FFCP PHASE1:Mm9::chr5:75440587..75440687,-: Difference between revisions
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{{FFCP|EntrezGene=74277|HGNC=|MCL_coexpression_id=0|UniProt=Q9D9G3|association_with_transcript=0bp_to_NM_028850,uc008xtw.1_5end|description=CAGE_peak_1_at_Chic2_5end|id=chr5:75440587..75440687,-|ontology_enrichment_celltype=CL:0002371!2.68e-07!118;CL:0000144!5.18e-07!121;CL:0000012!5.18e-07!121;CL:0000355!8.15e-07!9|ontology_enrichment_celltype_v019_2=CL:0000355,8.15e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002329!1.26e-07!11;UBERON:0003077!1.26e-07!11;UBERON:0003059!1.26e-07!11;UBERON:0007282!1.26e-07!11;UBERON:0009618!1.26e-07!11;UBERON:0007285!1.26e-07!11;UBERON:0003133!2.66e-07!24;UBERON:0000991!4.55e-07!18;UBERON:0005564!4.55e-07!18;UBERON:0004176!7.00e-07!17;UBERON:0009196!7.00e-07!17;UBERON:0009117!7.00e-07!17;UBERON:0001134!8.15e-07!9;UBERON:0002036!8.15e-07!9;UBERON:0002385!8.15e-07!9;UBERON:0000486!8.15e-07!9;UBERON:0001015!8.15e-07!9;UBERON:0004290!8.15e-07!9;UBERON:0003082!8.15e-07!9;UBERON:0000473!9.53e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.26e-07,11;UBERON:0003077,1.26e-07,11;UBERON:0007285,1.26e-07,11;UBERON:0003133,2.66e-07,24;UBERON:0000991,4.55e-07,18;UBERON:0005564,4.55e-07,18;UBERON:0004176,7.00e-07,17;UBERON:0009196,7.00e-07,17;UBERON:0009117,7.00e-07,17;UBERON:0001134,8.15e-07,9;UBERON:0002036,8.15e-07,9;UBERON:0002385,8.15e-07,9;UBERON:0000486,8.15e-07,9;UBERON:0007503,8.15e-07,9;UBERON:0001015,8.15e-07,9;UBERON:0002329,8.15e-07,9;UBERON:0003082,8.15e-07,9;UBERON:0003059,8.15e-07,9;UBERON:0007282,8.15e-07,9;UBERON:0004290,8.15e-07,9;UBERON:0009618,8.15e-07,9;UBERON:0000473,9.53e-07,14|phase1_expression=57.1731384164114,36.9913932097723,54.1449094873548,35.9932411455128,33.5600139064053,30.8897860317877,22.4268134971705,43.256313352928,15.627548158835,18.9592266320815,34.586029581552,35.4188385939294,36.4657554753468,47.0321765014206,30.3129883252253,31.9910922475925,49.6688933470984,39.7482328351379,39.2147280112413,42.8633548316011,62.4217749708852,33.6596324571001,29.7767759618386,28.9586285256066,32.5761179115381,49.9581808780068,39.1993416504758,32.7516273682551,22.0427166569394,26.7151937545527,30.598810470432,25.4012269383852,20.9122027778754,31.6963362030877,22.5304263405994,26.0988393212833,30.6254034393554,71.9874404867481,74.226857729761,53.9229456293012,84.7053342764661,87.429822074681,82.5367600152961,62.3189248979108,64.2729743931722,75.8048086427745,73.5447863687157,44.0410815888502,21.0898735425093,23.1371579898397,21.8378817735566,38.8131923785423,46.1402166658775,43.5217285206807,44.7004752859477,81.2939817873592,55.0144204682413,73.2254371033968,42.4864567805155,47.609188134483,45.0020296489387,31.8513860144984,32.9039074561122,54.8938827541653,59.3319817540185,58.2593694255802,55.1264203353865,46.4904149439081,38.7799150033706,37.1266330412149,39.9617426567626,32.5642122220336,32.9094126017904,46.5465037016825,43.0346164871881,51.4762520501612,20.9220173898839,20.1745994174597,17.9719643909805,42.4673846491224,40.1630755414578,38.5475894212002,19.2636269310953,14.6318278608237,19.2525792198781,29.4628585473668,28.3319644790215,39.5166825149637,46.495882706575,33.6293442475196,39.4215704634282,28.3939879403858,98.5958433876238,15.1116893658589,9.09686984426737,17.4730485967961,24.1564402626613,26.9279909673331,23.9003124234639,27.2071472372962,42.9572430318876,35.931413676009,43.3168907501298,42.6640021891999,67.5452047954988,66.887004485426,59.1463600667296,31.0580152835843,23.0454716445983,23.4538579722423,28.4515935896463,27.4018930480927,25.3677046981664,28.9387469861035,39.039450769054,25.0076516746054,44.0007042567185,20.3885093257075,32.7305904221453,32.3533699894818,27.6051898075492,23.7588874036259,24.2309289583559,29.2780797011547,32.4642395560855,24.7793343552334,34.7463861067169,40.7933857075517,35.5796635804581,22.1690146319138,22.4175295381127,45.1099124085183,21.7280400240346,24.0372529890511,21.1943805450751,25.1473957755024,51.2252000167091,30.8529287113031,19.7123751578266,25.8843482740363,30.31806321031,39.0833577536904,39.9737928167875,29.9902587493073,40.889935989948,39.9714807288731,36.3562691291748,28.9747775227698,27.8082710883366,32.9044579492006,31.8471534736747,32.8793598641362,36.7022368977789,35.1734688187388,41.5679915544046,39.2097505632432,35.1106593656617,31.1390967608805,36.0887644232403,21.7482061162277,28.6121793176937,25.5688127274641,26.988899856714,28.5308136033736,26.0711420779669,30.229412817553,25.4859731329638,32.4607651780731,25.013097186849,28.2368038216044,31.1304228656086,27.6317976233878,27.8828646419634,27.3781094271158,22.2907345477975,38.6921342546109,28.7464341195904,23.0071992997284,32.846390582426,33.4420807479031,24.7425525738419,26.8239087749046,20.0140239460383,26.2511364035332,24.2009821387701,23.7166494802576,31.4169011000337,32.8278178867899,31.7791462004166,21.5716658077013,34.7982260298258,28.0789195288658,31.1055357563054,24.7919272363112,15.7790829942313,27.900231914808,26.1835857676295,32.4027487893272,30.8594301166376,2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74277 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D9G3 | |||
|association_with_transcript=0bp_to_NM_028850,uc008xtw.1_5end | |||
|cluster_id=chr5:75440587..75440687,- | |||
|description=CAGE_peak_1_at_Chic2_5end | |||
|id=chr5:75440587..75440687,- | |||
|ontology_enrichment_celltype=CL:0002371!2.68e-07!118;CL:0000144!5.18e-07!121;CL:0000012!5.18e-07!121;CL:0000355!8.15e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,8.15e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002329!1.26e-07!11;UBERON:0003077!1.26e-07!11;UBERON:0003059!1.26e-07!11;UBERON:0007282!1.26e-07!11;UBERON:0009618!1.26e-07!11;UBERON:0007285!1.26e-07!11;UBERON:0003133!2.66e-07!24;UBERON:0000991!4.55e-07!18;UBERON:0005564!4.55e-07!18;UBERON:0004176!7.00e-07!17;UBERON:0009196!7.00e-07!17;UBERON:0009117!7.00e-07!17;UBERON:0001134!8.15e-07!9;UBERON:0002036!8.15e-07!9;UBERON:0002385!8.15e-07!9;UBERON:0000486!8.15e-07!9;UBERON:0001015!8.15e-07!9;UBERON:0004290!8.15e-07!9;UBERON:0003082!8.15e-07!9;UBERON:0000473!9.53e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.26e-07,11;UBERON:0003077,1.26e-07,11;UBERON:0007285,1.26e-07,11;UBERON:0003133,2.66e-07,24;UBERON:0000991,4.55e-07,18;UBERON:0005564,4.55e-07,18;UBERON:0004176,7.00e-07,17;UBERON:0009196,7.00e-07,17;UBERON:0009117,7.00e-07,17;UBERON:0001134,8.15e-07,9;UBERON:0002036,8.15e-07,9;UBERON:0002385,8.15e-07,9;UBERON:0000486,8.15e-07,9;UBERON:0007503,8.15e-07,9;UBERON:0001015,8.15e-07,9;UBERON:0002329,8.15e-07,9;UBERON:0003082,8.15e-07,9;UBERON:0003059,8.15e-07,9;UBERON:0007282,8.15e-07,9;UBERON:0004290,8.15e-07,9;UBERON:0009618,8.15e-07,9;UBERON:0000473,9.53e-07,14 | |||
|phase1_expression=57.1731384164114,36.9913932097723,54.1449094873548,35.9932411455128,33.5600139064053,30.8897860317877,22.4268134971705,43.256313352928,15.627548158835,18.9592266320815,34.586029581552,35.4188385939294,36.4657554753468,47.0321765014206,30.3129883252253,31.9910922475925,49.6688933470984,39.7482328351379,39.2147280112413,42.8633548316011,62.4217749708852,33.6596324571001,29.7767759618386,28.9586285256066,32.5761179115381,49.9581808780068,39.1993416504758,32.7516273682551,22.0427166569394,26.7151937545527,30.598810470432,25.4012269383852,20.9122027778754,31.6963362030877,22.5304263405994,26.0988393212833,30.6254034393554,71.9874404867481,74.226857729761,53.9229456293012,84.7053342764661,87.429822074681,82.5367600152961,62.3189248979108,64.2729743931722,75.8048086427745,73.5447863687157,44.0410815888502,21.0898735425093,23.1371579898397,21.8378817735566,38.8131923785423,46.1402166658775,43.5217285206807,44.7004752859477,81.2939817873592,55.0144204682413,73.2254371033968,42.4864567805155,47.609188134483,45.0020296489387,31.8513860144984,32.9039074561122,54.8938827541653,59.3319817540185,58.2593694255802,55.1264203353865,46.4904149439081,38.7799150033706,37.1266330412149,39.9617426567626,32.5642122220336,32.9094126017904,46.5465037016825,43.0346164871881,51.4762520501612,20.9220173898839,20.1745994174597,17.9719643909805,42.4673846491224,40.1630755414578,38.5475894212002,19.2636269310953,14.6318278608237,19.2525792198781,29.4628585473668,28.3319644790215,39.5166825149637,46.495882706575,33.6293442475196,39.4215704634282,28.3939879403858,98.5958433876238,15.1116893658589,9.09686984426737,17.4730485967961,24.1564402626613,26.9279909673331,23.9003124234639,27.2071472372962,42.9572430318876,35.931413676009,43.3168907501298,42.6640021891999,67.5452047954988,66.887004485426,59.1463600667296,31.0580152835843,23.0454716445983,23.4538579722423,28.4515935896463,27.4018930480927,25.3677046981664,28.9387469861035,39.039450769054,25.0076516746054,44.0007042567185,20.3885093257075,32.7305904221453,32.3533699894818,27.6051898075492,23.7588874036259,24.2309289583559,29.2780797011547,32.4642395560855,24.7793343552334,34.7463861067169,40.7933857075517,35.5796635804581,22.1690146319138,22.4175295381127,45.1099124085183,21.7280400240346,24.0372529890511,21.1943805450751,25.1473957755024,51.2252000167091,30.8529287113031,19.7123751578266,25.8843482740363,30.31806321031,39.0833577536904,39.9737928167875,29.9902587493073,40.889935989948,39.9714807288731,36.3562691291748,28.9747775227698,27.8082710883366,32.9044579492006,31.8471534736747,32.8793598641362,36.7022368977789,35.1734688187388,41.5679915544046,39.2097505632432,35.1106593656617,31.1390967608805,36.0887644232403,21.7482061162277,28.6121793176937,25.5688127274641,26.988899856714,28.5308136033736,26.0711420779669,30.229412817553,25.4859731329638,32.4607651780731,25.013097186849,28.2368038216044,31.1304228656086,27.6317976233878,27.8828646419634,27.3781094271158,22.2907345477975,38.6921342546109,28.7464341195904,23.0071992997284,32.846390582426,33.4420807479031,24.7425525738419,26.8239087749046,20.0140239460383,26.2511364035332,24.2009821387701,23.7166494802576,31.4169011000337,32.8278178867899,31.7791462004166,21.5716658077013,34.7982260298258,28.0789195288658,31.1055357563054,24.7919272363112,15.7790829942313,27.900231914808,26.1835857676295,32.4027487893272,30.8594301166376,23.3224033807771,24.8057989989372,26.5303902431871,12.7474629647474,23.5251599059693,27.125141325622,24.9596944747188,29.2118574799444,29.1824363300424,33.8652382869288,27.9065253327286,65.1783611635642,24.4359657737393,31.629005436018,38.3305176098558,20.2824487524464,22.2269412593458,17.5809465251474,20.7450714186248,26.7892125741577,33.3504884716053,29.8225906888907,24.4432923516271,31.6831835189478,34.1712765181304,40.4674189506223,43.7099371201469,38.1477048736982,43.1856144815111,43.850061380809,37.524699069904,38.6814359379606,44.2626119259425,27.142431109069,23.3879444042045,34.9152633843516,25.1102439137307,14.9312048688647,20.74646852682,50.491963176016,26.7619182836635,32.8128548192907,33.9681707538075,29.5130054893935,37.2791324805981,47.2333189054675,41.0460969643807,36.0281524490656,32.1481443702443,41.1099289064384,24.7417413644791,29.8074178937364,38.9963672031289,56.3588879363373,22.9308470931824,29.2039304347918,26.220308704738,22.0696196584268,30.9312330799673,26.5771703592696,32.8955608300002,39.7979571479061,39.9887102425256,32.4412614330096,34.7640433729398,34.7881408297496,31.9720184069379,21.4476951624886,29.7100805151662,31.4341601592093,31.0788700795809,35.2907064948124,28.3606419987292,37.3526276766815,29.8375650132307,51.1584323578889,66.0916061095119,24.4786521841008,40.5620182236041,45.0485750481576,40.9524760262178,42.1384374331072,38.2448296405993,27.6906794798358,15.0194494628513,27.1684700468586,32.6091251381892,33.8905985086572,29.1971108357271,24.7416552175056,31.5713879025001,30.596117398894,29.2498535356445,30.9567941321909,16.2294005062569,34.638791297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| |||
|short_description=p1@Chic2 | |||
}} |
Revision as of 14:45, 4 August 2015
Short description: | p1@Chic2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Chic2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_NM_028850, uc008xtw.1_5end |
EntrezGene: | 74277 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 8.15e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.26e-07 | 11 |
paraxial mesoderm | 1.26e-07 | 11 |
presumptive paraxial mesoderm | 1.26e-07 | 11 |
reproductive organ | 2.66e-07 | 24 |
gonad | 4.55e-07 | 18 |
gonad primordium | 4.55e-07 | 18 |
external genitalia | 7.00e-07 | 17 |
indifferent external genitalia | 7.00e-07 | 17 |
indifferent gonad | 7.00e-07 | 17 |
skeletal muscle tissue | 8.15e-07 | 9 |
striated muscle tissue | 8.15e-07 | 9 |
muscle tissue | 8.15e-07 | 9 |
multilaminar epithelium | 8.15e-07 | 9 |
epithelial vesicle | 8.15e-07 | 9 |
musculature | 8.15e-07 | 9 |
somite | 8.15e-07 | 9 |
myotome | 8.15e-07 | 9 |
presomitic mesoderm | 8.15e-07 | 9 |
presumptive segmental plate | 8.15e-07 | 9 |
dermomyotome | 8.15e-07 | 9 |
trunk paraxial mesoderm | 8.15e-07 | 9 |
testis | 9.53e-07 | 14 |