FFCP PHASE1:Mm9::chr10:72117603..72117614,+: Difference between revisions
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{{FFCP|EntrezGene=52696|HGNC=|MCL_coexpression_id=20|UniProt=Q9CQU5|association_with_transcript=10bp_to_ENSMUST00000020081_5end|description=CAGE_peak_2_at_Zwint_5end|id=chr10:72117603..72117614,+|ontology_enrichment_celltype=CL:0000540!7.75e-13!33;CL:0000047!7.75e-13!33;CL:0000031!7.75e-13!33;CL:0000404!7.75e-13!33;CL:0000117!1.28e-12!23;CL:0000337!1.28e-12!23;CL:0000393!2.15e-12!39;CL:0000211!2.15e-12!39;CL:0000221!6.25e-11!44;CL:0000133!6.25e-11!44;CL:0002319!6.60e-11!43;CL:0000055!6.71e-11!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.22e-13,33;CL:0000047,1.22e-13,33;CL:0000031,1.22e-13,33;CL:0000404,1.22e-13,33;CL:0000117,2.08e-13,23;CL:0000337,2.08e-13,23;CL:0000393,3.63e-13,39;CL:0000211,3.63e-13,39;CL:0000221,3.84e-12,44;CL:0000133,3.84e-12,44;CL:0002319,4.02e-12,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.73e-27!75;UBERON:0001016!1.73e-27!75;UBERON:0001017!6.05e-27!73;UBERON:0005743!6.05e-27!73;UBERON:0002346!2.47e-23!71;UBERON:0003075!2.47e-23!71;UBERON:0007284!2.47e-23!71;UBERON:0001049!5.81e-23!52;UBERON:0005068!5.81e-23!52;UBERON:0006241!5.81e-23!52;UBERON:0007135!5.81e-23!52;UBERON:0000955!7.37e-22!50;UBERON:0006238!7.37e-22!50;UBERON:0004121!7.46e-22!102;UBERON:0000924!7.46e-22!102;UBERON:0006601!7.46e-22!102;UBERON:0002616!3.13e-21!49;UBERON:0000033!3.84e-21!63;UBERON:0003056!1.41e-18!49;UBERON:0003080!4.95e-18!40;UBERON:0002780!2.44e-17!39;UBERON:0001890!2.44e-17!39;UBERON:0006240!2.44e-17!39;UBERON:0002020!2.94e-17!34;UBERON:0007811!2.88e-15!86;UBERON:0002791!2.15e-14!29;UBERON:0003528!2.15e-14!29;UBERON:0001893!2.15e-14!29;UBERON:0000153!4.64e-14!94;UBERON:0000956!1.02e-09!21;UBERON:0001869!1.02e-09!21;UBERON:0000203!1.02e-09!21;UBERON:0002619!1.36e-08!17;UBERON:0002021!4.92e-07!10;UBERON:0000411!4.92e-07!10;UBERON:0001950!4.92e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.61e-30,75;UBERON:0001017,1.76e-29,73;UBERON:0000073,2.46e-26,54;UBERON:0002346,1.28e-25,64;UBERON:0003075,1.28e-25,64;UBERON:0007284,1.28e-25,64;UBERON:0001049,6.93e-25,52;UBERON:0005068,6.93e-25,52;UBERON:0006241,6.93e-25,52;UBERON:0007135,6.93e-25,52;UBERON:0004121,1.99e-23,95;UBERON:0000924,1.99e-23,95;UBERON:0006601,1.99e-23,95;UBERON:0000955,1.55e-21,47;UBERON:0006238,1.55e-21,47;UBERON:0002616,7.09e-21,46;UBERON:0010371,6.35e-20,73;UBERON:0003056,8.61e-20,49;UBERON:0003080,3.30e-19,40;UBERON:0010314,4.67e-19,92;UBERON:0002780,1.82e-18,39;UBERON:0001890,1.82e-18,39;UBERON:0006240,1.82e-18,39;UBERON:0002020,2.22e-18,34;UBERON:0003528,2.62e-15,29;UBERON:0002791,2.62e-15,29;UBERON:0001893,2.62e-15,29;UBERON:0000956,2.67e-10,21;UBERON:0001869,2.67e-10,21;UBERON:0000203,2.67e-10,21;UBERON:0002619,4.27e-09,17;UBERON:0002021,1.99e-07,10;UBERON:0000411,1.99e-07,10;UBERON:0001950,1.99e-07,10|phase1_expression=1.92178616525753,0,0.454999239389536,0.60492842261366,0.500895729946347,0.671517087647559,0.934450562382103,0.774739940649458,0.703943610758334,0.234064526321993,2.39705155515707,0.957265907944037,0.684802919724823,1.22388563386596,1.99865857089398,0.809901069559304,0,0.630924330716475,1.09691546884591,0.42438965179803,6.80346321208558,1.39007331681239,2.08959831311148,0.319984845586813,0.91763712426868,0.57423196411502,0.430761996159075,0.646413698057667,0.190023419456374,0,0.221730510655305,2.54012269383853,1.84519436275371,0,0.288851619751275,0.664938581433969,0.408338712524738,0.837063261473815,1.5626706890476,0,0,1.36609096991689,0.971020706062307,1.51076181570693,1.72340783073175,2.38610777810186,0,1.74420125104357,1.09843091367236,1.94429899074283,2.37976916763116,4.31257693094915,1.00669563634642,0,1.00828139742739,2.05807548828758,1.14613375975503,1.03134418455488,5.46254444320914,12.1667925232568,7.60597684207415,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0.384218305321555,2.69592992002042,3.10513658162888,1.68259969081106,12.2829923293636,14.3564551618549,3.67472397644862,3.73797336971122,4.5960939330501,8.8092704799511,29.240400421508,36.7119614482422,6.85808696197008,10.9785172322892,9.37644067002168,54.7198678042707,32.0774687718058,42.0195181386228,9.72274332063103,16.9422300150933,5.96478226640962,2.57469057332826,1.96486056277642,0.579728977403356,1.72084775396277,0.679971333707751,0.539703191637817,0.649776417447669,0,2.10666630197628,1.36344258062446,0.519572009205738,1.06001872353102,1.69012103732017,2.56652954828636,2.54805239706646,0,0.649473123033642,1.26679932737549,0,1.37020655662872,0,1.7813056687779,1.90833859442749,1.21786191324856,1.61430848079241,1.95939432718409,2.11659672844269,0.753999547978053,0.988779870937496,0.289198713839823,0.884610551949874,0.485300549842228,1.32504911076236,0,0,8.49064311333487,11.9384622883669,0.255457055208591,1.1981512450592,1.19980546198682,0.762421362438388,31.1564529962031,16.4700217014706,5.78010019719176,15.8180131374972,17.1329356411321,26.3890816590641,18.4955039897244,0.611036183101898,0.746441823660558,1.26361379216837,1.2626511353188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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:52696 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CQU5 | |||
|association_with_transcript=10bp_to_ENSMUST00000020081_5end | |||
|cluster_id=chr10:72117603..72117614,+ | |||
|description=CAGE_peak_2_at_Zwint_5end | |||
|id=chr10:72117603..72117614,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.75e-13!33;CL:0000047!7.75e-13!33;CL:0000031!7.75e-13!33;CL:0000404!7.75e-13!33;CL:0000117!1.28e-12!23;CL:0000337!1.28e-12!23;CL:0000393!2.15e-12!39;CL:0000211!2.15e-12!39;CL:0000221!6.25e-11!44;CL:0000133!6.25e-11!44;CL:0002319!6.60e-11!43;CL:0000055!6.71e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.22e-13,33;CL:0000047,1.22e-13,33;CL:0000031,1.22e-13,33;CL:0000404,1.22e-13,33;CL:0000117,2.08e-13,23;CL:0000337,2.08e-13,23;CL:0000393,3.63e-13,39;CL:0000211,3.63e-13,39;CL:0000221,3.84e-12,44;CL:0000133,3.84e-12,44;CL:0002319,4.02e-12,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.73e-27!75;UBERON:0001016!1.73e-27!75;UBERON:0001017!6.05e-27!73;UBERON:0005743!6.05e-27!73;UBERON:0002346!2.47e-23!71;UBERON:0003075!2.47e-23!71;UBERON:0007284!2.47e-23!71;UBERON:0001049!5.81e-23!52;UBERON:0005068!5.81e-23!52;UBERON:0006241!5.81e-23!52;UBERON:0007135!5.81e-23!52;UBERON:0000955!7.37e-22!50;UBERON:0006238!7.37e-22!50;UBERON:0004121!7.46e-22!102;UBERON:0000924!7.46e-22!102;UBERON:0006601!7.46e-22!102;UBERON:0002616!3.13e-21!49;UBERON:0000033!3.84e-21!63;UBERON:0003056!1.41e-18!49;UBERON:0003080!4.95e-18!40;UBERON:0002780!2.44e-17!39;UBERON:0001890!2.44e-17!39;UBERON:0006240!2.44e-17!39;UBERON:0002020!2.94e-17!34;UBERON:0007811!2.88e-15!86;UBERON:0002791!2.15e-14!29;UBERON:0003528!2.15e-14!29;UBERON:0001893!2.15e-14!29;UBERON:0000153!4.64e-14!94;UBERON:0000956!1.02e-09!21;UBERON:0001869!1.02e-09!21;UBERON:0000203!1.02e-09!21;UBERON:0002619!1.36e-08!17;UBERON:0002021!4.92e-07!10;UBERON:0000411!4.92e-07!10;UBERON:0001950!4.92e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.61e-30,75;UBERON:0001017,1.76e-29,73;UBERON:0000073,2.46e-26,54;UBERON:0002346,1.28e-25,64;UBERON:0003075,1.28e-25,64;UBERON:0007284,1.28e-25,64;UBERON:0001049,6.93e-25,52;UBERON:0005068,6.93e-25,52;UBERON:0006241,6.93e-25,52;UBERON:0007135,6.93e-25,52;UBERON:0004121,1.99e-23,95;UBERON:0000924,1.99e-23,95;UBERON:0006601,1.99e-23,95;UBERON:0000955,1.55e-21,47;UBERON:0006238,1.55e-21,47;UBERON:0002616,7.09e-21,46;UBERON:0010371,6.35e-20,73;UBERON:0003056,8.61e-20,49;UBERON:0003080,3.30e-19,40;UBERON:0010314,4.67e-19,92;UBERON:0002780,1.82e-18,39;UBERON:0001890,1.82e-18,39;UBERON:0006240,1.82e-18,39;UBERON:0002020,2.22e-18,34;UBERON:0003528,2.62e-15,29;UBERON:0002791,2.62e-15,29;UBERON:0001893,2.62e-15,29;UBERON:0000956,2.67e-10,21;UBERON:0001869,2.67e-10,21;UBERON:0000203,2.67e-10,21;UBERON:0002619,4.27e-09,17;UBERON:0002021,1.99e-07,10;UBERON:0000411,1.99e-07,10;UBERON:0001950,1.99e-07,10 | |||
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| |||
|short_description=p2@Zwint | |||
}} |
Revision as of 16:09, 4 August 2015
Short description: | p2@Zwint |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zwint_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 10bp_to_ENSMUST00000020081_5end |
EntrezGene: | 52696 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.22e-13 | 33 |
neuronal stem cell | 1.22e-13 | 33 |
neuroblast | 1.22e-13 | 33 |
electrically signaling cell | 1.22e-13 | 33 |
CNS neuron (sensu Vertebrata) | 2.08e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.08e-13 | 23 |
electrically responsive cell | 3.63e-13 | 39 |
electrically active cell | 3.63e-13 | 39 |
ectodermal cell | 3.84e-12 | 44 |
neurectodermal cell | 3.84e-12 | 44 |
neural cell | 4.02e-12 | 43 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.61e-30 | 75 |
central nervous system | 1.76e-29 | 73 |
regional part of nervous system | 2.46e-26 | 54 |
neurectoderm | 1.28e-25 | 64 |
neural plate | 1.28e-25 | 64 |
presumptive neural plate | 1.28e-25 | 64 |
neural tube | 6.93e-25 | 52 |
neural rod | 6.93e-25 | 52 |
future spinal cord | 6.93e-25 | 52 |
neural keel | 6.93e-25 | 52 |
ectoderm-derived structure | 1.99e-23 | 95 |
ectoderm | 1.99e-23 | 95 |
presumptive ectoderm | 1.99e-23 | 95 |
brain | 1.55e-21 | 47 |
future brain | 1.55e-21 | 47 |
regional part of brain | 7.09e-21 | 46 |
ecto-epithelium | 6.35e-20 | 73 |
pre-chordal neural plate | 8.61e-20 | 49 |
anterior neural tube | 3.30e-19 | 40 |
structure with developmental contribution from neural crest | 4.67e-19 | 92 |
regional part of forebrain | 1.82e-18 | 39 |
forebrain | 1.82e-18 | 39 |
future forebrain | 1.82e-18 | 39 |
gray matter | 2.22e-18 | 34 |
brain grey matter | 2.62e-15 | 29 |
regional part of telencephalon | 2.62e-15 | 29 |
telencephalon | 2.62e-15 | 29 |
cerebral cortex | 2.67e-10 | 21 |
cerebral hemisphere | 2.67e-10 | 21 |
pallium | 2.67e-10 | 21 |
regional part of cerebral cortex | 4.27e-09 | 17 |
occipital lobe | 1.99e-07 | 10 |
visual cortex | 1.99e-07 | 10 |
neocortex | 1.99e-07 | 10 |