FFCP PHASE1:Mm9::chr9:121206679..121206692,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=67095|HGNC=|UniProt=Q8BWK8,A2VDH1,Q80TL6|association_with_transcript=27bp_to_uc009sda.1,uc009sdb.1,uc009sdc.1,uc009sdd.1_5end|description=CAGE_peak_2_at_Trak1_5end|id=chr9:121206679..121206692,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!9.95e-09!18;UBERON:0000948!9.95e-09!18;UBERON:0005498!9.95e-09!18;UBERON:0004140!9.95e-09!18;UBERON:0009881!9.95e-09!18;UBERON:0004141!9.95e-09!18;UBERON:0003084!9.95e-09!18;UBERON:0007005!9.95e-09!18;UBERON:0004139!9.95e-09!18;UBERON:0004291!9.95e-09!18;UBERON:0004535!4.99e-07!23;UBERON:0001009!4.99e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.03e-09,18;UBERON:0000948,8.03e-09,18;UBERON:0005498,8.03e-09,18;UBERON:0004140,8.03e-09,18;UBERON:0009881,8.03e-09,18;UBERON:0004141,8.03e-09,18;UBERON:0003084,8.03e-09,18;UBERON:0007005,8.03e-09,18;UBERON:0004139,8.03e-09,18;UBERON:0004291,8.03e-09,18;UBERON:0004535,3.10e-07,23;UBERON:0001009,3.10e-07,23|phase1_expression=2.24208385946712,14.3079917132138,18.1999695755814,20.5675663688644,34.0609096363516,4.19698179779725,3.73780224952841,1.03298658753261,1.83025338797167,1.40438715793196,0.171217968225505,0.319088635981346,0.342401459862411,0.699363219351979,0,0.404950534779652,1.39912375625629,0.946386496074713,1.50825876966313,3.81950686618227,1.61582251287033,0.893618560807968,1.56719873483361,1.11994695955385,1.37645568640302,9.76194338995534,9.04600191934057,3.23206849028834,2.09025761402011,3.52842181663903,1.55211357458713,0,0,0,2.02196133825892,0.831173226792462,2.45003227514843,0.837063261473815,0,1.57057123192139,0.588231488031014,0,0.485510353031154,0.377690453926732,0.608261587317087,0.367093504323363,0,1.52617609466313,2.63623419281366,1.55543919259427,0.699932108126813,1.43752564364972,2.51673909086605,0.725362142011344,2.35265659399725,4.11615097657515,3.43840127926508,4.64104883049698,1.01158230429799,0.528990979272033,1.26766280701236,1.0165335962074,0.889294796111139,0,0,0,0.898800331555214,3.45796474789399,2.90330914463737,2.29510095163874,1.47227472945967,3.42781181284564,0.883474163806454,1.10241719293459,0.575072826109418,0,0,2.42605942361857,1.99688493233117,1.31886287730194,1.18933936683133,1.56274011167028,1.11673199600552,1.12552522006336,1.22238598221448,0.883885756421003,0.711858403995515,1.3047961207771,0.605809546665472,0.68014404096107,4.34796733052517,0,1.3599426674155,2.15881276655127,0.649776417447669,0.896053774194671,4.21333260395256,0.340860645156116,1.29893002301434,0.70667914902068,0.985903938436763,2.56652954828636,2.54805239706646,21.3320010945999,0.216491041011214,0,0,2.51204535381932,0.776813650941515,0.593768556259299,0.693941307064543,0.304465478312141,0.230615497256059,0.60289056221049,0.823120949949934,0.879666139307728,1.48316980640624,4.04878199375753,1.76922110389975,4.52947179852746,5.96272099843063,4.84875253135222,0,2.92780797011547,4.39838084308256,4.34276993854605,1.55759661857696,0.599902730993408,1.39777249780371,1.19832511523858,0.915001205637253,0.879580464790051,0.347648640384553,0.767146371990992,1.45451631191692,1.46017136760982,2.24046600470696,1.99051152976149,0.758168275301024,3.57751155007006,0.520481771850815,0.919608417733892,0.720248519221397,0.90422890701429,0.340182495756639,0.896796041993948,1.21812241927647,2.84573707812917,0.215567992932842,0.378212160335639,0.351902248327898,1.09597866213787,0.834141747676794,2.089512999133,1.4404749548556,0.199034266818493,0.702213187313235,1.28673953557358,1.13665399758237,1.44988040774851,0.938104239924385,2.34080679899319,2.84093682702252,2.55793501271625,3.70241070929708,7.20855228726264,5.90201483079162,6.53885917256149,12.0128690436841,16.4167464079095,29.8333219128749,27.7779976108131,26.5655639502171,25.4992195644706,0.420579897128254,1.54356918568927,7.26921322564356,4.23120906661671,0.426576501070468,0.232236671860439,0.515469845288373,1.00841762311671,0.889512175379481,1.52180500890047,2.84717436926707,0.988193728344065,1.25667604400135,1.1937388322469,1.75467678407208,3.59527763461689,2.80979464837102,2.98711909881551,0.189667900953082,0.456994050438915,0,0.407302655690628,0.775809948670503,0.701358198903186,1.20149420536089,1.62371162777562,1.255989822731,0.740382983530803,0,0.667380422864376,1.17935397067922,0.449724224769707,0.405720242777006,0.241177159752417,1.2731292589071,0.863088412352432,1.29708181420028,0.549122826376163,2.87536413054709,1.11642284300551,0.312037673114561,1.01031551178845,0.717589654087649,0.964887042726734,2.77129785249907,0.757965647081939,0.651859905768103,0.509235257325564,1.17345124144251,1.17254380209271,0.952174563544055,1.95133647857799,2.36452716159286,1.10732344824387,3.82691444777969,2.78567635016755,1.89953480052485,3.03763023021174,3.01582567878545,0,0.983528546038072,1.10374698521893,1.9266070798535,1.99259867206745,0,10.856249869788,2.2085575359138,1.56175497718655,2.36965737506079,0.955875191810208,0.891194696329576,2.26461224631066,4.45291771842384,2.04579100537918,1.18586333383957,0.963963949265421,0.709700426041343,1.24645922567079,1.62886959353576,2.14461159864296,0,1.21390318077491,0.302323556964751,0.188605079755898,0.885905678642318,0.922305443831782,1.80899805217755,0,2.85197902707777,1.58018378967908,2.10837217149998,2.06271086496374,0.340439605753788,0.720244376125241,0.517434735131018,0.214337035031592,0.886701168211368,0.356737635204141,0.493647061806363,1.2178597964584,1.64270195644597,1.27099242518292,0.441056796109924,2.30840754118072,1.45317984026315,1.68876189798836,0.358117032009409,0.820704498725306,3.20628920292836,2.22510362412612,0.683483523191411,0.619160603889667,0.555583582109135,0.376736914009382,0.683471138605126,0,2.71965487990169,2.09927178485487,2.3493995546752,0.954670618015114,0.316335993581135,0.609958401380546,0.432021363287205,0.209088296014469,0,0.674321731924103,1.57041565878138,0.785267825952089,1.68499465279331,4.34937519160848,0.56369293868419,0.747582730219894,0.66183396182839,1.36115831840833,1.29159823477731,2.19642963138012,2.58185925020659,3.1249052362548,2.09718688851422,0.241584120826006,1.44015003128933,1.26404448251271,1.41907650703115,1.1298205288131,1.03936658382236,2.50637373934474,1.78813219303138,3.00488623799922,1.77227432609493,2.92802704849628,2.209997392995,3.7305688500631,3.8983152295901,4.13710919053417,4.55819918508119,13.1503622496823,0.221985953374065,0.358855426437903,1.17519231454855,1.35232715822533,1.68914227906064,2.38097111547445,0.857473516316263,1.00314420807073,0.564751842617067,2.30162618253588,2.29158205375759,1.54667864109319,0.685082519770642,0,1.35004500046361,1.35096360967266,1.35942722695261,2.07104124700728,0.31136204275253,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,1.47074806760011,3.11145418922261,1.44224540067226,3.20919209591815,1.26348605881899,3.29523089857312,1.88626341386076,1.87283014939765,2.30490548657529,2.52716063404698,1.90517476513229,3.01299247456624,1.92909220463705,0,1.03039244094078,2.05721551431249,1.4198064492747,0.953744759789284,2.18019624948493,1.50575008664529,1.94613598150856,1.28049581010941,1.05227884575137,2.30866993537965,1.12228454331548,2.60997039873183,2.9551344712669,1.22769312950907,2.16911577660352,2.70069255373598,1.49886346762768,3.50897412668113,2.79332370262788,2.10417165275728,3.97064554415128,3.2461496986859|short_description=p2@Trak1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67095 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BWK8,uniprot:A2VDH1,uniprot:Q80TL6 | |||
|association_with_transcript=27bp_to_uc009sda.1,uc009sdb.1,uc009sdc.1,uc009sdd.1_5end | |||
|cluster_id=chr9:121206679..121206692,+ | |||
|description=CAGE_peak_2_at_Trak1_5end | |||
|id=chr9:121206679..121206692,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!9.95e-09!18;UBERON:0000948!9.95e-09!18;UBERON:0005498!9.95e-09!18;UBERON:0004140!9.95e-09!18;UBERON:0009881!9.95e-09!18;UBERON:0004141!9.95e-09!18;UBERON:0003084!9.95e-09!18;UBERON:0007005!9.95e-09!18;UBERON:0004139!9.95e-09!18;UBERON:0004291!9.95e-09!18;UBERON:0004535!4.99e-07!23;UBERON:0001009!4.99e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.03e-09,18;UBERON:0000948,8.03e-09,18;UBERON:0005498,8.03e-09,18;UBERON:0004140,8.03e-09,18;UBERON:0009881,8.03e-09,18;UBERON:0004141,8.03e-09,18;UBERON:0003084,8.03e-09,18;UBERON:0007005,8.03e-09,18;UBERON:0004139,8.03e-09,18;UBERON:0004291,8.03e-09,18;UBERON:0004535,3.10e-07,23;UBERON:0001009,3.10e-07,23 | |||
|phase1_expression=2.24208385946712,14.3079917132138,18.1999695755814,20.5675663688644,34.0609096363516,4.19698179779725,3.73780224952841,1.03298658753261,1.83025338797167,1.40438715793196,0.171217968225505,0.319088635981346,0.342401459862411,0.699363219351979,0,0.404950534779652,1.39912375625629,0.946386496074713,1.50825876966313,3.81950686618227,1.61582251287033,0.893618560807968,1.56719873483361,1.11994695955385,1.37645568640302,9.76194338995534,9.04600191934057,3.23206849028834,2.09025761402011,3.52842181663903,1.55211357458713,0,0,0,2.02196133825892,0.831173226792462,2.45003227514843,0.837063261473815,0,1.57057123192139,0.588231488031014,0,0.485510353031154,0.377690453926732,0.608261587317087,0.367093504323363,0,1.52617609466313,2.63623419281366,1.55543919259427,0.699932108126813,1.43752564364972,2.51673909086605,0.725362142011344,2.35265659399725,4.11615097657515,3.43840127926508,4.64104883049698,1.01158230429799,0.528990979272033,1.26766280701236,1.0165335962074,0.889294796111139,0,0,0,0.898800331555214,3.45796474789399,2.90330914463737,2.29510095163874,1.47227472945967,3.42781181284564,0.883474163806454,1.10241719293459,0.575072826109418,0,0,2.42605942361857,1.99688493233117,1.31886287730194,1.18933936683133,1.56274011167028,1.11673199600552,1.12552522006336,1.22238598221448,0.883885756421003,0.711858403995515,1.3047961207771,0.605809546665472,0.68014404096107,4.34796733052517,0,1.3599426674155,2.15881276655127,0.649776417447669,0.896053774194671,4.21333260395256,0.340860645156116,1.29893002301434,0.70667914902068,0.985903938436763,2.56652954828636,2.54805239706646,21.3320010945999,0.216491041011214,0,0,2.51204535381932,0.776813650941515,0.593768556259299,0.693941307064543,0.304465478312141,0.230615497256059,0.60289056221049,0.823120949949934,0.879666139307728,1.48316980640624,4.04878199375753,1.76922110389975,4.52947179852746,5.96272099843063,4.84875253135222,0,2.92780797011547,4.39838084308256,4.34276993854605,1.55759661857696,0.599902730993408,1.39777249780371,1.19832511523858,0.915001205637253,0.879580464790051,0.347648640384553,0.767146371990992,1.45451631191692,1.46017136760982,2.24046600470696,1.99051152976149,0.758168275301024,3.57751155007006,0.520481771850815,0.919608417733892,0.720248519221397,0.90422890701429,0.340182495756639,0.896796041993948,1.21812241927647,2.84573707812917,0.215567992932842,0.378212160335639,0.351902248327898,1.09597866213787,0.834141747676794,2.089512999133,1.4404749548556,0.199034266818493,0.702213187313235,1.28673953557358,1.13665399758237,1.44988040774851,0.938104239924385,2.34080679899319,2.84093682702252,2.55793501271625,3.70241070929708,7.20855228726264,5.90201483079162,6.53885917256149,12.0128690436841,16.4167464079095,29.8333219128749,27.7779976108131,26.5655639502171,25.4992195644706,0.420579897128254,1.54356918568927,7.26921322564356,4.23120906661671,0.426576501070468,0.232236671860439,0.515469845288373,1.00841762311671,0.889512175379481,1.52180500890047,2.84717436926707,0.988193728344065,1.25667604400135,1.1937388322469,1.75467678407208,3.59527763461689,2.80979464837102,2.98711909881551,0.189667900953082,0.456994050438915,0,0.407302655690628,0.775809948670503,0.701358198903186,1.20149420536089,1.62371162777562,1.255989822731,0.740382983530803,0,0.667380422864376,1.17935397067922,0.449724224769707,0.405720242777006,0.241177159752417,1.2731292589071,0.863088412352432,1.29708181420028,0.549122826376163,2.87536413054709,1.11642284300551,0.312037673114561,1.01031551178845,0.717589654087649,0.964887042726734,2.77129785249907,0.757965647081939,0.651859905768103,0.509235257325564,1.17345124144251,1.17254380209271,0.952174563544055,1.95133647857799,2.36452716159286,1.10732344824387,3.82691444777969,2.78567635016755,1.89953480052485,3.03763023021174,3.01582567878545,0,0.983528546038072,1.10374698521893,1.9266070798535,1.99259867206745,0,10.856249869788,2.2085575359138,1.56175497718655,2.36965737506079,0.955875191810208,0.891194696329576,2.26461224631066,4.45291771842384,2.04579100537918,1.18586333383957,0.963963949265421,0.709700426041343,1.24645922567079,1.62886959353576,2.14461159864296,0,1.21390318077491,0.302323556964751,0.188605079755898,0.885905678642318,0.922305443831782,1.80899805217755,0,2.85197902707777,1.58018378967908,2.10837217149998,2.06271086496374,0.340439605753788,0.720244376125241,0.517434735131018,0.214337035031592,0.886701168211368,0.356737635204141,0.493647061806363,1.2178597964584,1.64270195644597,1.27099242518292,0.441056796109924,2.30840754118072,1.45317984026315,1.68876189798836,0.358117032009409,0.820704498725306,3.20628920292836,2.22510362412612,0.683483523191411,0.619160603889667,0.555583582109135,0.376736914009382,0.683471138605126,0,2.71965487990169,2.09927178485487,2.3493995546752,0.954670618015114,0.316335993581135,0.609958401380546,0.432021363287205,0.209088296014469,0,0.674321731924103,1.57041565878138,0.785267825952089,1.68499465279331,4.34937519160848,0.56369293868419,0.747582730219894,0.66183396182839,1.36115831840833,1.29159823477731,2.19642963138012,2.58185925020659,3.1249052362548,2.09718688851422,0.241584120826006,1.44015003128933,1.26404448251271,1.41907650703115,1.1298205288131,1.03936658382236,2.50637373934474,1.78813219303138,3.00488623799922,1.77227432609493,2.92802704849628,2.209997392995,3.7305688500631,3.8983152295901,4.13710919053417,4.55819918508119,13.1503622496823,0.221985953374065,0.358855426437903,1.17519231454855,1.35232715822533,1.68914227906064,2.38097111547445,0.857473516316263,1.00314420807073,0.564751842617067,2.30162618253588,2.29158205375759,1.54667864109319,0.685082519770642,0,1.35004500046361,1.35096360967266,1.35942722695261,2.07104124700728,0.31136204275253,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,1.47074806760011,3.11145418922261,1.44224540067226,3.20919209591815,1.26348605881899,3.29523089857312,1.88626341386076,1.87283014939765,2.30490548657529,2.52716063404698,1.90517476513229,3.01299247456624,1.92909220463705,0,1.03039244094078,2.05721551431249,1.4198064492747,0.953744759789284,2.18019624948493,1.50575008664529,1.94613598150856,1.28049581010941,1.05227884575137,2.30866993537965,1.12228454331548,2.60997039873183,2.9551344712669,1.22769312950907,2.16911577660352,2.70069255373598,1.49886346762768,3.50897412668113,2.79332370262788,2.10417165275728,3.97064554415128,3.2461496986859 | |||
|short_description=p2@Trak1 | |||
}} |
Revision as of 18:14, 4 August 2015
Short description: | p2@Trak1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Trak1_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_uc009sda.1, uc009sdb.1, uc009sdc.1, uc009sdd.1_5end |
EntrezGene: | 67095 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 8.03e-09 | 18 |
heart | 8.03e-09 | 18 |
primitive heart tube | 8.03e-09 | 18 |
primary heart field | 8.03e-09 | 18 |
anterior lateral plate mesoderm | 8.03e-09 | 18 |
heart tube | 8.03e-09 | 18 |
heart primordium | 8.03e-09 | 18 |
cardiac mesoderm | 8.03e-09 | 18 |
cardiogenic plate | 8.03e-09 | 18 |
heart rudiment | 8.03e-09 | 18 |
cardiovascular system | 3.10e-07 | 23 |
circulatory system | 3.10e-07 | 23 |