.40
liver, neonate N10.CNhs11115.751-24B941.19
liver, neonate N20.CNhs11220.823-25A335.61
liver, neonate N25.CNhs11198.1368-26H140.01
liver, neonate N30.CNhs11106.1382-42D151.62
lung, adult.CNhs10474.28-22B132.89
lung, embryo E12.CNhs10522.354-16G217.62
lung, embryo E14.CNhs10604.404-26F818.58
lung, embryo E15.CNhs11020.432-17C519.69
lung, embryo E16.CNhs10998.458-17B617.60
lung, embryo E17.CNhs10605.480-44A624.79
lung, embryo E18.CNhs10583.1287-20I630.23
lung, neonate N00.CNhs11224.640-42C638.05
lung, neonate N06.CNhs11212.683-20E546.19
lung, neonate N07.CNhs11111.715-19A346.73
lung, neonate N10.CNhs11219.750-23E650.71
lung, neonate N20.CNhs11109.822-18A442.28
lung, neonate N25.CNhs11119.1359-25C746.28
lung, neonate N30.CNhs11133.1394-42H243.25
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B630.98
mammary gland, adult pregnant day19.CNhs10476.588-5H221.25
medulla oblongata, adult.CNhs10477.17-12C276.26
medulla oblongata, neonate N30.CNhs11200.1396-42A360.72
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C747.54
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C265.39
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.35
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.01
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.64
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.72
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D422.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D626.48
olfactory brain, adult.CNhs10489.18-22I956.87
ovary, adult.CNhs10507.91-2I730.94
ovary, embryo E18.CNhs11040.505-44H718.70
ovary, neonate N00.CNhs11217.1299-22I422.64
oviduct, adult pregnant day01.CNhs10500.988-6G627.55
pancreas, adult.CNhs10486.34-16E435.84
pancreas, embryo E14.CNhs11012.405-44F411.17
pancreas, embryo E15.CNhs11042.1556-45F215.72
pancreas, embryo E16.CNhs11003.460-26E516.79
pancreas, embryo E17.CNhs10599.1558-45G317.42
pancreas, embryo E18.CNhs10580.1535-43I724.90
pancreas, neonate N00.CNhs11105.645-26G929.46
pancreas, neonate N01.CNhs11138.1531-43D726.54
pancreas, neonate N02.CNhs11139.1539-43D819.25
pancreas, neonate N16.CNhs11136.787-43B631.29
pancreas, neonate N25.CNhs11094.1555-45E265.36
pancreas, neonate N30.CNhs11182.1548-44H550.54
pituitary gland, adult.CNhs10493.21-1G850.04
pituitary gland, embryo E12.CNhs11018.346-16E620.35
pituitary gland, embryo E13.CNhs11009.370-44C722.12
pituitary gland, embryo E14.CNhs11037.398-44A525.51
pituitary gland, embryo E15.CNhs10592.427-16B937.60
pituitary gland, embryo E16.CNhs11036.449-43F632.82
pituitary gland, embryo E17.CNhs11039.1265-44F538.50
pituitary gland, neonate N00.CNhs11190.1308-22E928.32
placenta, adult pregnant day10.CNhs10472.539-13I772.51
placenta, adult pregnant day17.CNhs10464.577-18G341.52
prostate, adult.CNhs10470.859-1F819.19
skin, adult.CNhs10492.30-1C353.59
skin, neonate N00.CNhs11124.650-25G451.35
skin, neonate N03.CNhs11215.662-22H347.47
skin, neonate N06.CNhs11097.693-20I554.55
skin, neonate N10.CNhs11108.762-6C451.87
small intestine, neonate N16.CNhs11114.790-21I115.16
spinal cord, adult.CNhs10505.24-13C962.12
spleen, adult.CNhs10465.25-2G227.00
spleen, embryo E16.CNhs11035.461-43C116.51
spleen, embryo E18.CNhs11011.1271-21F222.59
spleen, neonate N10.CNhs11116.752-24D153.87
spleen, neonate N20.CNhs11112.824-19H134.17
spleen, neonate N25.CNhs11099.1354-25G355.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C915.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.83
stomach, adult.CNhs10503.33-1H637.23
stomach, embryo E12.CNhs10588.356-43E314.24
stomach, embryo E15.CNhs10603.1252-16G816.27
stomach, embryo E16.CNhs11022.459-17D417.82
stomach, embryo E17.CNhs11006.1035-18D524.25
stomach, embryo E18.CNhs10999.1286-20C633.63
stomach, neonate N03.CNhs11193.1340-24B831.69
stomach, neonate N07.CNhs11210.718-18A936.95
stomach, neonate N25.CNhs11104.1355-25E436.12
stomach, neonate N30.CNhs11134.1386-42I122.68
submandibular gland, adult.CNhs10469.59-29C159.03
testis, adult.CNhs10504.57-7G529.31
testis, embryo E13.CNhs11031.389-23F513.91
testis, embryo E15.CNhs11034.443-27C517.54
testis, embryo E16.CNhs11033.470-26G516.33
testis, embryo E17.CNhs11029.486-18I517.18
testis, embryo E18.CNhs11027.503-18G519.43
testis, neonate N00.CNhs11189.1300-22B716.20
testis, neonate N07.CNhs11222.726-26I423.05
testis, neonate N10.CNhs11204.763-44D918.66
testis, neonate N20.CNhs11110.839-18H312.80
testis, neonate N30.CNhs11130.1391-42E224.77
thymus, adult.CNhs10471.38-12B510.11
thymus, embryo E14.CNhs11041.402-44I411.76
thymus, embryo E15.CNhs11005.430-45I210.37
thymus, embryo E16.CNhs11002.456-26C57.02
thymus, embryo E17.CNhs10581.478-18C16.80
thymus, embryo E18.CNhs10595.1273-19G410.53
thymus, neonate N02.CNhs11181.1541-43F86.61
thymus, neonate N03.CNhs11137.2104-43C78.71
thymus, neonate N06.CNhs11197.681-26C45.96
thymus, neonate N07.CNhs11211.713-19D37.77
thymus, neonate N10.CNhs11194.748-24E46.35
thymus, neonate N20.CNhs11186.820-7A28.67
thymus, neonate N25.CNhs11125.1362-25G75.00
thymus, neonate N30.CNhs11132.1393-42G26.78
tongue, adult.CNhs10499.32-1B458.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.84
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.91
urinary bladder, adult.CNhs10481.879-12E437.48
uterus, adult pregnant day19.CNhs10497.590-15F532.84
uterus, adult.CNhs10509.92-27E522.89
vagina, adult.CNhs10502.89-27D560.67
vesicular gland, adult.CNhs10491.51-27F823.57
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A162.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A265.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A361.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D754.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A472.62
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A591.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A682.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A763.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A867.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A978.18
whole body, embryo E11.CNhs11014.324-5I815.67
whole body, embryo E12.CNhs10587.857-27C919.95
whole body, embryo E13.CNhs10512.372-23H221.68
whole body, embryo E14.5.CNhs10578.420-27D232.82
whole body, embryo E14.CNhs10519.395-14B129.56
whole body, embryo E16.CNhs10514.453-14F245.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G528.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G530.08
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G531.77
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G532.60
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G528.39
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G532.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G529.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G530.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G527.63
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.25
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G533.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G532.55
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G526.20
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G529.09
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.37
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.90
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G525.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G523.96
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G523.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G530.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G531.42
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G525.56
whole body, embryo E17.5.CNhs10513.490-9F942.83
whole body, embryo E17.CNhs10517.475-3I537.47
whole body, embryo E18.CNhs10516.493-3B337.66
whole body, neonate N00.CNhs10525.657-19C244.69
whole body, neonate N01.CNhs10576.659-23C629.46
whole body, neonate N06.CNhs10515.692-21D143.90
whole body, neonate N10.CNhs10518.761-6B453.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anatomical conduit1.12e-16122
tube6.09e-15114
regional part of nervous system3.69e-1054
structure with developmental contribution from neural crest4.61e-1092
ectoderm-derived structure3.18e-0995
ectoderm3.18e-0995
presumptive ectoderm3.18e-0995
neural tube4.67e-0952
neural rod4.67e-0952
future spinal cord4.67e-0952
neural keel4.67e-0952
ecto-epithelium8.11e-0973
brain8.58e-0847
future brain8.58e-0847
central nervous system1.00e-0773
regional part of brain2.11e-0746
nervous system2.48e-0775
occipital lobe3.49e-0710
visual cortex3.49e-0710
neocortex3.49e-0710
neurectoderm5.77e-0764
neural plate5.77e-0764
presumptive neural plate5.77e-0764
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