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FFCP PHASE1:Mm9::chr17:34259624..34259666,+: Difference between revisions

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{{FFCP|EntrezGene=14998|HGNC=|UniProt=Q31621|association_with_transcript=-110bp_to_uc008cbl.1_5end|description=CAGE_peak_3_at_H2-DMa_5end|id=chr17:34259624..34259666,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.04e-12!63;UBERON:0000955!7.94e-12!50;UBERON:0006238!7.94e-12!50;UBERON:0001049!1.32e-11!52;UBERON:0005068!1.32e-11!52;UBERON:0006241!1.32e-11!52;UBERON:0007135!1.32e-11!52;UBERON:0002616!3.14e-11!49;UBERON:0003056!1.81e-10!49;UBERON:0003080!2.52e-10!40;UBERON:0002346!3.47e-10!71;UBERON:0003075!3.47e-10!71;UBERON:0007284!3.47e-10!71;UBERON:0002780!7.28e-10!39;UBERON:0001890!7.28e-10!39;UBERON:0006240!7.28e-10!39;UBERON:0000468!1.09e-09!333;UBERON:0001017!1.17e-09!73;UBERON:0005743!1.17e-09!73;UBERON:0004121!5.11e-09!102;UBERON:0000924!5.11e-09!102;UBERON:0006601!5.11e-09!102;UBERON:0000073!1.02e-08!75;UBERON:0001016!1.02e-08!75;UBERON:0000153!1.38e-07!94;UBERON:0000922!2.72e-07!328;UBERON:0002791!5.38e-07!29;UBERON:0003528!5.38e-07!29;UBERON:0001893!5.38e-07!29;UBERON:0002020!7.47e-07!34;UBERON:0007811!9.39e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.69e-13,73;UBERON:0002346,2.50e-12,64;UBERON:0003075,2.50e-12,64;UBERON:0007284,2.50e-12,64;UBERON:0000955,3.46e-12,47;UBERON:0006238,3.46e-12,47;UBERON:0001049,9.12e-12,52;UBERON:0005068,9.12e-12,52;UBERON:0006241,9.12e-12,52;UBERON:0007135,9.12e-12,52;UBERON:0002616,1.45e-11,46;UBERON:0000073,2.85e-11,54;UBERON:0003056,1.14e-10,49;UBERON:0004121,1.39e-10,95;UBERON:0000924,1.39e-10,95;UBERON:0006601,1.39e-10,95;UBERON:0003080,1.60e-10,40;UBERON:0002780,4.74e-10,39;UBERON:0001890,4.74e-10,39;UBERON:0006240,4.74e-10,39;UBERON:0001017,7.58e-10,73;UBERON:0001016,7.52e-09,75;UBERON:0010314,1.48e-07,92;UBERON:0003528,4.10e-07,29;UBERON:0002791,4.10e-07,29;UBERON:0001893,4.10e-07,29;UBERON:0002020,8.05e-07,34|phase1_expression=1.92178616525753,2.44282785347553,1.81999695755814,2.41971369045464,0.500895729946347,0,0.233612640595526,0.774739940649458,0.281577444303333,1.40438715793196,1.54096171402954,0.478632953972018,0.171200729931206,0.524522414513984,1.33243904726265,1.01237633694913,0,0.473193248037357,0.822686601634433,0,1.87095238332354,0.595745707205312,0.522399578277871,0.639969691173627,0.68822784320151,0,0,0.215471232685889,0.570070258369122,1.51218077855958,0.665191531965914,1.27006134691926,1.23012957516914,0,0,0,0.204169356262369,1.67412652294763,0,0.523523743973798,0,0.683045484958446,2.42755176515577,1.38486499773135,2.12891555560981,1.28482726513177,2.34717403304412,0.218025156380447,0.219686182734472,0.777719596297134,0.979904951377538,0,0.503347818173209,0,0.336093799142464,0.514518872071894,0.286533439938757,0.515672092277442,2.42779753031517,2.64495489636016,1.26766280701236,0,0,1.3498495759221,0.988866362566974,1.4209602298922,2.69640099466564,1.53687322128622,3.42175720617976,2.02508907497536,1.89292465216244,4.57041575046086,0.883474163806454,2.44981598429908,2.39613677545591,2.75765635983006,1.10115880999389,2.80912143787413,2.4577045320999,3.82470234417562,2.74462930807229,1.56274011167028,3.35019598801657,1.12552522006336,1.83357897332172,2.06240009831567,2.27794689278565,1.86399445825301,0.681535739998656,0.453429360640713,1.15945795480671,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0.983110940922263,0.852151612890289,1.03914401841148,2.47337702157238,1.40843419776681,0,0,0,0.649473123033642,0.253359865475099,0,0.45673551887624,3.36619248741323,0.593768556259299,1.73485326766136,1.82679286987285,1.15307748628029,1.20578112442098,1.64624189989987,1.0053327306374,0.247194967734374,1.87979163995885,2.65383165584962,1.13236794963186,1.10420759230197,1.93950101254089,0,6.44117753425404,7.54008144528438,1.53274233125155,0.11981512450592,0,0.508280908292259,3.74476598512057,5.49000723382352,5.78010019719176,6.43149984711423,5.37002460393694,4.57133698031032,4.05603157669394,2.64782346010822,2.98576729464223,1.76905930903572,2.31486041475121,1.43132487258974,1.37941262660084,2.16074555766419,3.0140963567143,2.9255694635071,2.0498195245576,2.52994656311268,2.06962696591213,1.72454394346274,2.08016688184601,2.28736461413134,1.31517439456545,1.94633074457919,3.1342694986995,3.90986059175093,3.58261680273288,0,0.772043721344145,0.568326998791185,1.24275463521301,0.234526059981096,2.16074473753218,2.13070262026689,1.96764231747404,1.54267112887378,2.32533944750408,2.14618721119695,1.86824547787471,0.987359099480883,1.47750717671186,2.43206428637567,1.46199987425332,1.97595103761946,2.01309628140558,5.25724871410318,4.73361216944708,3.63460661282178,0.793351699990633,0.853153002140936,1.16118335930219,1.9330119198314,2.01683524623343,1.11189021922435,0.760902504450237,0.949058123089023,0.164698954724011,1.50801125280162,1.1937388322469,0.779856348476481,0,1.72910439899755,0.796565093017469,1.70701110857774,1.71372768914593,3.38123207019241,3.05476991767971,2.32742984601151,2.38461787627083,2.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:14998
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q31621
|association_with_transcript=-110bp_to_uc008cbl.1_5end
|cluster_id=chr17:34259624..34259666,+
|description=CAGE_peak_3_at_H2-DMa_5end
|id=chr17:34259624..34259666,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.04e-12!63;UBERON:0000955!7.94e-12!50;UBERON:0006238!7.94e-12!50;UBERON:0001049!1.32e-11!52;UBERON:0005068!1.32e-11!52;UBERON:0006241!1.32e-11!52;UBERON:0007135!1.32e-11!52;UBERON:0002616!3.14e-11!49;UBERON:0003056!1.81e-10!49;UBERON:0003080!2.52e-10!40;UBERON:0002346!3.47e-10!71;UBERON:0003075!3.47e-10!71;UBERON:0007284!3.47e-10!71;UBERON:0002780!7.28e-10!39;UBERON:0001890!7.28e-10!39;UBERON:0006240!7.28e-10!39;UBERON:0000468!1.09e-09!333;UBERON:0001017!1.17e-09!73;UBERON:0005743!1.17e-09!73;UBERON:0004121!5.11e-09!102;UBERON:0000924!5.11e-09!102;UBERON:0006601!5.11e-09!102;UBERON:0000073!1.02e-08!75;UBERON:0001016!1.02e-08!75;UBERON:0000153!1.38e-07!94;UBERON:0000922!2.72e-07!328;UBERON:0002791!5.38e-07!29;UBERON:0003528!5.38e-07!29;UBERON:0001893!5.38e-07!29;UBERON:0002020!7.47e-07!34;UBERON:0007811!9.39e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.69e-13,73;UBERON:0002346,2.50e-12,64;UBERON:0003075,2.50e-12,64;UBERON:0007284,2.50e-12,64;UBERON:0000955,3.46e-12,47;UBERON:0006238,3.46e-12,47;UBERON:0001049,9.12e-12,52;UBERON:0005068,9.12e-12,52;UBERON:0006241,9.12e-12,52;UBERON:0007135,9.12e-12,52;UBERON:0002616,1.45e-11,46;UBERON:0000073,2.85e-11,54;UBERON:0003056,1.14e-10,49;UBERON:0004121,1.39e-10,95;UBERON:0000924,1.39e-10,95;UBERON:0006601,1.39e-10,95;UBERON:0003080,1.60e-10,40;UBERON:0002780,4.74e-10,39;UBERON:0001890,4.74e-10,39;UBERON:0006240,4.74e-10,39;UBERON:0001017,7.58e-10,73;UBERON:0001016,7.52e-09,75;UBERON:0010314,1.48e-07,92;UBERON:0003528,4.10e-07,29;UBERON:0002791,4.10e-07,29;UBERON:0001893,4.10e-07,29;UBERON:0002020,8.05e-07,34
|phase1_expression=1.92178616525753,2.44282785347553,1.81999695755814,2.41971369045464,0.500895729946347,0,0.233612640595526,0.774739940649458,0.281577444303333,1.40438715793196,1.54096171402954,0.478632953972018,0.171200729931206,0.524522414513984,1.33243904726265,1.01237633694913,0,0.473193248037357,0.822686601634433,0,1.87095238332354,0.595745707205312,0.522399578277871,0.639969691173627,0.68822784320151,0,0,0.215471232685889,0.570070258369122,1.51218077855958,0.665191531965914,1.27006134691926,1.23012957516914,0,0,0,0.204169356262369,1.67412652294763,0,0.523523743973798,0,0.683045484958446,2.42755176515577,1.38486499773135,2.12891555560981,1.28482726513177,2.34717403304412,0.218025156380447,0.219686182734472,0.777719596297134,0.979904951377538,0,0.503347818173209,0,0.336093799142464,0.514518872071894,0.286533439938757,0.515672092277442,2.42779753031517,2.64495489636016,1.26766280701236,0,0,1.3498495759221,0.988866362566974,1.4209602298922,2.69640099466564,1.53687322128622,3.42175720617976,2.02508907497536,1.89292465216244,4.57041575046086,0.883474163806454,2.44981598429908,2.39613677545591,2.75765635983006,1.10115880999389,2.80912143787413,2.4577045320999,3.82470234417562,2.74462930807229,1.56274011167028,3.35019598801657,1.12552522006336,1.83357897332172,2.06240009831567,2.27794689278565,1.86399445825301,0.681535739998656,0.453429360640713,1.15945795480671,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0.983110940922263,0.852151612890289,1.03914401841148,2.47337702157238,1.40843419776681,0,0,0,0.649473123033642,0.253359865475099,0,0.45673551887624,3.36619248741323,0.593768556259299,1.73485326766136,1.82679286987285,1.15307748628029,1.20578112442098,1.64624189989987,1.0053327306374,0.247194967734374,1.87979163995885,2.65383165584962,1.13236794963186,1.10420759230197,1.93950101254089,0,6.44117753425404,7.54008144528438,1.53274233125155,0.11981512450592,0,0.508280908292259,3.74476598512057,5.49000723382352,5.78010019719176,6.43149984711423,5.37002460393694,4.57133698031032,4.05603157669394,2.64782346010822,2.98576729464223,1.76905930903572,2.31486041475121,1.43132487258974,1.37941262660084,2.16074555766419,3.0140963567143,2.9255694635071,2.0498195245576,2.52994656311268,2.06962696591213,1.72454394346274,2.08016688184601,2.28736461413134,1.31517439456545,1.94633074457919,3.1342694986995,3.90986059175093,3.58261680273288,0,0.772043721344145,0.568326998791185,1.24275463521301,0.234526059981096,2.16074473753218,2.13070262026689,1.96764231747404,1.54267112887378,2.32533944750408,2.14618721119695,1.86824547787471,0.987359099480883,1.47750717671186,2.43206428637567,1.46199987425332,1.97595103761946,2.01309628140558,5.25724871410318,4.73361216944708,3.63460661282178,0.793351699990633,0.853153002140936,1.16118335930219,1.9330119198314,2.01683524623343,1.11189021922435,0.760902504450237,0.949058123089023,0.164698954724011,1.50801125280162,1.1937388322469,0.779856348476481,0,1.72910439899755,0.796565093017469,1.70701110857774,1.71372768914593,3.38123207019241,3.05476991767971,2.32742984601151,2.38461787627083,2.15004226222475,0.590440591918409,1.09899109488962,1.60416313098341,0.889357881261447,1.33476084572875,0.393117990226406,0.674586337154561,0.811440485554012,1.20588579876208,1.01850340712568,0.575392274901621,0.486405680325106,0.274561413188081,7.18841032636773,1.86070473834252,0.624075346229121,0.505157755894224,0.896987067609561,2.41221760681684,0.923765950833023,1.13694847062291,0.651859905768103,2.37643120085263,1.17345124144251,3.85264392116176,2.85652369063216,2.14647012643579,2.99506773801763,1.7717175171902,3.02964060449226,1.80249646187312,3.45369963731791,0.867894351489069,3.01582567878545,0.54390568381871,1.96705709207614,2.20749397043786,2.40825884981688,3.28192722458169,0,2.52470927204373,3.47059041357882,1.56175497718655,2.15423397732799,1.91175038362042,1.33679204449436,1.41538265394416,0.404810701674894,0.292255857911312,2.37172666767914,7.06906896127976,3.26462195979018,3.73937767701236,3.74640006513225,3.62934270539578,3.98235415019888,1.45668381692989,0.906970670894253,1.13163047853539,3.54362271456927,1.53717573971964,1.80899805217755,2.54473610634254,1.06949213515416,3.79244109522979,1.05418608574999,2.06271086496374,5.44703369206061,1.8006109403131,2.06973894052407,2.7863814554107,2.48276327099183,3.56737635204141,3.78462747384878,2.74018454203139,1.40803024838226,2.96564899209348,2.42581237860458,4.45192882941996,3.06782410722221,3.37752379597673,1.90995750405018,2.29797259643086,0.874442509889552,4.45020724825223,1.19609616558497,2.27025554759545,2.77791791054568,1.69531611304222,0.820165366326151,1.37266903923914,0.849892149969277,0.279902904647316,0.138199973804424,0.954670618015114,0.949007980743406,2.03319467126849,2.05210147561422,2.29997125615916,0.87345025498471,1.34864346384821,1.90102948168273,1.04702376793612,3.75883422546199,5.59205381778233,0.56369293868419,1.49516546043979,2.48187735685646,1.55560950675238,2.32487682259916,3.8859908862879,2.46450201156083,2.99470085141085,2.30690557736564,1.20792060413003,1.44015003128933,3.16011120628178,0.810900861160657,1.54066435747241,0.909445760844565,1.25318686967237,2.18549490259391,1.44234539423963,1.47689527174577,2.1202954489111,2.057583779685,1.91569751759997,1.65678397257579,1.53938946624527,2.45441494581295,2.0405734525369,0.887943813496259,0.717710852875806,0.671538465456314,4.63655025677257,2.43987218086537,3.47988086107804,1.71494703263253,5.517293144389,4.51801474093653,3.22227665555024,2.29158205375759,3.26521046453006,2.74033007908257,6.0431511791176,3.37511250115903,3.60256962579376,4.53142408984205,3.62432218226274,0.415149390336707,2.39414924040619,2.21953687480374,2.67417388775123,1.25767897576789,2.5738091183002,2.44471400581777,3.5025959730612,2.56735367673452,2.77966932940177,2.5347929989024,3.9611531691076,2.62196220915671,2.4969809437899,3.0440798546475,4.28664322154766,2.78122382267653,2.31491064556446,3.70877310722976,2.20798380201596,2.40008476669791,2.8396128985494,1.66905332963125,2.47088908274958,2.91739079287525,2.5384382367503,2.56099162021882,3.41990624869196,1.90125759384206,2.80571135828869,3.32178050747688,3.15214343601803,6.13846564754534,3.25367366490529,2.3148793317737,1.49886346762768,3.97683734357194,2.14871054048298,2.48674831689496,2.20591419119516,1.62307484934295
|short_description=p3@H2-DMa
}}

Revision as of 16:40, 4 August 2015

Short description:p3@H2-DMa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_H2-DMa_5end
Coexpression cluster:NA
Association with transcript: -110bp_to_uc008cbl.1_5end
EntrezGene:14998
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@H2-DMa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F15.78
cortex, adult.CNhs10473.12-14D56.43
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C62.93
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G12.43
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G14.73
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.38
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A33.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I73.26
ovary, embryo E18.CNhs11040.505-44H73.74
ovary, neonate N00.CNhs11217.1299-22I43.75
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C34.45
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H33.38
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I13.76
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ecto-epithelium2.69e-1373
neurectoderm2.50e-1264
neural plate2.50e-1264
presumptive neural plate2.50e-1264
brain3.46e-1247
future brain3.46e-1247
neural tube9.12e-1252
neural rod9.12e-1252
future spinal cord9.12e-1252
neural keel9.12e-1252
regional part of brain1.45e-1146
regional part of nervous system2.85e-1154
pre-chordal neural plate1.14e-1049
ectoderm-derived structure1.39e-1095
ectoderm1.39e-1095
presumptive ectoderm1.39e-1095
anterior neural tube1.60e-1040
regional part of forebrain4.74e-1039
forebrain4.74e-1039
future forebrain4.74e-1039
central nervous system7.58e-1073
nervous system7.52e-0975
structure with developmental contribution from neural crest1.48e-0792
brain grey matter4.10e-0729
regional part of telencephalon4.10e-0729
telencephalon4.10e-0729
gray matter8.05e-0734
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