FFCP PHASE1:Mm9::chr12:109661348..109661367,+: Difference between revisions
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{{FFCP|EntrezGene=68519|HGNC=|UniProt=D6RII3|association_with_transcript=60bp_to_ENSMUST00000130999_5end|description=CAGE_peak_2_at_Eml1_5end|id=chr12:109661348..109661367,+|ontology_enrichment_celltype=CL:0000221!1.84e-08!44;CL:0000133!1.84e-08!44;CL:0002319!4.90e-08!43;CL:0000055!1.61e-07!50|ontology_enrichment_celltype_v019_2=CL:0000221,1.47e-08,44;CL:0000133,1.47e-08,44;CL:0002319,3.96e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.12e-16!102;UBERON:0000924!2.12e-16!102;UBERON:0006601!2.12e-16!102;UBERON:0002346!1.51e-13!71;UBERON:0003075!1.51e-13!71;UBERON:0007284!1.51e-13!71;UBERON:0000073!3.01e-13!75;UBERON:0001016!3.01e-13!75;UBERON:0000033!1.15e-12!63;UBERON:0001017!4.34e-12!73;UBERON:0005743!4.34e-12!73;UBERON:0001049!1.83e-10!52;UBERON:0005068!1.83e-10!52;UBERON:0006241!1.83e-10!52;UBERON:0007135!1.83e-10!52;UBERON:0003056!1.87e-09!49;UBERON:0002616!2.55e-09!49;UBERON:0000955!5.10e-09!50;UBERON:0006238!5.10e-09!50|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.71e-16,95;UBERON:0000924,4.71e-16,95;UBERON:0006601,4.71e-16,95;UBERON:0010371,3.68e-14,73;UBERON:0002346,1.11e-13,64;UBERON:0003075,1.11e-13,64;UBERON:0007284,1.11e-13,64;UBERON:0001016,2.05e-13,75;UBERON:0001017,3.08e-12,73;UBERON:0000073,6.52e-11,54;UBERON:0001049,1.37e-10,52;UBERON:0005068,1.37e-10,52;UBERON:0006241,1.37e-10,52;UBERON:0007135,1.37e-10,52;UBERON:0003056,1.44e-09,49;UBERON:0010314,1.81e-09,92;UBERON:0002616,1.44e-08,46;UBERON:0000955,2.83e-08,47;UBERON:0006238,2.83e-08,47;UBERON:0002020,9.93e-07,34|phase1_expression=14.0930985452219,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0.57423196411502,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,4.28049181116963,5.77848507951233,6.24058957349717,4.69434806608824,10.4652075062614,15.5977189741475,6.22175677037707,9.51907667052465,18.6878333674463,0,0,0,2.05807548828758,2.86533439938757,1.03134418455488,4.85559506063035,3.1739458756322,3.1691570175309,6.09920157724438,5.33576877666684,2.6996991518442,0,1.4209602298922,3.89480143673926,4.61061966385865,6.11768712620018,5.53524347159932,5.8890989178387,9.14083150092171,7.50953039235486,3.30725157880376,2.30029130443767,6.43453150627015,3.30347642998166,11.7472351038373,9.83081812839958,2.50583946687368,3.38504281328916,5.73004707612436,11.1673199600552,6.19038871034848,6.57032465440283,6.48182888042069,5.55249555116501,4.10078780815661,43.7697397465804,34.3850598485874,4.34796733052517,2.58127163094416,0,0,0,0,1.12355536105401,8.35108580632483,4.67614808285164,7.0667914902068,8.45060518660083,8.98285341900225,0,0,0,0,0,0.34255163915718,1.03575153458869,2.3750742250372,5.37804512975021,4.26251669636998,3.68984795609694,3.91878865436819,5.52666923537813,3.39299796590124,1.97755974187499,1.3013942122792,0.884610551949874,7.92657564742305,1.98757366614354,3.39412677194655,1.86391761218122,6.44117753425404,9.21565509979202,0.510914110417183,0,0,0,5.54225365797844,4.57500602818627,3.26701315493447,4.34560800480691,6.39288643325826,7.68815764870372,9.08551073179443,10.6931332042832,3.23458123586242,1.26361379216837,4.41927897361595,5.33493816147085,9.19608417733892,9.90341713929421,14.1662528765572,17.5534167810426,15.8861013153214,20.4269759540209,5.17406741478031,2.80238390812695,1.13463648100692,2.99116911078713,3.5071317188412,3.33656699070717,6.268538997399,5.35033554660653,3.78165106955137,0,0,0,1.44988040774851,1.64168241986767,1.2604344302271,2.13070262026689,0.787056926989615,2.93107514486019,1.39520366850245,1.87791380979733,2.33530684734339,2.30383789878873,1.80584210487005,2.75633952455909,2.63159977365598,2.85415149878366,2.54992195644706,5.25724871410318,3.70456604565424,0,0,4.47905326123991,5.10920678092965,7.21657783403723,5.64713868945359,5.55945109612176,5.32631753115166,3.79623249235609,4.44687177754829,5.02670417600539,2.38747766449381,5.65395852645448,1.79763881730844,2.16138049874694,1.99141273254367,3.79335801906163,3.88444942873078,2.25415471346161,4.48032921259691,5.43066964069352,6.38235961001899,5.56481526693464,2.65698266363284,2.98297582898612,2.71473760627961,0,0.333690211432188,1.17935397067922,0.674586337154561,0.811440485554012,0.241177159752417,1.2731292589071,0.287696137450811,1.29708181420028,1.09824565275233,2.87536413054709,1.11642284300551,1.5601883655728,1.26289438973556,0.538192240565737,0.964887042726734,2.21703828199926,3.97931964718018,8.47417877498535,8.31750920298422,10.7957514212711,12.5629693081362,7.61739650835244,10.1469496886055,11.1920952315396,9.7444463445461,8.29164797018933,4.58817281204066,5.52591941970866,3.61622646453779,0,0,0,0.827810238914197,16.5367107687426,15.589154316763,14.4262751931474,2.52470927204373,2.83957397474631,3.51394869866975,2.15423397732799,4.30143836314594,5.56996685205985,7.92614286208731,2.83367491172426,3.21481443702443,1.97643888973262,2.24924921495265,5.10984306749767,6.23229612835393,5.86393053672874,14.352400698610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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68519 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D6RII3 | |||
|association_with_transcript=60bp_to_ENSMUST00000130999_5end | |||
|cluster_id=chr12:109661348..109661367,+ | |||
|description=CAGE_peak_2_at_Eml1_5end | |||
|id=chr12:109661348..109661367,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.84e-08!44;CL:0000133!1.84e-08!44;CL:0002319!4.90e-08!43;CL:0000055!1.61e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.47e-08,44;CL:0000133,1.47e-08,44;CL:0002319,3.96e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.12e-16!102;UBERON:0000924!2.12e-16!102;UBERON:0006601!2.12e-16!102;UBERON:0002346!1.51e-13!71;UBERON:0003075!1.51e-13!71;UBERON:0007284!1.51e-13!71;UBERON:0000073!3.01e-13!75;UBERON:0001016!3.01e-13!75;UBERON:0000033!1.15e-12!63;UBERON:0001017!4.34e-12!73;UBERON:0005743!4.34e-12!73;UBERON:0001049!1.83e-10!52;UBERON:0005068!1.83e-10!52;UBERON:0006241!1.83e-10!52;UBERON:0007135!1.83e-10!52;UBERON:0003056!1.87e-09!49;UBERON:0002616!2.55e-09!49;UBERON:0000955!5.10e-09!50;UBERON:0006238!5.10e-09!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.71e-16,95;UBERON:0000924,4.71e-16,95;UBERON:0006601,4.71e-16,95;UBERON:0010371,3.68e-14,73;UBERON:0002346,1.11e-13,64;UBERON:0003075,1.11e-13,64;UBERON:0007284,1.11e-13,64;UBERON:0001016,2.05e-13,75;UBERON:0001017,3.08e-12,73;UBERON:0000073,6.52e-11,54;UBERON:0001049,1.37e-10,52;UBERON:0005068,1.37e-10,52;UBERON:0006241,1.37e-10,52;UBERON:0007135,1.37e-10,52;UBERON:0003056,1.44e-09,49;UBERON:0010314,1.81e-09,92;UBERON:0002616,1.44e-08,46;UBERON:0000955,2.83e-08,47;UBERON:0006238,2.83e-08,47;UBERON:0002020,9.93e-07,34 | |||
|phase1_expression=14.0930985452219,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0.57423196411502,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,4.28049181116963,5.77848507951233,6.24058957349717,4.69434806608824,10.4652075062614,15.5977189741475,6.22175677037707,9.51907667052465,18.6878333674463,0,0,0,2.05807548828758,2.86533439938757,1.03134418455488,4.85559506063035,3.1739458756322,3.1691570175309,6.09920157724438,5.33576877666684,2.6996991518442,0,1.4209602298922,3.89480143673926,4.61061966385865,6.11768712620018,5.53524347159932,5.8890989178387,9.14083150092171,7.50953039235486,3.30725157880376,2.30029130443767,6.43453150627015,3.30347642998166,11.7472351038373,9.83081812839958,2.50583946687368,3.38504281328916,5.73004707612436,11.1673199600552,6.19038871034848,6.57032465440283,6.48182888042069,5.55249555116501,4.10078780815661,43.7697397465804,34.3850598485874,4.34796733052517,2.58127163094416,0,0,0,0,1.12355536105401,8.35108580632483,4.67614808285164,7.0667914902068,8.45060518660083,8.98285341900225,0,0,0,0,0,0.34255163915718,1.03575153458869,2.3750742250372,5.37804512975021,4.26251669636998,3.68984795609694,3.91878865436819,5.52666923537813,3.39299796590124,1.97755974187499,1.3013942122792,0.884610551949874,7.92657564742305,1.98757366614354,3.39412677194655,1.86391761218122,6.44117753425404,9.21565509979202,0.510914110417183,0,0,0,5.54225365797844,4.57500602818627,3.26701315493447,4.34560800480691,6.39288643325826,7.68815764870372,9.08551073179443,10.6931332042832,3.23458123586242,1.26361379216837,4.41927897361595,5.33493816147085,9.19608417733892,9.90341713929421,14.1662528765572,17.5534167810426,15.8861013153214,20.4269759540209,5.17406741478031,2.80238390812695,1.13463648100692,2.99116911078713,3.5071317188412,3.33656699070717,6.268538997399,5.35033554660653,3.78165106955137,0,0,0,1.44988040774851,1.64168241986767,1.2604344302271,2.13070262026689,0.787056926989615,2.93107514486019,1.39520366850245,1.87791380979733,2.33530684734339,2.30383789878873,1.80584210487005,2.75633952455909,2.63159977365598,2.85415149878366,2.54992195644706,5.25724871410318,3.70456604565424,0,0,4.47905326123991,5.10920678092965,7.21657783403723,5.64713868945359,5.55945109612176,5.32631753115166,3.79623249235609,4.44687177754829,5.02670417600539,2.38747766449381,5.65395852645448,1.79763881730844,2.16138049874694,1.99141273254367,3.79335801906163,3.88444942873078,2.25415471346161,4.48032921259691,5.43066964069352,6.38235961001899,5.56481526693464,2.65698266363284,2.98297582898612,2.71473760627961,0,0.333690211432188,1.17935397067922,0.674586337154561,0.811440485554012,0.241177159752417,1.2731292589071,0.287696137450811,1.29708181420028,1.09824565275233,2.87536413054709,1.11642284300551,1.5601883655728,1.26289438973556,0.538192240565737,0.964887042726734,2.21703828199926,3.97931964718018,8.47417877498535,8.31750920298422,10.7957514212711,12.5629693081362,7.61739650835244,10.1469496886055,11.1920952315396,9.7444463445461,8.29164797018933,4.58817281204066,5.52591941970866,3.61622646453779,0,0,0,0.827810238914197,16.5367107687426,15.589154316763,14.4262751931474,2.52470927204373,2.83957397474631,3.51394869866975,2.15423397732799,4.30143836314594,5.56996685205985,7.92614286208731,2.83367491172426,3.21481443702443,1.97643888973262,2.24924921495265,5.10984306749767,6.23229612835393,5.86393053672874,14.3524006986106,2.65490276679926,2.42780636154981,2.72091201268276,2.45186603682668,3.2483208216885,5.84126781093462,4.13485269069154,7.63420831902762,4.27796854061666,2.52829406348653,3.16255825724996,3.09406629744561,4.08527526904546,4.50152735078276,4.65691261617916,2.14337035031592,4.25616560741457,3.74574516964348,3.1264313914403,4.56697423671899,1.87737366450968,1.27099242518292,1.32317038832977,3.2977250588296,7.91175690809937,6.45348296731268,4.29740438411291,4.10352249362653,2.91480836629851,23.3635880533242,0.170870880797853,5.57244543500701,3.33350149265481,1.69531611304222,0.546776910884101,0.457556346413045,0.169978429993855,0.279902904647316,0.138199973804424,0.954670618015114,3.32152793260192,5.89626454667861,6.58832579012988,7.3180903605064,6.98760203987768,10.3845546716312,9.50514740841363,5.23511883968059,2.98114438571124,0.621339313086926,0.56369293868419,2.69129782879162,2.64733584731356,4.66682852025714,6.97463046779748,2.87225413334323,6.10257640957921,6.2498104725096,2.72634295506848,0.966336483304024,1.72818003754719,0,0.810900861160657,1.1298205288131,0.389762468933385,0.358053391334963,0.596044064343795,0,0,0.100966449948148,0.228620419965,0.302478555410522,0,0,0.116876902181569,1.36038230169127,0.443971906748129,0.538283139656854,1.51096154727671,4.44336066274038,3.00291960721891,5.12824547948342,2.57242054894879,6.01886524842436,6.21227026878773,5.9842280745933,7.44764167471216,7.04598047609119,1.37016503954128,5.2877572817279,4.05013500139084,5.40385443869065,4.53142408984205,7.24864436452548,6.33102820263478,3.19219898720825,3.243938509328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| |||
|short_description=p2@Eml1 | |||
}} |
Revision as of 16:23, 4 August 2015
Short description: | p2@Eml1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Eml1_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_ENSMUST00000130999_5end |
EntrezGene: | 68519 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.47e-08 | 44 |
neurectodermal cell | 1.47e-08 | 44 |
neural cell | 3.96e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.71e-16 | 95 |
ectoderm | 4.71e-16 | 95 |
presumptive ectoderm | 4.71e-16 | 95 |
ecto-epithelium | 3.68e-14 | 73 |
neurectoderm | 1.11e-13 | 64 |
neural plate | 1.11e-13 | 64 |
presumptive neural plate | 1.11e-13 | 64 |
nervous system | 2.05e-13 | 75 |
central nervous system | 3.08e-12 | 73 |
regional part of nervous system | 6.52e-11 | 54 |
neural tube | 1.37e-10 | 52 |
neural rod | 1.37e-10 | 52 |
future spinal cord | 1.37e-10 | 52 |
neural keel | 1.37e-10 | 52 |
pre-chordal neural plate | 1.44e-09 | 49 |
structure with developmental contribution from neural crest | 1.81e-09 | 92 |
regional part of brain | 1.44e-08 | 46 |
brain | 2.83e-08 | 47 |
future brain | 2.83e-08 | 47 |
gray matter | 9.93e-07 | 34 |