FFCP PHASE1:Mm9::chr9:109834313..109834339,+: Difference between revisions
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{{FFCP|EntrezGene=17758|HGNC=|MCL_coexpression_id=2488|UniProt=Q78TF3|association_with_transcript=0bp_to_ENSMUST00000169851_5end|description=CAGE_peak_1_at_Mtap4_5end|id=chr9:109834313..109834339,+|ontology_enrichment_celltype=CL:0002319!5.43e-08!43;CL:0000221!7.15e-08!44;CL:0000133!7.15e-08!44;CL:0000055!6.94e-07!50|ontology_enrichment_celltype_v019_2=CL:0002319,5.43e-08,43;CL:0000221,7.15e-08,44;CL:0000133,7.15e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.11e-13!102;UBERON:0000924!4.11e-13!102;UBERON:0006601!4.11e-13!102;UBERON:0000073!8.67e-13!75;UBERON:0001016!8.67e-13!75;UBERON:0001017!3.80e-12!73;UBERON:0005743!3.80e-12!73;UBERON:0001049!1.40e-08!52;UBERON:0005068!1.40e-08!52;UBERON:0006241!1.40e-08!52;UBERON:0007135!1.40e-08!52;UBERON:0000955!2.45e-08!50;UBERON:0006238!2.45e-08!50;UBERON:0002616!3.09e-08!49;UBERON:0000033!5.81e-08!63;UBERON:0002346!9.65e-08!71;UBERON:0003075!9.65e-08!71;UBERON:0007284!9.65e-08!71;UBERON:0000468!1.60e-07!333;UBERON:0002020!4.12e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.52e-14,95;UBERON:0000924,1.52e-14,95;UBERON:0006601,1.52e-14,95;UBERON:0001016,8.67e-13,75;UBERON:0010314,1.47e-12,92;UBERON:0001017,3.80e-12,73;UBERON:0000073,1.38e-09,54;UBERON:0010371,1.63e-09,73;UBERON:0002346,4.87e-09,64;UBERON:0003075,4.87e-09,64;UBERON:0007284,4.87e-09,64;UBERON:0001049,1.40e-08,52;UBERON:0005068,1.40e-08,52;UBERON:0006241,1.40e-08,52;UBERON:0007135,1.40e-08,52;UBERON:0002020,4.12e-07,34;UBERON:0000955,7.00e-07,47;UBERON:0006238,7.00e-07,47;UBERON:0002616,8.79e-07,46|phase1_expression=27.3854528549198,36.2934423944936,35.9449399117733,33.875991666365,34.561805366298,17.4594442788365,15.6520469199002,22.0800883085095,28.0169557081817,27.6196141059952,10.1018601253048,15.8746596400719,25.6801094896809,19.0576477273414,6.32908547449759,7.08663435864391,3.49780939064073,22.7132759057931,21.3898516424952,22.9170411970936,57.0640476913678,8.93618560807968,5.48519557191764,23.198901305044,17.8939239232393,22.9692785646008,26.7072437618626,21.5471232685889,17.4821545899864,23.9428623271934,14.6342137032501,2.54012269383853,3.07532393792285,0,7.79899373328441,8.97667084935859,8.98345167554424,36.412251874111,22.6587249911902,29.3173296625327,42.352667138233,38.9335926426314,41.2683800076481,40.0351881162336,36.7998260326838,47.7221555620372,66.5032642695833,57.3406161280574,85.677611266444,89.0488937760218,103.449965581143,63.2511283205875,16.6104779997159,22.4862264023517,30.2484419228218,61.7422646486273,70.7737596648729,44.34779993586,69.5968625357016,74.5877280773566,56.4109949120499,79.9673095683152,84.4830056305582,19.7977937801908,18.7884608887725,24.1563239081674,43.4420160251687,54.9432176609823,42.3053618218589,47.5220902927551,41.854667308925,78.8396716954498,69.5735903997583,44.8316325126732,49.3604175743917,46.8801581171111,149.757598159169,139.945322541366,140.857190995975,79.2636589258465,88.0111131455181,68.2396515429356,136.520486511675,100.734507195671,124.683370185877,90.7456043258896,88.4128137762429,77.1693705716744,65.6546096198706,118.571777807546,54.7843883646171,11.185510400758,27.8788246820178,10.7940638327563,13.6453047664011,12.9927797258227,43.9591035012383,54.7081335475565,29.8753905293299,27.5604868118065,47.4642324647413,35.931413676009,122.30651505919,156.434674693733,20.9996309780878,26.6027858748854,18.704404465547,27.5183150122935,119.629302244993,36.5167662099469,39.7281398294451,43.5385633986362,39.8964810252981,30.8981413132876,54.9139262323741,30.9139814671002,103.327496512968,52.6341659188478,47.7689698052932,139.281257804719,77.2945314611377,58.1850303762267,18.6391761218122,108.328894894272,84.4070228458224,31.6766748458653,7.6681679683789,5.99902730993408,6.09937089950711,138.706132088866,119.407657335662,84.4397246198449,99.4275111499821,96.9161583281953,157.503337776147,122.816636142293,62.9367268594955,48.3943115673262,20.4705434331277,53.4522313951644,35.9132422577062,35.1750219783214,57.7999436675171,70.0777402936075,66.6757691683013,71.1031147580916,60.9061209638237,80.4567482998339,33.8441748904562,42.5488680377593,51.0258260075452,55.0181288393213,67.5654815618203,83.9287721318421,89.7210114738633,48.9624296373493,4.91549231119264,7.46308930632674,4.26245249093389,68.5586307092511,76.2209694938563,70.2242039697958,79.5462311566306,85.5924408101207,69.8830021379823,83.0146182758956,84.5061214408801,92.0110897853296,82.2799249567402,89.3071004590278,113.334195745106,93.275591977362,111.092358337272,113.136011014993,105.355264230628,102.390089317388,33.0418782983798,35.4363759329149,37.7520203447364,52.94996118418,58.8924298241966,50.4208811558356,43.1413405059048,33.0992589435853,23.2519240156811,30.139908714494,21.1121575392226,33.026774358831,29.244613067868,35.0539569375146,30.6916030822066,27.680636982357,37.3645764877571,44.671168430404,47.3372489826938,36.6572390121566,36.0751626131784,37.7330711009914,37.3727934404361,26.4222164883488,23.235811720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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17758 | |||
|HGNC= | |||
|MCL_coexpression_id=2488 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q78TF3 | |||
|association_with_transcript=0bp_to_ENSMUST00000169851_5end | |||
|cluster_id=chr9:109834313..109834339,+ | |||
|description=CAGE_peak_1_at_Mtap4_5end | |||
|id=chr9:109834313..109834339,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.43e-08!43;CL:0000221!7.15e-08!44;CL:0000133!7.15e-08!44;CL:0000055!6.94e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.43e-08,43;CL:0000221,7.15e-08,44;CL:0000133,7.15e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.11e-13!102;UBERON:0000924!4.11e-13!102;UBERON:0006601!4.11e-13!102;UBERON:0000073!8.67e-13!75;UBERON:0001016!8.67e-13!75;UBERON:0001017!3.80e-12!73;UBERON:0005743!3.80e-12!73;UBERON:0001049!1.40e-08!52;UBERON:0005068!1.40e-08!52;UBERON:0006241!1.40e-08!52;UBERON:0007135!1.40e-08!52;UBERON:0000955!2.45e-08!50;UBERON:0006238!2.45e-08!50;UBERON:0002616!3.09e-08!49;UBERON:0000033!5.81e-08!63;UBERON:0002346!9.65e-08!71;UBERON:0003075!9.65e-08!71;UBERON:0007284!9.65e-08!71;UBERON:0000468!1.60e-07!333;UBERON:0002020!4.12e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.52e-14,95;UBERON:0000924,1.52e-14,95;UBERON:0006601,1.52e-14,95;UBERON:0001016,8.67e-13,75;UBERON:0010314,1.47e-12,92;UBERON:0001017,3.80e-12,73;UBERON:0000073,1.38e-09,54;UBERON:0010371,1.63e-09,73;UBERON:0002346,4.87e-09,64;UBERON:0003075,4.87e-09,64;UBERON:0007284,4.87e-09,64;UBERON:0001049,1.40e-08,52;UBERON:0005068,1.40e-08,52;UBERON:0006241,1.40e-08,52;UBERON:0007135,1.40e-08,52;UBERON:0002020,4.12e-07,34;UBERON:0000955,7.00e-07,47;UBERON:0006238,7.00e-07,47;UBERON:0002616,8.79e-07,46 | |||
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| |||
|short_description=p1@Mtap4 | |||
}} |
Revision as of 14:36, 4 August 2015
Short description: | p1@Mtap4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mtap4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2488 |
Association with transcript: | 0bp_to_ENSMUST00000169851_5end |
EntrezGene: | 17758 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.43e-08 | 43 |
ectodermal cell | 7.15e-08 | 44 |
neurectodermal cell | 7.15e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.52e-14 | 95 |
ectoderm | 1.52e-14 | 95 |
presumptive ectoderm | 1.52e-14 | 95 |
nervous system | 8.67e-13 | 75 |
structure with developmental contribution from neural crest | 1.47e-12 | 92 |
central nervous system | 3.80e-12 | 73 |
regional part of nervous system | 1.38e-09 | 54 |
ecto-epithelium | 1.63e-09 | 73 |
neurectoderm | 4.87e-09 | 64 |
neural plate | 4.87e-09 | 64 |
presumptive neural plate | 4.87e-09 | 64 |
neural tube | 1.40e-08 | 52 |
neural rod | 1.40e-08 | 52 |
future spinal cord | 1.40e-08 | 52 |
neural keel | 1.40e-08 | 52 |
gray matter | 4.12e-07 | 34 |
brain | 7.00e-07 | 47 |
future brain | 7.00e-07 | 47 |
regional part of brain | 8.79e-07 | 46 |