FFCP PHASE1:Mm9::chr10:89148964..89148989,-: Difference between revisions
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{{FFCP|EntrezGene=213326|HGNC=|MCL_coexpression_id=163|UniProt=|association_with_transcript=18bp_to_ENSMUST00000174429_5end|description=CAGE_peak_2_at_Scyl2_5end|id=chr10:89148964..89148989,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.38e-12!130;UBERON:0000925!1.38e-12!130;UBERON:0006595!1.38e-12!130;UBERON:0001007!6.96e-12!128;UBERON:0001555!6.96e-12!128;UBERON:0007026!6.96e-12!128;UBERON:0004921!2.59e-11!126;UBERON:0004185!2.59e-11!126;UBERON:0004923!2.82e-07!24;UBERON:0000344!5.51e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.96e-13,118;UBERON:0000925,1.96e-13,118;UBERON:0006595,1.96e-13,118;UBERON:0001007,1.04e-12,116;UBERON:0001555,1.04e-12,116;UBERON:0007026,1.04e-12,116;UBERON:0004921,4.03e-12,114;UBERON:0000160,1.11e-08,31;UBERON:0005409,5.25e-08,47;UBERON:0004923,2.82e-07,24;UBERON:0000344,5.51e-07,15;UBERON:0003929,9.89e-07,55|phase1_expression=4.48416771893423,25.8241801653127,28.2099528421512,14.215817931421,13.5241847085514,17.2915650069246,8.64366770203445,5.29405626110463,28.0169557081817,28.3218076849612,6.33506482434368,6.62108919661292,4.45121897821135,4.10875891369288,2.99798785634096,5.4668322195253,2.79824751251259,3.94327706697797,2.60517423850904,4.66828616977833,4.84746753861098,4.36880185283895,2.35079810225042,8.31960598525715,7.11168771308227,25.8404383851759,20.2458138194765,17.453169847557,11.5914285868388,13.1055667475164,11.9734475753865,1.90509202037889,3.69038872550742,0,7.79899373328441,4.48833542467929,6.12508068787107,40.59756818148,23.440060335714,28.7938059185589,51.1761394586982,49.8623204019665,35.9277661243054,6.54663453473002,5.98123894195136,4.9557623083654,0,0.218025156380447,1.09843091367236,1.55543919259427,1.95980990275508,0,2.34895648480831,8.70434570413613,2.68875039313971,2.57259436035947,2.57880095944881,2.57836046138721,5.05791152148994,2.11596391708813,3.80298842103708,1.69422266034566,0.889294796111139,0.449949858640699,0.988866362566974,0,0.599200221036809,1.15265491596466,4.04389488003063,3.91517221161903,5.04779907243317,2.57085885963423,1.32521124570968,4.65465037016825,5.65488279007595,2.75765635983006,4.40463523997555,3.31987079021488,3.5329502648936,8.44072241473241,9.78917786545783,4.16730696445408,2.23346399201105,7.87867654044352,3.51435969886663,2.06240009831567,3.13217697758026,6.15118171223492,2.72614295999463,2.49386148352392,9.56552812715537,3.44169550792555,9.51959867190851,5.39703191637817,5.84798775702902,6.72040330646003,5.33688796500657,4.09032774187339,1.29893002301434,3.5333957451034,6.05626705039726,1.28326477414318,0,0,7.57718643539249,6.58735650235256,5.05524445014783,9.7056297761201,11.3932668804756,6.53145411885229,3.99016251562112,3.34912026143355,4.84292544237723,3.3158980921577,6.58496759959947,5.27799683584637,7.41584903203122,7.66376591675532,0.884610551949874,3.07357014900077,3.5334642953663,6.30337829075789,1.86391761218122,7.90508151931177,6.70229461803056,15.0719662573069,10.4239158320151,8.99854096490112,7.49714339731082,5.24267237916879,5.03250663100489,6.28271760564322,6.08385120672968,6.13717097592793,7.2725815595846,5.353961681236,3.66621709861139,6.46916247172484,6.06534620240819,15.1518136238261,6.8963834770233,5.28774840196988,3.60124259610698,4.06903008156431,5.91917542616552,4.61209393025459,3.18585863503078,9.8307280880826,3.44908788692548,4.34943984385984,4.57472922826267,4.82230611340665,5.00485048606076,3.1342694986995,4.93877127379064,6.56813080501028,11.937624184325,4.63226232806487,4.54661599032948,5.79952163099405,3.98694301967864,3.78130329068131,4.26140524053378,4.9191057936851,3.08534225774756,2.79040733700489,5.36546802799238,3.97002164048376,3.45575684818309,3.11918181750281,3.40489000092594,2.77779976108131,3.07370161407471,4.42881181909227,3.15434922846191,7.30622747892919,24.1205711578173,14.8092317331585,6.82522401712749,6.50262681209228,6.05677068213839,5.44545516483025,6.44896327150124,5.89699440948933,12.3377556001573,7.24675400785648,5.7807098024062,4.37704238490532,8.18849165900304,11.6846523125049,9.94235029423593,10.1562049359727,2.0863469104839,4.91268604221834,4.50830942692322,5.09128319613286,3.29719228184964,5.82127305089644,6.57659986092276,7.52811754695971,10.8329122210549,8.14421281883883,11.2651998293117,6.50695912292767,6.09332884850929,6.2961391467759,5.68008339887808,5.788251834058,8.65727896056827,10.3570609482292,11.1873306474774,5.49122826376163,10.0637744569148,5.20997326735905,9.67316786655138,7.57736633841335,8.25228102200796,11.0962009913574,7.57488079683079,3.03186258832776,3.42226450528254,4.58311731593008,4.22442446919304,3.85264392116176,7.14130922658041,7.80534591431195,5.04432461139811,3.5434350343804,6.53764551495697,4.7520361267564,5.87128938344045,6.79850575333104,1.50791283939272,2.71952841909355,12.7858710984949,17.9358885098076,4.17431533968259,5.97779601620236,1.80328439914343,2.7771801992481,3.15508219416257,3.5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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:213326 | |||
|HGNC= | |||
|MCL_coexpression_id=163 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=18bp_to_ENSMUST00000174429_5end | |||
|cluster_id=chr10:89148964..89148989,- | |||
|description=CAGE_peak_2_at_Scyl2_5end | |||
|id=chr10:89148964..89148989,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.38e-12!130;UBERON:0000925!1.38e-12!130;UBERON:0006595!1.38e-12!130;UBERON:0001007!6.96e-12!128;UBERON:0001555!6.96e-12!128;UBERON:0007026!6.96e-12!128;UBERON:0004921!2.59e-11!126;UBERON:0004185!2.59e-11!126;UBERON:0004923!2.82e-07!24;UBERON:0000344!5.51e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.96e-13,118;UBERON:0000925,1.96e-13,118;UBERON:0006595,1.96e-13,118;UBERON:0001007,1.04e-12,116;UBERON:0001555,1.04e-12,116;UBERON:0007026,1.04e-12,116;UBERON:0004921,4.03e-12,114;UBERON:0000160,1.11e-08,31;UBERON:0005409,5.25e-08,47;UBERON:0004923,2.82e-07,24;UBERON:0000344,5.51e-07,15;UBERON:0003929,9.89e-07,55 | |||
|phase1_expression=4.48416771893423,25.8241801653127,28.2099528421512,14.215817931421,13.5241847085514,17.2915650069246,8.64366770203445,5.29405626110463,28.0169557081817,28.3218076849612,6.33506482434368,6.62108919661292,4.45121897821135,4.10875891369288,2.99798785634096,5.4668322195253,2.79824751251259,3.94327706697797,2.60517423850904,4.66828616977833,4.84746753861098,4.36880185283895,2.35079810225042,8.31960598525715,7.11168771308227,25.8404383851759,20.2458138194765,17.453169847557,11.5914285868388,13.1055667475164,11.9734475753865,1.90509202037889,3.69038872550742,0,7.79899373328441,4.48833542467929,6.12508068787107,40.59756818148,23.440060335714,28.7938059185589,51.1761394586982,49.8623204019665,35.9277661243054,6.54663453473002,5.98123894195136,4.9557623083654,0,0.218025156380447,1.09843091367236,1.55543919259427,1.95980990275508,0,2.34895648480831,8.70434570413613,2.68875039313971,2.57259436035947,2.57880095944881,2.57836046138721,5.05791152148994,2.11596391708813,3.80298842103708,1.69422266034566,0.889294796111139,0.449949858640699,0.988866362566974,0,0.599200221036809,1.15265491596466,4.04389488003063,3.91517221161903,5.04779907243317,2.57085885963423,1.32521124570968,4.65465037016825,5.65488279007595,2.75765635983006,4.40463523997555,3.31987079021488,3.5329502648936,8.44072241473241,9.78917786545783,4.16730696445408,2.23346399201105,7.87867654044352,3.51435969886663,2.06240009831567,3.13217697758026,6.15118171223492,2.72614295999463,2.49386148352392,9.56552812715537,3.44169550792555,9.51959867190851,5.39703191637817,5.84798775702902,6.72040330646003,5.33688796500657,4.09032774187339,1.29893002301434,3.5333957451034,6.05626705039726,1.28326477414318,0,0,7.57718643539249,6.58735650235256,5.05524445014783,9.7056297761201,11.3932668804756,6.53145411885229,3.99016251562112,3.34912026143355,4.84292544237723,3.3158980921577,6.58496759959947,5.27799683584637,7.41584903203122,7.66376591675532,0.884610551949874,3.07357014900077,3.5334642953663,6.30337829075789,1.86391761218122,7.90508151931177,6.70229461803056,15.0719662573069,10.4239158320151,8.99854096490112,7.49714339731082,5.24267237916879,5.03250663100489,6.28271760564322,6.08385120672968,6.13717097592793,7.2725815595846,5.353961681236,3.66621709861139,6.46916247172484,6.06534620240819,15.1518136238261,6.8963834770233,5.28774840196988,3.60124259610698,4.06903008156431,5.91917542616552,4.61209393025459,3.18585863503078,9.8307280880826,3.44908788692548,4.34943984385984,4.57472922826267,4.82230611340665,5.00485048606076,3.1342694986995,4.93877127379064,6.56813080501028,11.937624184325,4.63226232806487,4.54661599032948,5.79952163099405,3.98694301967864,3.78130329068131,4.26140524053378,4.9191057936851,3.08534225774756,2.79040733700489,5.36546802799238,3.97002164048376,3.45575684818309,3.11918181750281,3.40489000092594,2.77779976108131,3.07370161407471,4.42881181909227,3.15434922846191,7.30622747892919,24.1205711578173,14.8092317331585,6.82522401712749,6.50262681209228,6.05677068213839,5.44545516483025,6.44896327150124,5.89699440948933,12.3377556001573,7.24675400785648,5.7807098024062,4.37704238490532,8.18849165900304,11.6846523125049,9.94235029423593,10.1562049359727,2.0863469104839,4.91268604221834,4.50830942692322,5.09128319613286,3.29719228184964,5.82127305089644,6.57659986092276,7.52811754695971,10.8329122210549,8.14421281883883,11.2651998293117,6.50695912292767,6.09332884850929,6.2961391467759,5.68008339887808,5.788251834058,8.65727896056827,10.3570609482292,11.1873306474774,5.49122826376163,10.0637744569148,5.20997326735905,9.67316786655138,7.57736633841335,8.25228102200796,11.0962009913574,7.57488079683079,3.03186258832776,3.42226450528254,4.58311731593008,4.22442446919304,3.85264392116176,7.14130922658041,7.80534591431195,5.04432461139811,3.5434350343804,6.53764551495697,4.7520361267564,5.87128938344045,6.79850575333104,1.50791283939272,2.71952841909355,12.7858710984949,17.9358885098076,4.17431533968259,5.97779601620236,1.80328439914343,2.7771801992481,3.15508219416257,3.51394869866975,1.93881057959519,2.38968797952552,2.67358408898873,1.69845918473299,1.61924280669958,2.04579100537918,1.58115111178609,7.39039027770156,6.81312408999689,4.62970569534864,4.72372182125371,8.74341651754438,3.98235415019888,6.5550771761845,3.62788268357701,4.71512699389745,3.54362271456927,5.22639751504677,7.75284879504663,4.36240475373007,4.63446591900138,4.10847785316561,8.4334886859999,6.18813259489121,11.9153862013826,5.40183282093931,3.49268446213437,6.43011105094777,5.49754724291048,7.31312152168489,7.0756078858912,2.74018454203139,8.21350978222986,8.89694697628045,10.5853631066382,7.74965388824956,4.03661066739764,7.17723806645055,8.11731939221328,7.71462228801788,8.74442509889552,4.45020724825223,6.83483523191411,6.19160603889667,5.55583582109135,4.70921142511728,5.19438065339896,6.40578884978263,10.1987057996313,11.47601909054,12.1615976947893,1.90934123603023,5.852215881251,3.65975040828328,5.83228840437727,6.690825472463,5.8957892211468,4.85511646985355,7.1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| |||
|short_description=p2@Scyl2 | |||
}} |
Revision as of 00:23, 5 August 2015
Short description: | p2@Scyl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Scyl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:163 |
Association with transcript: | 18bp_to_ENSMUST00000174429_5end |
EntrezGene: | 213326 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.96e-13 | 118 |
endoderm | 1.96e-13 | 118 |
presumptive endoderm | 1.96e-13 | 118 |
digestive system | 1.04e-12 | 116 |
digestive tract | 1.04e-12 | 116 |
primitive gut | 1.04e-12 | 116 |
subdivision of digestive tract | 4.03e-12 | 114 |
intestine | 1.11e-08 | 31 |
gastrointestinal system | 5.25e-08 | 47 |
organ component layer | 2.82e-07 | 24 |
mucosa | 5.51e-07 | 15 |
gut epithelium | 9.89e-07 | 55 |