FFCP PHASE1:Mm9::chr4:132725553..132725558,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2056|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:132725553..132725558,-|id=chr4:132725553..132725558,-|ontology_enrichment_celltype=CL:0000988!1.82e-13!32;CL:0002032!1.82e-13!32;CL:0000037!1.82e-13!32;CL:0000566!1.82e-13!32;CL:0000837!1.82e-13!32;CL:0002320!5.78e-10!46;CL:0000134!5.78e-10!46;CL:0000838!5.96e-09!12;CL:0002031!9.21e-09!25;CL:0000738!3.36e-08!17;CL:0002087!3.36e-08!17;CL:0000219!3.93e-08!54;CL:0000542!5.19e-08!13;CL:0000051!5.19e-08!13;CL:0000084!5.55e-08!11;CL:0000827!5.55e-08!11;CL:0000049!6.88e-07!19;CL:0000791!7.56e-07!9;CL:0000789!7.56e-07!9;CL:0002420!7.56e-07!9;CL:0002419!7.56e-07!9;CL:0000790!7.56e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,2.30e-22,32;CL:0002032,2.30e-22,32;CL:0000037,2.30e-22,32;CL:0000837,2.30e-22,32;CL:0000049,5.54e-16,19;CL:0002320,7.97e-15,46;CL:0000134,7.97e-15,46;CL:0000219,2.88e-12,54;CL:0000034,1.10e-10,97;CL:0000723,3.73e-10,91;CL:0000048,3.73e-10,91;CL:0000557,9.16e-10,7;CL:0002031,3.52e-09,25;CL:0000763,1.17e-08,16;CL:0000838,2.92e-08,12;CL:0000738,3.95e-08,17;CL:0002087,3.95e-08,17;CL:0000542,1.31e-07,13;CL:0000051,1.31e-07,13;CL:0000791,2.25e-07,9;CL:0000789,2.25e-07,9;CL:0002420,2.25e-07,9;CL:0002419,2.25e-07,9;CL:0000790,2.25e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,7.64e-14,3;DOID:4045,7.64e-14,3;DOID:0050686,3.89e-07,6|ontology_enrichment_uberon=UBERON:0002193!4.91e-18!48;UBERON:0002390!3.82e-17!45;UBERON:0003061!3.82e-17!45;UBERON:0002405!2.64e-12!70;UBERON:0004177!6.63e-11!29;UBERON:0002384!5.78e-10!46;UBERON:0003081!6.17e-09!88;UBERON:0006562!9.12e-08!24;UBERON:0001557!9.12e-08!24;UBERON:0001042!9.12e-08!24;UBERON:0008814!9.12e-08!24;UBERON:0009145!9.12e-08!24;UBERON:0000065!1.70e-07!41;UBERON:0001004!3.69e-07!42;UBERON:0002370!3.72e-07!23;UBERON:0000974!3.72e-07!23;UBERON:0004807!3.72e-07!23;UBERON:0005058!3.72e-07!23;UBERON:0003351!3.72e-07!23;UBERON:0009113!3.72e-07!23;UBERON:0003295!3.72e-07!23;UBERON:0009722!3.72e-07!23;UBERON:0005562!3.72e-07!23;UBERON:0007690!3.72e-07!23;UBERON:0002371!4.15e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.97e-15,46;UBERON:0002204,3.26e-09,32;UBERON:0002371,1.17e-08,16|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.645616617207881,1.40788722151667,0.468129052643987,0.34243593645101,0,2.39681021903688,0.0874204024189974,1.33243904726265,0.607425802169478,0,0.630924330716475,1.50825876966313,0,0,0.0992909512008853,0.783599367416806,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,6.27797446105362,3.1253413780952,5.75876118371178,5.29408339227913,0,3.39857247121808,0,0,0,0.782391344348039,0,0,0,0,0,2.18117387875057,1.45072428402269,8.06625117941913,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0,0,0.768436610643109,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.969750506270444,0,0,0,0,1.55759661857696,2.39961092397363,2.66847476853436,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,2.31613116403244,2.84163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.578596234326046,0,2.71952841909355,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0.412773735926445,0.370389054739423,0.565105371014073,0.683471138605126,0.228778173206523,0.509935289981566,1.53946597556024,0.690999869022119,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.120195449519969,0.443068581523732,0.302899349844443,0.15241361331,0.302478555410522,0.194915761479505,0.673482891482306,0.467507608726276,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.476872379894642,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr4:132725553..132725558,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2056 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:132725553..132725558,- | |||
|description=CAGE_peak_at_chr4:132725553..132725558,- | |||
|id=chr4:132725553..132725558,- | |||
|ontology_enrichment_celltype=CL:0000988!1.82e-13!32;CL:0002032!1.82e-13!32;CL:0000037!1.82e-13!32;CL:0000566!1.82e-13!32;CL:0000837!1.82e-13!32;CL:0002320!5.78e-10!46;CL:0000134!5.78e-10!46;CL:0000838!5.96e-09!12;CL:0002031!9.21e-09!25;CL:0000738!3.36e-08!17;CL:0002087!3.36e-08!17;CL:0000219!3.93e-08!54;CL:0000542!5.19e-08!13;CL:0000051!5.19e-08!13;CL:0000084!5.55e-08!11;CL:0000827!5.55e-08!11;CL:0000049!6.88e-07!19;CL:0000791!7.56e-07!9;CL:0000789!7.56e-07!9;CL:0002420!7.56e-07!9;CL:0002419!7.56e-07!9;CL:0000790!7.56e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.30e-22,32;CL:0002032,2.30e-22,32;CL:0000037,2.30e-22,32;CL:0000837,2.30e-22,32;CL:0000049,5.54e-16,19;CL:0002320,7.97e-15,46;CL:0000134,7.97e-15,46;CL:0000219,2.88e-12,54;CL:0000034,1.10e-10,97;CL:0000723,3.73e-10,91;CL:0000048,3.73e-10,91;CL:0000557,9.16e-10,7;CL:0002031,3.52e-09,25;CL:0000763,1.17e-08,16;CL:0000838,2.92e-08,12;CL:0000738,3.95e-08,17;CL:0002087,3.95e-08,17;CL:0000542,1.31e-07,13;CL:0000051,1.31e-07,13;CL:0000791,2.25e-07,9;CL:0000789,2.25e-07,9;CL:0002420,2.25e-07,9;CL:0002419,2.25e-07,9;CL:0000790,2.25e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.64e-14,3;DOID:4045,7.64e-14,3;DOID:0050686,3.89e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.91e-18!48;UBERON:0002390!3.82e-17!45;UBERON:0003061!3.82e-17!45;UBERON:0002405!2.64e-12!70;UBERON:0004177!6.63e-11!29;UBERON:0002384!5.78e-10!46;UBERON:0003081!6.17e-09!88;UBERON:0006562!9.12e-08!24;UBERON:0001557!9.12e-08!24;UBERON:0001042!9.12e-08!24;UBERON:0008814!9.12e-08!24;UBERON:0009145!9.12e-08!24;UBERON:0000065!1.70e-07!41;UBERON:0001004!3.69e-07!42;UBERON:0002370!3.72e-07!23;UBERON:0000974!3.72e-07!23;UBERON:0004807!3.72e-07!23;UBERON:0005058!3.72e-07!23;UBERON:0003351!3.72e-07!23;UBERON:0009113!3.72e-07!23;UBERON:0003295!3.72e-07!23;UBERON:0009722!3.72e-07!23;UBERON:0005562!3.72e-07!23;UBERON:0007690!3.72e-07!23;UBERON:0002371!4.15e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.97e-15,46;UBERON:0002204,3.26e-09,32;UBERON:0002371,1.17e-08,16 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.645616617207881,1.40788722151667,0.468129052643987,0.34243593645101,0,2.39681021903688,0.0874204024189974,1.33243904726265,0.607425802169478,0,0.630924330716475,1.50825876966313,0,0,0.0992909512008853,0.783599367416806,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,6.27797446105362,3.1253413780952,5.75876118371178,5.29408339227913,0,3.39857247121808,0,0,0,0.782391344348039,0,0,0,0,0,2.18117387875057,1.45072428402269,8.06625117941913,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0,0,0.768436610643109,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.969750506270444,0,0,0,0,1.55759661857696,2.39961092397363,2.66847476853436,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,2.31613116403244,2.84163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.578596234326046,0,2.71952841909355,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0.412773735926445,0.370389054739423,0.565105371014073,0.683471138605126,0.228778173206523,0.509935289981566,1.53946597556024,0.690999869022119,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.120195449519969,0.443068581523732,0.302899349844443,0.15241361331,0.302478555410522,0.194915761479505,0.673482891482306,0.467507608726276,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.476872379894642,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr4:132725553..132725558,- | |||
}} |
Latest revision as of 21:28, 4 August 2015
Short description: | p@chr4:132725553..132725558, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:132725553..132725558, - |
Coexpression cluster: | MCL_coexpression_mm9:2056 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.30e-22 | 32 |
hematopoietic oligopotent progenitor cell | 2.30e-22 | 32 |
hematopoietic stem cell | 2.30e-22 | 32 |
hematopoietic multipotent progenitor cell | 2.30e-22 | 32 |
common myeloid progenitor | 5.54e-16 | 19 |
connective tissue cell | 7.97e-15 | 46 |
mesenchymal cell | 7.97e-15 | 46 |
motile cell | 2.88e-12 | 54 |
stem cell | 1.10e-10 | 97 |
somatic stem cell | 3.73e-10 | 91 |
multi fate stem cell | 3.73e-10 | 91 |
granulocyte monocyte progenitor cell | 9.16e-10 | 7 |
hematopoietic lineage restricted progenitor cell | 3.52e-09 | 25 |
myeloid cell | 1.17e-08 | 16 |
lymphoid lineage restricted progenitor cell | 2.92e-08 | 12 |
leukocyte | 3.95e-08 | 17 |
nongranular leukocyte | 3.95e-08 | 17 |
lymphocyte | 1.31e-07 | 13 |
common lymphoid progenitor | 1.31e-07 | 13 |
mature alpha-beta T cell | 2.25e-07 | 9 |
alpha-beta T cell | 2.25e-07 | 9 |
immature T cell | 2.25e-07 | 9 |
mature T cell | 2.25e-07 | 9 |
immature alpha-beta T cell | 2.25e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.97e-15 | 46 |
musculoskeletal system | 3.26e-09 | 32 |
bone marrow | 1.17e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.64e-14 | 3 |
muscle cancer | 7.64e-14 | 3 |
organ system cancer | 3.89e-07 | 6 |